New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 578337270 (1.180)4 (0.070) 4/246 NT 5.9% coding (1847/3309 nt) kefA intermediate mechanosensitive channel protein
?NC_002947 = 5783399 61 (1.070)coding (1874/3309 nt) kefA intermediate mechanosensitive channel protein

GCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGACCTGCTATGCGCTAATGGCCTGGCTGCTCAGCCGTCTGCTGCTCAGC  >  NC_002947/5783224‑5783520
                                                                                                                                                     |                                                                                                                                                    
gCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCG                                                                                                                                                      >  6:53579‑M1/1‑149 (MQ=255)
    aCCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTg                                                                                                                                                  <  2:342195/149‑1 (MQ=255)
          gcgcCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACt                                                                                                                                            <  2:360447/149‑1 (MQ=255)
             ccgcACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCTCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCTTCTGGGTTCGCCGCCTGGGCACtttg                                                                                                                                         <  3:54430/149‑1 (MQ=255)
             ccgcACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCTGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACtgtg                                                                                                                                         <  8:49435/149‑1 (MQ=255)
             ccgcACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACtgtg                                                                                                                                         <  5:159373/149‑1 (MQ=255)
             ccgcACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACtgtg                                                                                                                                         >  6:26338/1‑149 (MQ=255)
                 aCTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGc                                                                                                                                     >  7:197972/1‑149 (MQ=255)
                  ctctGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCt                                                                                                                                    >  4:300606/1‑149 (MQ=255)
                  ctctGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCt                                                                                                                                    >  1:145998/1‑149 (MQ=255)
                    ctGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTgg                                                                                                                                  >  6:359880/1‑149 (MQ=255)
                          gCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTgg                                                                                                                            <  4:24098/149‑1 (MQ=255)
                            tGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCCCCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTc                                                                                                                          <  3:251306‑M2/149‑2 (MQ=255)
                              gCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTc                                                                                                                          >  5:26338‑M2/1‑146 (MQ=255)
                              gCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCACCTGGGCACTGTGGTGCTGGCACTGGTcg                                                                                                                         >  1:24088‑M2/1‑146 (MQ=255)
                                ccAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTgtggt                                                                                                                                       >  6:343240/1‑132 (MQ=255)
                                ccAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTgtggt                                                                                                                                       <  5:343240/132‑1 (MQ=255)
                                ccAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCAc                                                                                                                               >  1:217270/1‑140 (MQ=255)
                                ccAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCAc                                                                                                                               <  2:217270/140‑1 (MQ=255)
                                ccAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTcggcg                                                                                                                      <  4:193746‑M2/149‑6 (MQ=255)
                                  aGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCgtg                                                                                                                    <  8:356750/149‑1 (MQ=255)
                                    gCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGaccagtgccagcaccacagtgcccaggcggcgaacc                                                                                                                  >  4:124235‑M1/1‑113 (MQ=255)
                                    gCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCgtggt                                                                                                                  <  3:300606/149‑1 (MQ=255)
                                      ctggctggTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGaccagtgccagcaccacagtgcccaggcggcgaaccca                                                                                                                <  3:364955‑M1/149‑39 (MQ=255)
                                              tgtTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGcc                                                                                                        >  7:198000/1‑149 (MQ=255)
                                                ttCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGa                                                                                                      <  7:27326/149‑1 (MQ=255)
                                                ttCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGa                                                                                                      <  8:197972/149‑1 (MQ=255)
                                                 tCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAg                                                                                                     >  5:181207/1‑149 (MQ=255)
                                                 tCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAg                                                                                                     >  1:253693/1‑149 (MQ=255)
                                                  cTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAg                                                                                                     <  2:145998/148‑1 (MQ=255)
