New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5936586	59 (1.000)	3 (0.050)	3/246	NT	5.3%	coding (103/960 nt)	yhiI	translation‑like protein
	?	NC_002947	= 5936605	50 (0.880)					coding (122/960 nt)	yhiI	translation‑like protein

CGCCAGGCATGATGTACCGTGCATGACCGCAAGGATGCAGAACGATGAACCGATATGCCCCTAGAATCTTCGCCACTGCACTGATCGCACTGCTCGCTGCAGCCGGCGGGCTGGGGTACTGGAAGTCGCTCCACGACCAGTTGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5936440‑5936586 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgTTGCCCATGCTCAGGCCTTCGGGCAACTGGTCGTGG  <  NC_002947/5936605‑5936570                                                                                                                                                                                         CGCCAGGAATGATGTACCGTGCATGACCGCAAGGATGCAGAACGATGAACCGATATGCCCCTAGAATCTTCGACACTGCACTGATCGCACTGCTCGCTGCAGCCGGCGGGCTGTGGTACTGGAAGTAGCTCCACGACCAGTTCCCCG                                      >  8:345079/1‑147                               AAGGATGCAGAACGATGAACCGATATGCCCCTAGAATCTTCGCCACTGCACTGATCGCACTGCTCGCTGCAGCCGGCGGGCTGGGGTACTGGAAGTCGCTCCACGACCAGTTGCCCGTTGCCCATGCTCAGGCCTTCGGGCAACTGGTC      <  3:63888/149‑1                                                                     TTCGCCACTGCACTGATCGCACTGCTCGCTGCAGCCGGCGGGCTGGGGTACTGGAAGTCGCTCCACGACCAGTTGCCCGTTGCCCATGCTCAGGCCTTCGGGCAACTGGCCGTGG  <  1:353659/115‑1                                                                     TTCGCCACTGCACTGATCGCACTGCTCGCTGCAGCCGGCGGGCTGGGGTACTGGAAGTCGCTCCACGACCAGTTGCCCGTTGCCCATGCTCAGGCCTTCGGGCAACTGGCCGTGG  >  2:353659/1‑115                                                                                              TCGCTGCAGCCGGCGGGCTGGGGTACTGGAAGTCGCTCCACGACCAGTTG                                          >  3:242215/1‑50                                                                                              TCGCTGCAGCCGGCGGGCTGGGGTACTGGAAGTCGCTCCACGACCAGTTG                                          <  4:242215/50‑1                                                                                                                                                                                         CGCCAGGCATGATGTACCGTGCATGACCGCAAGGATGCAGAACGATGAACCGATATGCCCCTAGAATCTTCGCCACTGCACTGATCGCACTGCTCGCTGCAGCCGGCGGGCTGGGGTACTGGAAGTCGCTCCACGACCAGTTGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5936440‑5936586 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgTTGCCCATGCTCAGGCCTTCGGGCAACTGGTCGTGG  <  NC_002947/5936605‑5936570

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.