New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6090247	79 (1.340)	6 (0.110)	5/242	NT	7.6%	coding (1240/1530 nt)	PP_5342	GntR family transcriptional regulator
	?	NC_002947	= 6090280	72 (1.290)					coding (1207/1530 nt)	PP_5342	GntR family transcriptional regulator

CTCCTGCTCCCGAGCAAAGTTATCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGCCCTGGCTGAAGGCCTGCACCAGTTTCGACGGAAGCACCAGGTAGCCTAGACGC  >  NC_002947/6090134‑6090422                                                                                                                                                    |                                                                                                                                               cTCCTGCTCCCGAGCAAAGTTATCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGga                                                                                                                                              >  3:52026‑M2/1‑147 (MQ=255) cTCCTGCTCCCGAGCAAAGTTATCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGga                                                                                                                                              >  7:281020‑M2/1‑147 (MQ=255)  tCCTGCTCCCGAGCAAAGTTATCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGgat                                                                                                                                             <  5:290154‑M2/149‑4 (MQ=255)    cTGCTCCCGAGCAAAGTTATCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGgatgt                                                                                                                                           <  4:171077‑M2/149‑6 (MQ=255)        tCCCGAGCAAAGTTATCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCg                                                                                                                                       >  5:222003/1‑149 (MQ=255)        tCCCGAGCAAAGTTATCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCg                                                                                                                                       >  1:184965/1‑149 (MQ=255)          ccGAGCAAAGTTATCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCt                                                                                                                                     >  8:284586/1‑149 (MQ=255)          ccGAGCAAAGTTATCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCt                                                                                                                                     >  8:131371/1‑149 (MQ=255)           cGAGCAAAGTTATCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCt                                                                                                                                     >  1:52314/1‑148 (MQ=255)            gAGCAAAGTTATCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGgatgtgc                                                                                                                                         >  3:297987‑M2/1‑136 (MQ=255)            gAGCAAAGTTATCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGgatgtgc                                                                                                                                         <  4:297987‑M2/143‑8 (MQ=255)                 aaGTTATCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATg                                                                                                                              <  7:131371/149‑1 (MQ=255)                  aGTTATCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATgg                                                                                                                             >  3:83737/1‑149 (MQ=255)                       tCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACg                                                                                                                        >  6:260635/1‑149 (MQ=255)                       tCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACg                                                                                                                        <  4:83737/149‑1 (MQ=255)                        ccACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACgg                                                                                                                       >  4:300623/1‑149 (MQ=255)                         cacaTTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACggg                                                                                                                      <  2:52314/149‑1 (MQ=255)                         cacaTTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACggg                                                                                                                      >  8:271922/1‑149 (MQ=255)                          acaTTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGc                                                                                                                     >  8:266783/1‑149 (MQ=255)                           caTTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGcc                                                                                                                    <  7:284586/149‑1 (MQ=255)                           caTTGACCTTCACATGCAGCCCAGCAGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGc                                                                                                                     >  3:210122/1‑148 (MQ=255)                             ttGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCAt                                                                                                                  >  8:186344/1‑149 (MQ=255)                              tGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGTGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCAt                                                                                                                  >  5:127510/1‑148 (MQ=255)                                aCCTTCACATGCAGCCCAGCTGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGgat                                                                                                                                             >  2:344597‑M2/1‑116 (MQ=255)                                aCCTTCACATGCAGCCCAGCTGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGgat                                                                                                                                             <  1:344597‑M2/119‑4 (MQ=255)                                 ccTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAAc                                                                                                              >  7:234155/1‑149 (MQ=255)                                  cTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACt                                                                                                             >  5:185907/1‑149 (MQ=255)                                    tCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGgatgtg                                                                                                                                          >  5:135133‑M2/1‑112 (MQ=255)                                    tCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGgatgtg                                                                                                                                          <  6:135133‑M2/118‑7 (MQ=255)                                        aTGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCa                                                                                                       >  5:113777/1‑149 (MQ=255)                                         tGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCAt                                                                                                      >  3:92341/1‑149 (MQ=255)                                           cagcccagccGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCa                                                                                                    <  6:185907/149‑1 (MQ=255)                                            agcccagccGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCAc                                                                                                   <  6:290154/149‑1 (MQ=255)                                            agcccagccGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCAc                                                                                                   <  3:171077/149‑1 (MQ=255)                                            agcccagccGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCAc                                                                                                   >  4:197479/1‑149 (MQ=255)                                             gcccagccGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGGTACTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCAc                                                                                                   >  1:103418/1‑149 (MQ=255)                                                      ccACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGgctg                                                                                         <  6:113777/149‑1 (MQ=255)                                                            ccGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGAc                                                                                    <  4:92341/148‑1 (MQ=255)                                                             cGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATc                                                                                                     >  5:35715/1‑130 (MQ=255)                                                             cGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATc                                                                                                     <  6:35715/130‑1 (MQ=255)                                                               gCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTcc                                                                                <  7:318767/149‑1 (MQ=255)                                                                  ttGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGaa                                                                             <  2:184965/149‑1 (MQ=255)                                                                  ttGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCATCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCCGCCATCACGCACTGGCTGATGACCTCAGa                                                                              >  4:156169/1‑148 (MQ=255)                                                                     cACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGc                                                                          <  7:266783/149‑1 (MQ=255)                                                                     cACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGc                                                                          <  3:111909/149‑1 (MQ=255)                                                                       cccAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCg                                                                        <  3:197479/149‑1 (MQ=255)                                                                       cccAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACACACTGGCTGCTGACCTCCGAATGCCg                                                                        <  7:186344/149‑1 (MQ=255)                                                                          aaCCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCAc                                                                     >  6:381642/1‑149 (MQ=255)                                                                             cccGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGc                                                                  <  3:156169/149‑1 (MQ=255)                                                                               cGGAATATCCACAGGCCTACCGG‑CCTTGAGCAGATCGCGCCGCGTCAATGCCGCCTTGAGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTgg                                                                                            <  7:172625/121‑1 (MQ=255)                                                                               cGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCta                                                                >  4:107751/1‑149 (MQ=255)                                                                                 gAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCta                                                                >  2:323839/1‑147 (MQ=255)                                                                                       ccACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTg                                                        >  2:128445/1‑149 (MQ=255)                                                                                        cacaGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTc                                                                                                            <  5:108968/96‑1 (MQ=255)                                                                                        cacaGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGc                                                       >  3:162893/1‑149 (MQ=255)                                                                                        cacaGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGCCCACGGGCCATGAACTc                                                                                                            >  6:108968/1‑96 (MQ=255)                                                                                         acaGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGcc                                                      >  3:265803/1‑149 (MQ=255)                                                                                         acaGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGcc                                                      >  5:119611/1‑149 (MQ=255)                                                                                          caGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGccc                                                     <  6:222003/149‑1 (MQ=255)                                                                                             gCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGCCCTgg                                                  <  3:371611/149‑1 (MQ=255)                                                                                              ccAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGCCCTGGc                                                 <  8:357840/149‑1 (MQ=255)                                                                                                aaCCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGgctg                                                                                         >  6:122795/1‑107 (MQ=255)                                                                                                aaCCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGgctg                                                                                         <  5:122795/107‑1 (MQ=255)                                                                                                  ccGG‑GCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGGCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGc                                                       <  4:276921/139‑1 (MQ=255)                                                                                                  ccGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCTTCACGCACTgg                                                                                            >  3:51774/1‑102 (MQ=255)                                                                                                  ccGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCTTCACGCACTgg                                                                                            <  4:51774/102‑1 (MQ=255)                                                                                                  ccGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGc                                                       >  3:276921/1‑139 (MQ=255)                                                                                                  ccGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGCCCTGGCTg                                               >  5:55047/1‑147 (MQ=255)                                                                                                   cGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGCCCTGGCTGAAg                                            <  4:210122/149‑1 (MQ=255)                                                                                                       ccTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGCCCTGGCTGAAGGcc                                         >  2:196008/1‑149 (MQ=255)                                                                                                       ccTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGCCCTGGCTGAAGGcc                                         >  2:47259/1‑149 (MQ=255)                                                                                                           gAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGCCCTGGCTGAAGGCCTg                                       <  6:355936/147‑1 (MQ=255)                                                                                                            aGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGCCCTGGCTGAAGGCCTGCa                                     <  4:162893/148‑1 (MQ=255)                                                                                                            aGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGCCCTGGCTGAAGGCCTGCAc                                    <  4:265803/149‑1 (MQ=255)                                                                                                            aGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGCCCTGGCTGAAGGCCTGCAc                                    >  2:124127/1‑149 (MQ=255)                                                                                                              cacaTCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGgatgtgctcaaggccggttggcctgtggatattccggggttgggtgcaatgccggaagtggcggctgggctgcatgtgaaggtcaatgtggataactttgctcgggag                                    >  5:157073‑M2/1‑39 (MQ=255)                                                                                                              cacaTCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGgatgtgctcaaggccggttggcctgtggatattccggggttgggtgcaatgccggaagtggcggctgggctgcatgtgaaggtcaatgtggataactttgctcgggag                                    <  6:157073‑M2/147‑109 (MQ=255)                                                                                                              cacaTCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGCCCTGGCTGAAGGCCTGCACCa                                  <  6:127510/149‑1 (MQ=255)                                                                                                                 aTCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGgatgtgctcaaggccggttggcctgtggatattccggggttgggtgcaatgccggaagtggcggctgggctgcatgtgaaggtcaatgtggataactttgctcgggagcag                                 <  7:277070‑M2/147‑112 (MQ=255)                                                                                                                 aTCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGgatgtgctcaaggccggttggcctgtggatattccggggttgggtgcaatgccggaagtggcggctgggctgcatgtgaaggtcaatgtggataactttgctcgggagcag                                 <  3:274343‑M2/147‑112 (MQ=255)                                                                                                                  tCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGCCCTGGCTGAAGGCCTGCACCAGttt                              <  1:128445/149‑1 (MQ=255)                                                                                                                        cgcTTCAATGCCGCCTTGCGCATACGGCGgatgtgctcaaggccggttggcctgtggatattccggggttgggtgcaatgccggaagtggcggctgggctgcatgtgaaggtcaatgtggataactttgctcgggagcaggagttggtg                        >  8:277070‑M2/1‑29 (MQ=255)                                                                                                                           ttCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGCCCTGGCTGAAGGCCTGCACCAGTTTCGACGGAAg                     >  7:124750/1‑149 (MQ=255)                                                                                                                             cAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGCCCTGGCTGAAGGCCTGCACCAGTTTCGACGGAAGCa                   >  6:354764/1‑149 (MQ=255)                                                                                                                             cAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCAATGAACTCGGCCATAACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGCCCTGGCTGAAGGCCTGCACCAGTTTCGACGGAAGCa                   >  7:361388/1‑149 (MQ=255)                                                                                                                              aaTGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGCCCTGGCTGAAGGCCTGCACCAGTTTCGACGGAAGCAc                  <  1:47259/149‑1 (MQ=255)                                                                                                                               aTGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGCCCTGGCTGAAGGCCTGCACCAGTTTCGACGGAAGCAcc                 <  5:260635/149‑1 (MQ=255)                                                                                                                               aTGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGCCCTGGCTGAAGGCCTGCACCAGTTTCGACGGAAGCAcc                 <  6:119611/149‑1 (MQ=255)                                                                                                                                 gccgccTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCCCTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGCCCTGGCTGACGGCCTGCCCCAGTTTCGACGGAAGCACCAg               >  5:278232/1‑149 (MQ=255)                                                                                                                                      cTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGCCCTGGCTGAAGGCCTGCACCAGTTTCGACGGAAGCACCAGGTAGc          <  8:234155/149‑1 (MQ=255)                                                                                                                                        tGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGCCCTGGCTGAAGGCCTGCACCAGTTTCGACGGAAGCACCAg               <  3:318953/142‑1 (MQ=255)                                                                                                                                        tGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGCCCTGGCTGAAGGCCTGCACCAGTTTCGACGGAAGCACCAg               >  4:318953/1‑142 (MQ=255)                                                                                                                                              tACGGCGgatgtgctcaaggccggttggcctgtggatattccggggttgggtgcaatgccggaagtggcggctgggctgcatgtgaaggtcaatgtggataactttgctcgggagcaggagttggtggccaaggctgaggcggtggaag  >  4:274343‑M2/1‑7 (MQ=255)                                                                                                                                                    |                                                                                                                                               CTCCTGCTCCCGAGCAAAGTTATCCACATTGACCTTCACATGCAGCCCAGCCGCCACTTCCGGCATTGCACCCAACCCCGGAATATCCACAGGCCAACCGG‑CCTTGAGCACATCGCGCCGCTTCAATGCCGCCTTGCGCATACGGCGGATGTGCCGCTGAAAATGGCCACGGGCCATGAACTCGGCCATCACGCACTGGCTGCTGACCTCCGAATGCCGCACCGCTATAGCTCTGCCCTGGCTGAAGGCCTGCACCAGTTTCGACGGAAGCACCAGGTAGCCTAGACGC  >  NC_002947/6090134‑6090422

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.