| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6090247 | 79 (1.340) | 6 (0.110) | 5/242 | NT | 7.6% | coding (1240/1530 nt) | PP_5342 | GntR family transcriptional regulator |
| ? | NC_002947 | = 6090280 | 72 (1.290) | coding (1207/1530 nt) | PP_5342 | GntR family transcriptional regulator | |||||
GCGTCACTTCCACTTCCACCGCCTCAGCCTTGGCCACCAACTCCTGCTCCCGAGCAAAGTTATCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGGCCTTGAGCACATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6090094‑6090247‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacatcCGCCGTATGCGCAAGGCGGCATTGAAGCGGCGCGATGTGCTCAAGGCCGGTTGGCCTGTGGATATTCCGGGGTTGGGTGCAATGCCGGAAGTGGCGGCTGGGCTGCATGTGAAGGTCAATGTGGATAACTTTGCTCGGGAGCAGGAG < NC_002947/6090280‑6090134 GCGTCACTTCCACTTCCACCGCCTCAGCCTTGGCCACCAACTCCTGCTCCCGAGCAAAGTTATCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGGCCTTGAG < 5:341319/148‑1GCGTCACTTCCACTTCCACCGCCTCAGCCTTGGCCACCAACTCCTGCTCCCGAGCAAAGTTATCCACATTGACCCTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGGCCTTGAG > 6:308696/1‑148 CGTCACTTCCACTTCCACCGCCTCAGCCTTGGCCACCAACTCCTGCTCCCGAGCAAAGTTATCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGGCCTTGAGCA < 6:170461/149‑1 ACTTCCACTTCCACCGCCTCAGCCTTGGCCACCAACTCCTGCTCCCGAGCAAAGTTATCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGGCCTTGAGCACATC > 8:281020/1‑149 CTTCCACCGCCTCAGCCTTGGCCACCAACTCCTGCTCCCGAGCAAAGTTATCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGGCCTTGAGCACATCCGCCGTA > 4:274343/1‑149 CACCAACTCCTGCTCCCGAGCAAAGTTATCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGGCCTTGAGCACATCCGCCGTATGCGCAAGGCGGCATTGAAGCG > 8:277070/1‑149 CTGCTCCCGAGCAAAGTTATCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGGCCTTGAGCACATCCGCCGTATGCGCAAGGCGGCATTGAAGCGGCGCGAT < 3:274343/147‑1 CTGCTCCCGAGCAAAGTTATCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGGCCTTGAGCACATCCGCCGTATGCGCAAGGCGGCATTGAAGCGGCGCGAT < 7:277070/147‑1 CTCCCGAGCAAAGTTATCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGGCCTTGAGCACATCCGCCGTATGCGCAAGGCGGCATTGAAGCGGCGCGATGTG > 5:157073/1‑147 CTCCCGAGCAAAGTTATCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGGCCTTGAGCACATCCGCCGTATGCGCAAGGCGGCATTGAAGCGGCGCGATGTG < 6:157073/147‑1 GCACATCCGCCGTATGCGCAAGGCGGCATTGAAGCGGCGCGATGTGCTCAAGGCCGGTTGGCCTGTGGATATTCCGGGGTTGGGTGCAATGCCGGAAGTGGCGGCTGGGCTGCATGTGAAGGTCAATGTGGATAACTTTGCTC > 3:297987/1‑143 GCACATCCGCCGTATGCGCAAGGCGGCATTGAAGCGGCGCGATGTGCTCAAGGCCGGTTGGCCTGTGGATATTCCGGGGTTGGGTGCAATGCCGGAAGTGGCGGCTGGGCTGCATGTGAAGGTCAATGTGGATAACTTTGCTC < 4:297987/143‑1 CACATCCGCCGTATGCGCAAGGCGGCATTGAAGCGGCGCGATGTGCTCAAGGCCGGTTGGCCTGTGGATATTCCGGGGTTGGGTGCAATGCCGGAAGTGGCGGCTGGGCTGCATGTGA > 5:135133/1‑118 CACATCCGCCGTATGCGCAAGGCGGCATTGAAGCGGCGCGATGTGCTCAAGGCCGGTTGGCCTGTGGATATTCCGGGGTTGGGTGCAATGCCGGAAGTGGCGGCTGGGCTGCATGTGA < 6:135133/118‑1 ACATCCGCCGTATGCGCAAGGCGGCATTGAAGCGGCGCGATGTGCTCAAGGCCGGTTGGCCTGTGGATATTCCGGGGTTGGGTGCAATGCCGGAAGTGGCGGCTGGGCTGCATGTGAAGGTCAATGTGGATAACTTTGCTCGGGAGCAG < 4:171077/149‑1 ATCCGCCGTATGCGCAAGGCGGCATTGAAGCGGCGCGATGTGCTCAAGGCCGGTTGGCCTGTGGATATTCCGGGGTTGGGTGCAATGCCGGAAGTGGCGGCTGGGCTGCATGTGAAGGTCAATGTGGATAACTTTGCTCGGGAGCAGGA < 5:290154/149‑1 ATCCGCCGTATGCGCAAGGCGGCATTGAAGCGGCGCGATGTGCTCAAGGCCGGTTGGCCTGTGGATATTCCGGGGTTGGGTGCAATGCCGGAAGTGGCAGCTGGGCTGCATGTGAAGGT < 1:344597/119‑1 ATCCGCCGTATGCGCAAGGCGGCATTGAAGCGGCGCGATGTGCTCAAGGCCGGTTGGCCTGTGGATATTCCGGGGTTGGGTGCAATGCCGGAAGTGGCAGCTGGGCTGCATGTGAAGGT > 2:344597/1‑119 TCCGCCGTATGCGCAAGGCGGCATTGAAGCGGCGCGATGTGCTCAAGGCCGGTTGGCCTGTGGATATTCCGGGGTTGGGTGCAATGCCGGAAGTGGCGGCTGGGCTGCATGTGAAGGTCAATGTGGATAACTTTGCTCGGGAGCAGGAG > 7:281020/1‑149 TCCGCCGTATGCGCAAGGCGGCATTGAAGCGGCGCGATGTGCTCAAGGCCGGTTGGCCTGTGGATATTCCGGGGTTGGGTGCAATGCCGGAAGTGGCGGCTGGGCTGCATGTGAAGGTCAATGTGGATAACTTTGCTCGGGAGCAGGAG > 3:52026/1‑149 GCGTCACTTCCACTTCCACCGCCTCAGCCTTGGCCACCAACTCCTGCTCCCGAGCAAAGTTATCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGGCCTTGAGCACATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6090094‑6090247‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacatcCGCCGTATGCGCAAGGCGGCATTGAAGCGGCGCGATGTGCTCAAGGCCGGTTGGCCTGTGGATATTCCGGGGTTGGGTGCAATGCCGGAAGTGGCGGCTGGGCTGCATGTGAAGGTCAATGTGGATAACTTTGCTCGGGAGCAGGAG < NC_002947/6090280‑6090134 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |