| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5628075 | 91 (1.540) | 5 (0.090) | 4/244 | NT | 5.2% | coding (456/837 nt) | rlmJ | 23S rRNA (adenine(2030)‑N(6))‑methyltransferase |
| ? | NC_002947 | = 5628112 | 94 (1.670) | coding (419/837 nt) | rlmJ | 23S rRNA (adenine(2030)‑N(6))‑methyltransferase | |||||
AGCGAGCGCTGGTCCTTGATCGGGTACCAGATGGCCGCAACGGTCTGGCGCATGCGGCCGATCGCCTCTTTCATGGCCGTGGTGCAGCGTTTGAGCTCATCGGCCTGCTCGAACGGCGGGTCGATCAGCATGATCGCGCGCTTTTCCTGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5627923‑5628075‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaccTGGGTGAAGGCTGGCATGTGCCGCGGGCCTTGCTGCCGGTGCAGGAAAAGCGCGCGATCATGCTGATCGACCCGCCGTTCGAGCAGGCCGATGAGCTCAAACGCTGCACCACGGCCATGAAAGAGGCGATCGGCCGCATGCGC < NC_002947/5628112‑5627970 AGCGAGCGCTGGTCCTTGATCGGGTACCAGATGGCCGCAACGGTCTGGCGCATGCGGCCGATCTCCTCTTTCATGGCCGTGGTGCAGCGTTTGAGCTCATCGGCCTGCTCGAACTGCGCGTCGATCAGCATGATCCCCCGCTTTTCCT > 7:339351/1‑148 gtgtGCGCGGGTCCTTGATCTGGTACCAGATGGCCGCAAGGGTCTGGCGCATGCTGCCGATCGCCTCTTTCATGGCCGTGGTGCAGCGTTTGAGCTCATCGGCCTGCTCGAACGGCGGGTCGATCAGCATGATCGCGCGCTTTTCCTt < 8:339351/144‑2 GCGAGCGCTGGTCCTTGATCGGGTACCAGATGGCCGCAACGGTCTGGCGCATGCGGCCGATCGCCTCTTTCATGGCCGTGGTGCAGCGTTTGAGCTCATCGGCCTGCTCGAACGGCGGGTCGATCAGCATGATCGCGCGCTTTTCCTG > 6:221635/1‑148 CCTTGATCGGGTACCAGATGGCCGCAACGGTCTGGCGCATGCGGCCGATCGCCTCTTTCATGGCCGTGGTGCAGCGTTTGAGCTCATCGGCCTGCTCGAACGGCGGGTCGATCAGCATGATCGCGCGCTTTTCCTGCACCTGGGTGAAG > 6:127512/1‑149 CCTTGATCGGGTACCAGAT‑GCCGCAACGGTCTGGCGCATGCGGCCGATCGCCTCTTTCATGGCCGTGGTGCAGCGTTTGAGCTCATCGGCCTGCTCGAACGGCGGGTCGATCAGCATGATCGCGCGCTTTTCCTGCACCTGGGTGAAGG > 4:370486/1‑149 GCGCATGCGGCCGATCGCCTCTTTCATGGCCGTGGTGCAGCGTTTGAGCTCATCGGCCTGCTCGAACGGCGGGTCGATCAGCATGATCGCGCGCTTTTCCTGCACCTGGGTGAAGGCTGGCATGTGCCGCGGGCCTTGCTGCCGGTGC < 3:370486/148‑1 CGCATGCGGCCGATCGCCTCTTTCATGGCCGTGGTGCAGCGTTTGAGCTCATCGGCCTGCTCGAACGGCGGGTCGATCAGCATGATCGCGCGCTTTTCCTGCACCTGGGTGAAGGCTGGCATGTGCCGCGGGCCTTGCTGCCGGTGCAG < 5:127512/149‑1 CATGAGGCCGATCGCCTCTTTCATGGCCGTGGTGCAGCGTTTGAGCTCATCGGCCTGCTCGAACGGCGGGTCGATCAGCATGATCTCGCGCTTTTCCTGCAACTGGGTGAAGGCTGGCATGTGCCTCGGGCCTTGCTGCCGGTGCAGGA < 2:18625/149‑1 TGCACCTGGGTGAAGGCTGGCATGTGCCGCGGGCCTTGCTGCCGGTGCAGGAAAAGCGCGCGATCATGCTGATCGACCCGCCGTTCGAGCAGGCCGATGAGCTCAAACGCTGCACCACGGCCATGAAAGAGGCGATCGGCCGCATGCGC < 6:162193/149‑1 GCACCTGGGTGAAGGCTGGCATGTGCCGCGGGCCTTGCTGCCGGTGCAGGAAAAGCGCGCGATCATGCTGATCGACCCGCCGTTAGAGCAGGCCGATGAGCTCAAACGCTGCACCACGGCCATGAAAGAGGCGATCGGCCGCATGCGC > 1:88045/1‑148 CACCTGGGTGAAGGCTGGCATGTGCCGCGGGCCTTGCTGCCGGTGCAGGAAAAGCGCGCGATCATGCTGATCGACCCGCCGTTCGAGCAGGCCGATGAGCTCAAACGCTGCACCACGGCCATGAAAGAGGCGATCGGCCGCATGCGC > 8:103576/1‑147 AGCGAGCGCTGGTCCTTGATCGGGTACCAGATGGCCGCAACGGTCTGGCGCATGCGGCCGATCGCCTCTTTCATGGCCGTGGTGCAGCGTTTGAGCTCATCGGCCTGCTCGAACGGCGGGTCGATCAGCATGATCGCGCGCTTTTCCTGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5627923‑5628075‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaccTGGGTGAAGGCTGGCATGTGCCGCGGGCCTTGCTGCCGGTGCAGGAAAAGCGCGCGATCATGCTGATCGACCCGCCGTTCGAGCAGGCCGATGAGCTCAAACGCTGCACCACGGCCATGAAAGAGGCGATCGGCCGCATGCGC < NC_002947/5628112‑5627970 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |