New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5970657 = | 61 (1.030) | 4 (0.070) | 4/244 | NT | 6.9% | coding (637/2124 nt) | PP_5236 | hypothetical protein |
? | NC_002947 | 5970718 = | 50 (0.890) | coding (576/2124 nt) | PP_5236 | hypothetical protein |
GCCGGGGCGGGCGATCAGCGCATGGCGCAGCCAGTAATAGCGAGGGTCCTCGTTTTCATGGTCGACCCGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAACTGCGCACTGATGCGCAGCATGCCAATGGCCGCTGCCACGGGGTGCGCAGAGCGGT > NC_002947/5970571‑5970866 | agcctggttggttgctgcaactgtttcagggggagcctgcacgcttcaggcccagtgcccatgccgatgtagaggtacaggaagctGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGACCATGCCTCACCAGCAAC‑GGCGCTGCa > 8:107388‑M1/87‑148 (MQ=255) gggcgggcGATCAGCGCATGGCGCAGCCAGTAATAGCGAGGGTCCTCGTTTTCATGGTCGACCCGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTc < 3:341175/149‑1 (MQ=255) tCAGCGCATGGCGCAGCCAGTAATAGCGAGGGTCCTCGTTTTCATGGTCGACCCGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACctct < 4:158004/149‑1 (MQ=255) cATGGCGCAGCCAGTAATAGCGAGGGTCCTCGTTTTCATGGTCGACCCGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCg < 2:255513/149‑1 (MQ=255) aTGGCGCAGCCAGTAATAGCGAGGGTCCTCGTTTTCATGGTCGACCCGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCgg > 5:120162/1‑149 (MQ=255) gcgcAGCCAGTAATAGCGAGGGTCCTCGTTTTCATGGTCGACCCGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATc > 5:31294/1‑144 (MQ=255) gcgcAGCCAGTAATAGCGAGGGTCCTCGTTTTCATGGTCGACCCGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATc < 6:31294/144‑1 (MQ=255) cgcAGCCAGTAATAGCGAGGGTCCTCGTTTTCATGGTCGACCCGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATg > 4:150099/1‑149 (MQ=255) aTAGCGAGGGTCCTCGTTTTCATGGTCGACCCGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGcc < 6:20165/149‑1 (MQ=255) ggTCCTCGTTTTCATGGTCGACCCGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTc > 8:194104/1‑109 (MQ=255) ggTCCTCGTTTTCATGGTCGACCCGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTc < 7:194104/109‑1 (MQ=255) gTCCTCGTTTTCATGGTCGACCCGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTg > 6:251641/1‑149 (MQ=255) tCCTCGTTTTCATGGTCGACCCGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATgg > 6:213006/1‑129 (MQ=255) tCCTCGTTTTCATGGTCGACCCGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATgg < 5:213006/129‑1 (MQ=255) cTCGTTTTCATGGTCGACCCGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAG‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAg < 1:87896/149‑1 (MQ=255) tCGTTTTCATGGTCGACCCGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGc > 6:100971/1‑146 (MQ=255) tCGTTTTCATGGTCGACCCGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGc < 5:100971/146‑1 (MQ=255) aTGGTCGACCCGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCa < 7:354665/139‑1 (MQ=255) aTGGTCGACCCGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCa > 8:354665/1‑139 (MQ=255) tGGTCGACCCGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCAc > 6:123322/1‑121 (MQ=255) tGGTCGACCCGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCAc < 5:123322/121‑1 (MQ=255) gTCGACCCGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGaa < 3:136821/149‑1 (MQ=255) gTCGACCCGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGa > 5:38957/1‑148 (MQ=255) gTCGACCCGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCACACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATg > 7:247052/1‑114 (MQ=255) gTCGACCCGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCACACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATg < 8:247052/114‑1 (MQ=255) tCGACCCGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGaa > 8:76927/1‑148 (MQ=255) cccGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGt > 7:39986/1‑149 (MQ=255) gCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTgcagc > 2:279564/1‑148 (MQ=255) ccAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCATGCTCCCCCTGAAACAGTTGCAGcaac > 6:172409/1‑149 (MQ=255) tAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCaaccaacc < 2:140894/149‑1 (MQ=255) tgcagcgccgttgctggtgaggcatggtctgttgcccttggccgagctgccacagtcgctgcAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCt > 8:107388‑M2/63‑148 (MQ=255) GACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTg < 8:37949‑M1/103‑1 (MQ=255) GACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTg > 7:37949‑M1/1‑103 (MQ=255) aCTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTgcag < 8:45420/127‑1 (MQ=255) aCTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTgcag > 7:45420/1‑127 (MQ=255) aCTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAAc > 3:218947/1‑149 (MQ=255) cgttgctggtgaggcatgggctgttgcccttggccgagctgccacagtcgctgcAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCAt > 5:152830‑M2/55‑143 (MQ=255) cgttgctggtgaggcatgggctgttgcccttggccgagctgccacagtcgctgcAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCAt < 6:152830‑M2/89‑1 (MQ=255) gCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAACGGGCGCTGCAGCTTCCTGTACCTCTACATCGGCAt > 1:72935/1‑76 (MQ=255) gCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCAt < 2:72935/75‑1 (MQ=255) gCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGtt < 8:66197/117‑1 (MQ=255) gCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGtt > 7:66197/1‑117 (MQ=255) aGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAACTGCGCACt > 6:208478/1‑149 (MQ=255) gtgaggcatgggctgttgcccttggccgagctgccacagtcgctgcAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAACTGCGCACt < 7:107388‑M2/102‑1 (MQ=255) cAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAACTGCGCACTGATGCgca < 8:39986/149‑1 (MQ=255) cAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAACTGCGCACTGATGCgca < 1:279564/149‑1 (MQ=255) gggCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGAACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAACTGCGCACTGATGCgcagca < 3:143684/149‑1 (MQ=255) cAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAACTGCGCACTGATGCGCAGCATGc < 3:150099/149‑1 (MQ=255) aaCAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAACTGCGCACTGATGCGCAGCATGc > 5:325529/1‑148 (MQ=255) gCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAACTgcg > 1:287341/1‑126 (MQ=255) gCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAACTgcg < 2:287341/126‑1 (MQ=255) cccATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAACTGCGCACTGATGCGCAGCATGCCAATgg < 7:76927/149‑1 (MQ=255) cccATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAACTGCGCACTGATGCGCAGCATGCCAATgg > 2:188863/1‑149 (MQ=255) tGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCATGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAACTGCGCACTGATGCGCAGCATGCCAATGGCCGc < 5:172409/149‑1 (MQ=255) ccTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAACTGCGCACTGATGCGCAGCATGCCAATGGCCGCt < 5:251641/148‑1 (MQ=255) aGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAACTGCGCACTGATGCGCAGCATGCCAATGGCCGCTGCCACggg > 1:300348/1‑149 (MQ=255) aGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAACTGCGCACTGATGCGCAGCATGCCAATGGCCGCTGCCACggg < 6:38957/149‑1 (MQ=255) c‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAACTGCGCACTGATGCGCAGCATGCCAATGGCCGCTGCCACGGGGTgcg < 6:120162/149‑1 (MQ=255) gcgcTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAACTGCGCACTGATGCGCAGCATGCCAATGGCCGCTGCCACGGGGTGCGCa < 4:218947/149‑1 (MQ=255) cAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAACTGCGCACTGATGCGCAGCATGCCAATGGCCGCTGCCACGGGGTGCGCAGAGCgg > 4:331580‑M2/2‑149 (MQ=255) cAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAACTGCGCACTGATGCGCAGCATGCCAATGGCCGCTGCCACGGGGTGCGCAGAGCgg > 1:235909‑M2/2‑149 (MQ=255) aGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAACTGCGCACTGATGCGCAGCATGCCAATGGCCGCTGCCACGGGGTGCGCAGAGCGGt > 5:130529/1‑149 (MQ=255) | GCCGGGGCGGGCGATCAGCGCATGGCGCAGCCAGTAATAGCGAGGGTCCTCGTTTTCATGGTCGACCCGCTTGCCCAGATAGCGCGGCAGCGACTGTGGCAGCTCGGCCAAGGGCAACAGCCCATGCCTCACCAGCAAC‑GGCGCTGCAGCTTCCTGTACCTCTACATCGGCATGGGCACTGGGCCTGAAGCGTGCAGGCTCCCCCTGAAACAGTTGCAGCAACCAACCAGGCTCATGGAACTGCGCACTGATGCGCAGCATGCCAATGGCCGCTGCCACGGGGTGCGCAGAGCGGT > NC_002947/5970571‑5970866 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |