New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5783372	70 (1.180)	4 (0.070)	4/246	NT	5.9%	coding (1847/3309 nt)	kefA	intermediate mechanosensitive channel protein
	?	NC_002947	= 5783399	61 (1.070)					coding (1874/3309 nt)	kefA	intermediate mechanosensitive channel protein

GCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5783224‑5783372 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgACCAGTGCCAGCACCACAGTGCCCAGGCGGCGAACCCAGCCGCGCAGGAACTCGACCTGCGGTTTGTGCCAGCGGAAGTGGACTTCCGCCACGCCACCGGGTGCGAGGATACGGTAGGCGGTGTAGAACACCAGCCAGGCCTGGGCCA  <  NC_002947/5783399‑5783252                                                                                                                                                                                                                                                                                                           GCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCG                                                                                                                                                      >  6:53579/1‑149   CAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTC                                                                                                                                                          >  3:197153/1‑143   CAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTC                                                                                                                                                          <  4:197153/143‑1                                     GCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGACCAGTGCCAGCACCACAGTGCCCAGGCGGCGAACC                                                                                                                  >  4:124235/1‑149                                       CTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGACCAGTGCCAGCACCACAGTGCCCAGGCGGCGAACCCA                                                                                                                <  3:364955/149‑1                                                    TACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGACCAGTGCCAGCACCACAGTGCCCAGGCGGC                                                                                                                       <  7:93769/129‑1                                                    TACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGACCAGTGCCAGCACCACAGTGCCCAGGCGGC                                                                                                                       >  8:93769/1‑129                                                                                                                                                 CGCCGACCAGTGCCAGCACCACAGTGCCCAGGCGGCGAACCCAGCCGCGCAGGAACTCGACCTGCGGTTTGTGCCAGCGGAAGTGGACTTCCGCCACGCCACCGGGTGCGAGGATACGGTAGGCGGTGTAGAACACCAGCCAGGCCTGG      <  4:193746/149‑1                                                                                                                                                    CGACCAGTGCCAGCACCACAGTGCCCAGGTGGCGAACCCAGCCGCGCAGGAACTCGACCTGCGGTTTGTGCCAGCGGAAGTGGACTTCCGCCACGCCACCGGGTGCGAGGATACGGTAGGCGGTGTAGAACACCAGCCAGGCCTGGGC    >  1:24088/1‑148                                                                                                                                                     GACCAGTGCCAGCACCACAGTGCCCAGGCGGCGAACCCAGCCGCGCAGGAACTCGACCTGCGGTTTGTGCCAGCGGAAGTGGACTTCCGCCACGCCACCGGGTGCGAGGATACGGTAGGCGGTGTAGAACACCAGCCAGGCCTGGGC    >  5:26338/1‑147                                                                                                                                                     GACCAGTGCCAGCACCACAGTGCCCAGGCGGCGAACCCAGCCGCGCAGGAACTCGACCTGCGGTTTGTGCCAGCGGAAGTGGACTTCCGCCACGCCACCGGGGGCGAGGATACGGTAGGCGGTGTAGAACACCAGCCAGGCCTGGGCCA  <  3:251306/149‑1                                                                                                                                                                                                                                                                                                           GCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5783224‑5783372 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgACCAGTGCCAGCACCACAGTGCCCAGGCGGCGAACCCAGCCGCGCAGGAACTCGACCTGCGGTTTGTGCCAGCGGAAGTGGACTTCCGCCACGCCACCGGGTGCGAGGATACGGTAGGCGGTGTAGAACACCAGCCAGGCCTGGGCCA  <  NC_002947/5783399‑5783252

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.