                                                   tACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGaccagtgccagcaccacagtgcccaggcggc                                                                                                                       <  7:93769‑M1/129‑32 (MQ=255)
                                                   tACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGaccagtgccagcaccacagtgcccaggcggc                                                                                                                       >  8:93769‑M1/1‑98 (MQ=255)
                                                    acacCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCAc                                                                                                  >  1:273375/1‑149 (MQ=255)
                                                    acacCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCAc                                                                                                  >  4:105641/1‑149 (MQ=255)
                                                     cacCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCAcc                                                                                                 <  5:359880/149‑1 (MQ=255)
                                                         gCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGcc                                                                                             >  4:99597/1‑149 (MQ=255)
                                                           cTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCtt                                                                                           <  6:181207/149‑1 (MQ=255)
                                                              ccGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCg                                                                                         <  8:219296/148‑1 (MQ=255)
                                                                gTATCCTCGCACCCGGTGGCGTGGCGGGAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCa                                                                                      >  1:96323/1‑149 (MQ=255)
                                                                gTATCCTCGCACCCGGTGGCGTGGCGGGAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCa                                                                                      <  2:96323/149‑1 (MQ=255)
                                                                     cTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTgg                                                                                  <  5:53579/148‑1 (MQ=255)
                                                                      tCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCtt                                                                                           <  4:337090/138‑1 (MQ=255)
                                                                       cGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTgg                                                                                  >  4:68874/1‑146 (MQ=255)
                                                                          aCCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAgac                                                                             >  8:344556/1‑148 (MQ=255)
                                                                          aCCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAgac                                                                             >  1:236631/1‑148 (MQ=255)
                                                                           cccGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAgacga                                                                           <  3:193746/149‑1 (MQ=255)
                                                                               gtggcgtggcGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACgtg                                                                       <  3:99597/149‑1 (MQ=255)
                                                                                tggcgtggcgGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTg                                                                                   >  7:186859/1‑136 (MQ=255)
                                                                                tggcgtggcgGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTg                                                                                   <  8:186859/136‑1 (MQ=255)
                                                                                tggcgtggcgGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACgtgt                                                                      <  2:236631/149‑1 (MQ=255)
                                                                                  gcgtggcgGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGtt                                                                     <  5:79481/148‑1 (MQ=255)
                                                                                  gcgtggcgGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTg                                                                    >  8:142746/1‑149 (MQ=255)
                                                                                   cgtggcgGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTgg                                                                   <  2:253693/149‑1 (MQ=255)
                                                                                    gtggcgGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTggg                                                                  <  2:273375/149‑1 (MQ=255)
                                                                                    gtggcgGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTggg                                                                  <  3:282221/149‑1 (MQ=255)
                                                                                    gtggcgGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTggg                                                                  >  5:78057/1‑149 (MQ=255)
                                                                                     tggcgGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCgtg                                                                                                                    <  4:253091/98‑1 (MQ=255)
                                                                                     tggcgGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCgtg                                                                                                                    >  3:253091/1‑98 (MQ=255)
                                                                                       gcgGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGTCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCa                                                                >  1:284024/1‑149 (MQ=255)
                                                                                        cgGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATc                                                              <  8:198000/149‑1 (MQ=255)
                                                                                           aaGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGc                                                           <  2:5357/149‑1 (MQ=255)
                                                                                            aGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAgacgac                                                                          >  8:339056/1‑133 (MQ=255)
