New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 36354346 (0.780)7 (0.140) 7/222 NT 11.8% intergenic (‑61/+106) lcdH/PP_0303 L‑carnitine dehydrogenase/dehydrocarnitine cleavage enzyme
?NC_002947 = 363602 65 (1.270)intergenic (‑120/+47) lcdH/PP_0303 L‑carnitine dehydrogenase/dehydrocarnitine cleavage enzyme

GGCCAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGG  >  NC_002947/363399‑363690
                                                                                                                                                |                                                                                                                                                   
ggCCAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGc                                                                                                                                                 >  5:390732/1‑149 (MQ=255)
   cAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCcg                                                                                                                                              >  6:286227/1‑149 (MQ=255)
     gggCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCcgcg                                                                                                                                            <  5:176894/149‑1 (MQ=255)
     gggCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCcgcg                                                                                                                                            <  6:390732/149‑1 (MQ=255)
           gggCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACAcc                                                                                                                                      <  5:171897/149‑1 (MQ=255)
                  ccAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACgg                                                                                                                               >  6:81341/1‑149 (MQ=255)
                    aGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGcc                                                                                                                             >  5:263762/1‑149 (MQ=255)
                     gCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTTAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCg                                                                                                                            <  1:79421/149‑1 (MQ=255)
                          tGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGc                                                                                                                        >  2:305187/1‑148 (MQ=255)
                            ccGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCCGTGCCGGTgttc                                                                                                                      <  5:242661/148‑4 (MQ=255)
                            ccGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGccat                                                                                                                     <  1:305187/149‑1 (MQ=255)
                                tCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGccatccat                                                                                                                 <  4:291409/149‑1 (MQ=255)
                                  aCGCCGCTACCCAGGGCGGGGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATcg                                                                                                               >  4:263205/1‑149 (MQ=255)
                                   cgccgcTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATcg                                                                                                               >  1:134083/1‑148 (MQ=255)
                                    gccgcTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGcca                                                                                                                      <  7:162851/140‑1 (MQ=255)
                                    gccgcTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGcca                                                                                                                      >  8:162851/1‑140 (MQ=255)
                                    gccgcTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATcgcg                                                                                                             >  5:213062/1‑149 (MQ=255)
                                     ccgcTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGt                                                                                                            <  3:301677/149‑1 (MQ=255)
                                      cgcTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAaca                                                                                                                                        >  7:133550/1‑120 (MQ=255)
                                      cgcTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAaca                                                                                                                                        <  8:133550/120‑1 (MQ=255)
                                      cgcTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGtt                                                                                                           >  4:170466/1‑149 (MQ=255)
                                      cgcTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGtt                                                                                                           >  4:174729/1‑149 (MQ=255)
                                       gcTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCgtgcccgtgaagcaggcaacgcgatggatggcaccggccgtgc                                                                                                          >  5:236711‑M1/1‑106 (MQ=255)
                                           cccAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGcc                                                                                                        <  3:263205/147‑1 (MQ=255)
                                            ccAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGc                                                                                                     <  6:263762/149‑1 (MQ=255)
                                                  cggcgAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACg                                                                                               <  3:107619/149‑1 (MQ=255)
                                                    gcgAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCgtgcccgtgaagcaggcaacgcgatggatggcaccggccgtgccggtgttcgcggg                                                                                             <  5:338684‑M1/149‑57 (MQ=255)
                                                      gAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCa                                                                                           >  8:87345/1‑149 (MQ=255)
                                                         ggTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACgc                                                                                        >  7:78558‑M2/1‑147 (MQ=255)
                                                              tGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCgtgcccgtgaagcaggcaacgcgatggatggcaccggccgtgccggtgttcgcgggcatgcccgc                                                                                    <  6:236711‑M1/148‑66 (MQ=255)
                                                                 tttCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACgcccgctcc                                                                                 >  5:81341‑M2/1‑139 (MQ=255)
                                                                  ttCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACgcccgctccca                                                                               <  4:132473‑M2/149‑12 (MQ=255)
                                                                         aTAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCgtgcccgtgaagcaggcaacgcgatggatggcaccggccgtgccggtgttcgcgggcatgcccgctcccacagggtt                                                                        >  6:322629‑M1/1‑72 (MQ=255)
                                                                           aaaGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCgtgcccgtgaagcaggcaacgcgatggatggcaccggccgtgccggtgttcgcgggcatgcccgctcccacagggttag                                                                      <  5:322629‑M1/149‑80 (MQ=255)
                                                                           aaaGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCAAGGTCCCGCCCGCTCCCACAGGGTCtt                                                                      >  4:292081/1‑149 (MQ=255)
                                                                              gggCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCgg                                                                   >  8:228455/1‑149 (MQ=255)
                                                                                 cATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCCCAGGGTCTTCGgcg                                                                 >  4:356329/1‑148 (MQ=255)
                                                                                      cTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTg                                                           <  2:134083/149‑1 (MQ=255)
                                                                                        ggTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCg                                                         <  3:170466/149‑1 (MQ=255)
                                                                                          tCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGAt                                                       >  4:326782/1‑149 (MQ=255)
                                                                                            cTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTAGCGATCg                                                     >  3:275588/1‑149 (MQ=255)
                                                                                             tCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGt                                                    >  5:385168/1‑149 (MQ=255)
                                                                                                gggTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTg                                                  >  5:271062/1‑148 (MQ=255)
                                                                                                  gTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGa                                                 >  2:31284/1‑147 (MQ=255)
                                                                                                           aGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAgcg                                      <  5:286227/149‑1 (MQ=255)
                                                                                                           aGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAgcg                                      >  2:305438/1‑149 (MQ=255)
                                                                                                             tAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCgtgcccgtgaagcaggcaacgcgatggatggcaccggccgtgccggtgttcgcgggcatgcccgctccc                                                                                <  3:209201‑M1/105‑70 (MQ=255)
                                                                                                             tAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCgtgcccgtgaagcaggcaacgcgatggatggcaccggccgtgccggtgttcgcgggcatgcccgctccc                                                                                >  4:209201‑M1/1‑36 (MQ=255)
                                                                                                               aTCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGgcgc                                  <  6:243130/149‑1 (MQ=255)
                                                                                                               aTCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGgcgc                                  <  3:132473/149‑1 (MQ=255)
                                                                                                                   gggTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTAGCGATCGTTGAAAGGATCAGCGGCGCtt                                >  1:287772/1‑147 (MQ=255)
                                                                                                                    ggTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAg                             <  7:281419/149‑1 (MQ=255)
                                                                                                                    ggTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAg                             <  1:40721/149‑1 (MQ=255)
                                                                                                                           ggCTAACCCTGTGGGAGTGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCAtt                      >  8:1572/1‑149 (MQ=255)
                                                                                                                             cTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACgcccgctcccacagggttagccatgaaccctgattactgtgttttaccctgaggaccagctatgcccttt                    <  5:322629‑M2/149‑71 (MQ=255)
                                                                                                                               aaCCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACgcccgctcccacagggttagccatgaaccctgattactgtgttttaccctgaggaccagctatgccctttat                  >  6:322629‑M2/1‑77 (MQ=255)
                                                                                                                                 cccTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTcc                >  7:55391/1‑149 (MQ=255)
                                                                                                                                   cTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCCCAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCg              <  3:356329/149‑1 (MQ=255)
                                                                                                                                      tgGGAGCGGGCgtgcccgtgaagcaggcaacgcgatggatggcaccggccgtgccggtgttcgcgggcatgcccgctcccacagggttagccatgaaccctgattactgtgttttaccctgaggaccagctatgccctttatcactgaa           <  4:132473‑M1/149‑139 (MQ=255)
                                                                                                                                       gggAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACgcccgctcccacagggttagccatgaaccctgatta                                                      >  4:209201‑M2/1‑69 (MQ=255)
                                                                                                                                       gggAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACgcccgctcccacagggttagccatgaaccctgatta                                                      <  3:209201‑M2/105‑37 (MQ=255)
                                                                                                                                        ttcgCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCt          >  8:37932/4‑148 (MQ=255)
                                                                                                                                        ggAGCGGGCgtgcccgtgaagcaggcaacgcgatggatggcaccggccgtgccggtgttcgcgggcatgcccgctcccacagggttagccatgaaccctgattactgtgttttaccctgaggaccagctatgccctttatcactgaaa          >  5:81341‑M1/1‑9 (MQ=255)
                                                                                                                                           gCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACgcccgctcccacagggttagccatgaaccctgattactgtgttttaccctgaggaccagctatgccctttatcactgaaatca       <  6:236711‑M2/148‑84 (MQ=255)
                                                                                                                                            cGGGCATGCACGCGAACAGCGGCACGGCCTGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGAGATCTTTGAAAGGATCAGCGGCGCTTGAGTTTCATTTTTTCCCGGCCTTCTGc     <  4:275588/149‑1 (MQ=38)
                                                                                                                                             gggCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTc                 >  2:176683/1‑136 (MQ=255)
                                                                                                                                             gggCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTc                 <  1:176683/136‑1 (MQ=255)
                                                                                                                                               gCgtgcccgtgaagcaggcaacgcgatggatggcaccggccgtgccggtgttcgcgggcatgcccgctcccacagggttagccatgaaccctgattactgtgttttaccctgaggaccagctatgccctttatcactgaaatcaaaacc  >  7:78558‑M1/1‑2 (MQ=255)
                                                                                                                                               gCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCgg  >  8:178169/1‑149 (MQ=255)
                                                                                                                                                |                                                                                                                                                   
GGCCAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGG  >  NC_002947/363399‑363690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.