New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5612889	45 (0.760)	6 (0.110)	6/244	NT	11.7%	coding (711/813 nt)	PP_4932	D‑arabinose 1‑dehydrogenase
	?	NC_002947	= 5612906	48 (0.850)					coding (728/813 nt)	PP_4932	D‑arabinose 1‑dehydrogenase

ACCTACAACCTCAACGAACAGGCAGAACGCCCGGTGCTGGACTACGCTGCCGAACACGGCAAGGCCATCCTGGTAAAAA‑AGGCCTTGGCGAGCGGGCATATCTGCCTGGCCCCGGGCGTCGACCCGGTGCAGGCCAGCTTCGAGCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5612740‑5612889 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgctgACGCCCGGGTGGGCGAACAGCAGCTCGAAGCTGGCCTGCACCGGGTCGACGCCCGGGGCCAGGCAGATATGCCCGCTCGCCAAGGCCTTTTTTACCAGGATGGCCTTGCCGTGTTCGGCAGCGTAGTCCAGCACCGGGCGTTCTGC  <  NC_002947/5612906‑5612761                                                                                                                                                                                                                                                                                                           ACCTACAACCTCAACGAACAGGCAGAACGCCCGGTGCTGGACTACGCTGCCGAACACGGCAAGGCCATCCTGGTAAAAA‑AGGCCTTGGCGAGCGGGCATATCTGCCTGGCCCCGGGCGTCGACCCGGTGCAGGCCAGCTTCGAGCTGCT                                                                                                                                                     >  7:38759/1‑149  CCTACAACCTCAACGAACAGGCAGAACGCCCGGTGCTGGACTACGCTGCCGAACACGGCAAGGCCATCCTGGTAAAAA‑AGGCCTTGGCGAGCGGGCATATCTGCCTGGCCCCGGGCGTCGACCCGGTGCAGGCCAGCTTCGAGCTGCTG                                                                                                                                                    >  6:135335/1‑149         CCTCAACGAACAGGCAGAACGCCCGGTGCTGGACTACGCTGCCGAACACGGCAAGGCCATCCTGGTAAAAA‑AGGCCTTGGCGAGCGGGCATATCTGCCTGGCCCCGGGCGTCGACCCGGTGCAGGCCAGCTTCGAGCTGCTGACGCCCG                                                                                                                                             >  7:265859/1‑149                                CGGTGCTGGACTACGCTGCCGAACACGGCAAGGCCATCCTGGTAAAAA‑AGGCCTTGGCGAGCGGGCATATCTGCCTGGCCCCGGGCGTCGACCCGGTGCAGGCCAGCTTCGAGCTGCTGACGCCCGGGTGGGCGAACAGCAGCTCGAAG                                                                                                                      <  8:265859/149‑1                                                    GAACACGGCAAGGCCATCCTGGTAAAAAGAGGCCTTGGCGAGCGGGCATATCTGCCTGGCCCCGGGCGTCGACCCGGTGCAGGCCAGCTTCGAGCTGCTGACGCCCGGGTGGGCGAACAGC                                                                                                                               >  1:215613/1‑121                                                    GAACACGGCAAGGCCATCCTGGTAAAAA‑AGGCCTTGGCGAGCGGGCATATCTGCCTGGCCCCGGGCGTCGACCCGGTGCAGGCCAGCTTCGAGCTGCTGACGCCCGGGTGGGCGAACAGC                                                                                                                               <  2:215613/120‑1                                                          GGCAAGGCCATCCTGGTAAAAA‑AGGCCTTGGCGAGCGGGCATATCTGCCTGGCCCCGGGCGTCGACCCGGTGCAGGCCAGCTTCGAGCTGCTGACGCCCGGGTGGGCGAACAGCAGCT                                                                                                                           <  5:33495/118‑1                                                          GGCAAGGCCATCCTGGTAAAAA‑AGGCCTTGGCGAGCGGGCATATCTGCCTGGCCCCGGGCGTCGACCCGGTGCAGGCCAGCTTCGAGCTGCTGACGCCCGGGTGGGCGAACAGCAGCT                                                                                                                           >  6:33495/1‑118                                                                                                                                                     CTGACGCCCGGGTGGGCGAACAGCAGCTCGAAGCTGGCCTGCACCGGGTCGACGCCCGGGGCCAGGCAGATATGCCCGCTCGCCAAGGCCTTTTTTACCAGGATGGCCTTGCCGTGTTCGGCAGCGTAGTCCAGCACCGGGCGTTCTGC  <  7:60165/149‑1                                                                                                                                                                                                                                                                                                           ACCTACAACCTCAACGAACAGGCAGAACGCCCGGTGCTGGACTACGCTGCCGAACACGGCAAGGCCATCCTGGTAAAAA‑AGGCCTTGGCGAGCGGGCATATCTGCCTGGCCCCGGGCGTCGACCCGGTGCAGGCCAGCTTCGAGCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5612740‑5612889 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgctgACGCCCGGGTGGGCGAACAGCAGCTCGAAGCTGGCCTGCACCGGGTCGACGCCCGGGGCCAGGCAGATATGCCCGCTCGCCAAGGCCTTTTTTACCAGGATGGCCTTGCCGTGTTCGGCAGCGTAGTCCAGCACCGGGCGTTCTGC  <  NC_002947/5612906‑5612761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.