                                                                                            aGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAgacgac                                                                          <  7:339056/133‑1 (MQ=255)
                                                                                             gTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGACTGGGCACTCTGGTGCTGGAACTGGTCGGCGTGGTGGCGGTGGACGAGCACCAGCCTTAGGCACTGGCAGACGACGTGTTGGGCATCGGCgt                                                         >  5:221979/1‑149 (MQ=255)
                                                                                               ccACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCTGCGGGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCgtg                                                        <  7:233040/148‑1 (MQ=255)
                                                                                                 aCTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCgtggtg                                                     >  3:352141/1‑149 (MQ=255)
                                                                                                     ccGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCt                                                   <  7:142746/147‑1 (MQ=255)
                                                                                                     ccGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGa                                                 >  1:252089/1‑149 (MQ=255)
                                                                                                      cGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGa                                                 <  7:273179/148‑1 (MQ=255)
                                                                                                             acaAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGACCTGCTAt                                         <  6:78057/149‑1 (MQ=255)
                                                                                                              caAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGACCTGCTATg                                        >  5:173680/1‑149 (MQ=255)
                                                                                                                     cAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGACCTGCTATGCGCTAAt                                 <  2:284024/149‑1 (MQ=255)
                                                                                                                        gTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGACCTGCTATGCGCTAATGGc                              >  6:231253/1‑149 (MQ=255)
                                                                                                                          cGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGAGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGACCTGCTATGCGCTAATGGCCt                            >  7:203346/1‑149 (MQ=255)
                                                                                                                             gTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGACCTGCTATGCGCTAATGGCCTGgc                         <  3:68874/149‑1 (MQ=255)
                                                                                                                                 cTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGACCTGCTATGCGCTAATGGCCTGgctgc                      <  5:231253/148‑1 (MQ=255)
                                                                                                                                  tGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGACCTGCTATGCGCTAATGGCCTGgctgct                     >  6:215626/1‑148 (MQ=255)
                                                                                                                                           tGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTcggcgaacccagccgcgcaggaactcgacctgcggtttgtgccagcggaagtggacttccgccacgccaccgggtgcgaggatacggtaggcggtgtagaacaccagccag            <  3:364955‑M2/149‑112 (MQ=255)
                                                                                                                                             ggTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTcggcgaacccagccgcgcaggaactcgacctgcggtttgtgccagcggaagtggacttccgccacgccaccgggtgcgaggatacggtaggcggtgtagaacaccagccaggc          >  4:124235‑M2/1‑36 (MQ=255)
                                                                                                                                             ggTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGACCTGCTATGCGCTAATGGCCTGGCTGCTCAGCCGTctg           <  2:145593/148‑1 (MQ=255)
                                                                                                                                               ttCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGACCTGCTATGCGCTAATGGCCTGGCTGCTCAGCCGTctgctg        >  7:161080/1‑149 (MQ=255)
                                                                                                                                               ttCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGACCTGCTATGCGCTAATGGCCTGGCTGCTCAGCCGTctgctg        >  3:94443/1‑149 (MQ=255)
                                                                                                                                                 cGCCGaccagtgccagcaccacagtgcccaggcggcgaacccagccgcgcaggaactcgacctgcggtttgtgccagcggaagtggacttccgccacgccaccgggtgcgaggatacggtaggcggtgtagaacaccagccaggcctgg      <  4:193746‑M1/149‑145 (MQ=255)
                                                                                                                                                  gccgccTGGGCACTGTGGTGCTGGCACTGGTcggcgaacccagccgcgcaggaactcgacctgcggtttgtgccagcggaagtggacttccgccacgccaccgggtgcgaggatacggtaggcggtgta                         <  7:93769‑M2/129‑99 (MQ=255)
                                                                                                                                                  gccgccTGGGCACTGTGGTGCTGGCACTGGTcggcgaacccagccgcgcaggaactcgacctgcggtttgtgccagcggaagtggacttccgccacgccaccgggtgcgaggatacggtaggcggtgta                         >  8:93769‑M2/1‑31 (MQ=255)
                                                                                                                                                    cgccTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGACCTGCTATGCGCTAATGGCCTGGCTGCTCAGCCGTCTGCTGCTcag   <  6:173680/149‑1 (MQ=255)
                                                                                                                                                    cGaccagtgccagcaccacagtgcccaggtggcgaacccagccgcgcaggaactcgacctgcggtttgtgccagcggaagtggacttccgccacgccaccgggtgcgaggatacggtaggcggtgtagaacaccagccaggcctgggc    >  1:24088‑M1/1‑2 (MQ=255)
                                                                                                                                                     gaccagtgccagcaccacagtgcccaggcggcgaacccagccgcgcaggaactcgacctgcggtttgtgccagcggaagtggacttccgccacgccaccgggtgcgaggatacggtaggcggtgtagaacaccagccaggcctgggc    >  5:26338‑M1/1‑1 (MQ=255)
                                                                                                                                                     gaccagtgccagcaccacagtgcccaggcggcgaacccagccgcgcaggaactcgacctgcggtttgtgccagcggaagtggacttccgccacgccaccgggggcgaggatacggtaggcggtgtagaacaccagccaggcctgggcca  <  3:251306‑M1/149‑149 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
GCCAACCTGGGCGCCGCACTCTGGCAGCTGGCCCAGGCCTGGCTGGTGTTCTACACCGCCTACCGTATCCTCGCACCCGGTGGCGTGGCGGAAGTCCACTTCCGCTGGCACAAACCGCAGGTCGAGTTCCTGCGCGGCTGGGTTCGCCGCCTGGGCACTGTGGTGCTGGCACTGGTCGGCGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGACCTGCTATGCGCTAATGGCCTGGCTGCTCAGCCGTCTGCTGCTCAGC  >  NC_002947/5783224‑5783520

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.