| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5970657 = | 61 (1.030) | 4 (0.070) | 4/244 | NT | 6.9% | coding (637/2124 nt) | PP_5236 | hypothetical protein |
| ? | NC_002947 | 5970718 = | 50 (0.890) | coding (576/2124 nt) | PP_5236 | hypothetical protein | |||||
CACGCTTCAGGCCCAGTGCCCATGCCGATGTAGAGGTACAGGAAGCTGCAGCGCCGTTGCTGGTGAGGCATGGGCTGTTGCCCTTGGCCGAGCTGCCACAGTCGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5970764‑5970657‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgcAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAACTGCGCACTGATGCGCAGCATGCCAATGGCCGCTGCCACGGGGTGCGCAGAGCGG > NC_002947/5970718‑5970865 CACGCTTCAGGCCCAGTGCCCATGCCGATGTAGAGGTACAGGAAGCTGCAGCGCCGTTGCTGGTGAGGCATGGGCTGTTGCCCTTGGCCGAGCTGCCACAGTC > 7:37949/1‑103CACGCTTCAGGCCCAGTGCCCATGCCGATGTAGAGGTACAGGAAGCTGCAGCGCCGTTGCTGGTGAGGCATGGGCTGTTGCCCTTGGCCGAGCTGCCACAGTC < 8:37949/103‑1 TGCAGCGCCGTTGCTGGTGAGGCATGGTCTGTTGCCCTTGGCCGAGCTGCCACAGTCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCT > 8:107388/1‑148 CGTTGCTGGTGAGGCATGGGCTGTTGCCCTTGGCCGAGCTGCCACAGTCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCAT > 5:152830/1‑143 CGTTGCTGGTGAGGCATGGGCTGTTGCCCTTGGCCGAGCTGCCACAGTCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCAT < 6:152830/143‑1 GTGAGGCATGGGCTGTTGCCCTTGGCCGAGCTGCCACAGTCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAACTGCGCACT < 7:107388/148‑1 CAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAACTGCGCACTGATGCGCAGCATGCCAATGGCCGCTGCCACGGGGTGCGCAGAGCGG > 1:235909/1‑149 CAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAACTGCGCACTGATGCGCAGCATGCCAATGGCCGCTGCCACGGGGTGCGCAGAGCGG > 4:331580/1‑149 CACGCTTCAGGCCCAGTGCCCATGCCGATGTAGAGGTACAGGAAGCTGCAGCGCCGTTGCTGGTGAGGCATGGGCTGTTGCCCTTGGCCGAGCTGCCACAGTCGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5970764‑5970657‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgcAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAACTGCGCACTGATGCGCAGCATGCCAATGGCCGCTGCCACGGGGTGCGCAGAGCGG > NC_002947/5970718‑5970865 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |