New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1799841	72 (1.220)	5 (0.090)	5/242	NT	7.5%	intergenic (+11/‑176)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
	?	NC_002947	= 1799947	55 (0.980)					intergenic (+117/‑70)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha

GCACAAGGGCTACCCGACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCT  >  NC_002947/1799695‑1799987                                                                                                                                                    |                                                                                                                                                   gCACAAGGGCTACCCGACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCg                                                                                                                                                  >  6:146337/1‑149 (MQ=255)  cacaAGGGCTACCCGACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCtgc                                                                                                                                                 >  6:300461‑M1/1‑146 (MQ=255)   acaAGGGCTACCCGACCCCGGTGCATCTCTAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCt                                                                                                                                                >  1:28081/1‑149 (MQ=255)          cTACCCGACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGc                                                                                                                                         >  4:54766/1‑149 (MQ=255)                gACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTcg                                                                                                                                   >  3:177754/1‑149 (MQ=255)                  ccccGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTcgcg                                                                                                                                 <  7:279259/149‑1 (MQ=255)                   cccGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCgg                                                                                                                                >  7:66666/1‑149 (MQ=255)                     cGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCggg                                                                                                                               >  6:253879/1‑148 (MQ=255)                     cGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGc                                                                                                                              <  3:355120/149‑1 (MQ=255)                     cGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGc                                                                                                                              <  5:270875/149‑1 (MQ=255)                        tGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACg                                                                                                                           <  8:66666/149‑1 (MQ=255)                            tctcGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCg                                                                                                                       >  4:40683/1‑149 (MQ=255)                                gAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGctct                                                                                                                   >  5:202864/1‑149 (MQ=255)                                gAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGct                                                                                                                     <  3:40683/147‑1 (MQ=255)                                 aGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCtctc                                                                                                                  <  4:177754/149‑1 (MQ=255)                                          cACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGAtt                                                                                                          >  6:253354/1‑148 (MQ=255)                                             gTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATc                                                                                                      >  3:21583/1‑149 (MQ=255)                                              tCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCg                                                                                                     <  8:13865/149‑1 (MQ=255)                                                  gggCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCTGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTc                                                                                                  >  1:298999/1‑149 (MQ=255)                                                  gggCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCt                                                                                                 >  1:229542/1‑149 (MQ=255)                                                   ggCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCTGCTTGGGACGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCTCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCt                                                                                                 <  5:387331/148‑1 (MQ=255)                                                    gCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCt                                                                                                 >  2:288593/1‑147 (MQ=255)                                                     ccTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCg                                                                                                     <  2:8198/142‑1 (MQ=255)                                                     ccTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCg                                                                                                     >  1:8198/1‑142 (MQ=255)                                                      cTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCcgcttcgcggcccttcgcgggcacgcccgctcccacaggtacggccccgccgct                                                                                              >  2:159545‑M1/1‑94 (MQ=255)                                                            ccATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTcgcg                                                                                                                                           <  2:65889/97‑1 (MQ=255)                                                            ccATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTcgcg                                                                                                                                           >  1:65889/1‑97 (MQ=255)                                                            ccATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCggg                                                                                       >  1:195116/1‑149 (MQ=255)                                                             cATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCgggg                                                                                      <  4:164762/149‑1 (MQ=255)                                                               ttCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGcc                                                                                    <  4:21583/149‑1 (MQ=255)                                                               ttCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑CCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGcc                                                                                    >  1:79683/1‑149 (MQ=255)                                                                  aTCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCGCTCACAGGATTGATCGGTCTGAGCGGCGGGGCCGt                                                                                  >  8:339951/1‑148 (MQ=255)                                                                   tCGGCGTTCCTTCGCCCCGGTGGGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTGTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTAc                                                                                >  7:56175/1‑149 (MQ=255)                                                                   tCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCg                                                                                                     <  5:206040/128‑1 (MQ=255)                                                                   tCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCg                                                                                                     >  6:206040/1‑128 (MQ=255)                                                                   tCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTAc                                                                                <  1:288593/149‑1 (MQ=255)                                                                     ggCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCt                                                                              <  5:253879/149‑1 (MQ=255)                                                                       cGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCAt                                                                                                       >  8:160425/1‑122 (MQ=255)                                                                       cGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCAt                                                                                                       <  7:160425/122‑1 (MQ=255)                                                                       cGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCg                                                                                                     >  3:168297/1‑124 (MQ=255)                                                                       cGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCg                                                                                                     <  4:168297/124‑1 (MQ=255)                                                                             ttCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGc                                                                      >  3:269179/1‑149 (MQ=255)                                                                             ttCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGc                                                                      >  8:20375/1‑149 (MQ=255)                                                                             ttCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGc                                                                      >  3:264175/1‑149 (MQ=255)                                                                             ttCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTATCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGc                                                                      >  4:362267/1‑149 (MQ=255)                                                                                gCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCtgctttgcagcccttcgcgggcacgcccgctcccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcggg                                                                   >  3:66022‑M1/1‑68 (MQ=255)                                                                                gCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCcgcttcgcggcccttcgcgggcacgcccgctcccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcgg                                                                    <  1:159545‑M1/148‑81 (MQ=255)                                                                                 ccccGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCTCAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGc                                                                  <  6:279321/149‑1 (MQ=255)                                                                                 ccccGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGc                                                                  <  5:146337/149‑1 (MQ=255)                                                                                 ccccGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGc                                                                  <  6:202864/149‑1 (MQ=255)                                                                                 ccccGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGc                                                                  <  4:264175/149‑1 (MQ=255)                                                                                 ccccGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGc                                                                  <  4:269179/149‑1 (MQ=255)                                                                                  cccGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAgcgg                                                                                           <  5:201727/123‑1 (MQ=255)                                                                                  cccGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAgcgg                                                                                           >  6:201727/1‑123 (MQ=255)                                                                                   ccGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGt                                                                <  5:253354/149‑1 (MQ=255)                                                                                     ggTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGc                                                              <  2:229542/149‑1 (MQ=255)                                                                                          gggcggCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGcggcgg                                                                                        >  8:140036/1‑118 (MQ=255)                                                                                          gggcggCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGcggcgg                                                                                        <  7:140036/118‑1 (MQ=255)                                                                                          gggcggCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCcgc                                                          >  5:186058/1‑148 (MQ=255)                                                                                               gcTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTTTTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTGTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAggg                                                    <  2:28081/149‑1 (MQ=255)                                                                                                cTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGAACGCACGATCTCACAGGATTCATCGGTCTGCGCGGAGGGGCCGTACGGGTGGGAGCGGGCGTGCCCGCGAAGGGc                                                   >  8:175369/1‑149 (MQ=255)                                                                                                 ttGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCt                                                  >  5:193978/1‑149 (MQ=255)                                                                                                    ggAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCtgtg                                                                           >  8:297976/1‑121 (MQ=255)                                                                                                    ggAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCtgtg                                                                           <  7:297976/121‑1 (MQ=255)                                                                                                         cgc‑gcgAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCGCACAGGATTCATCGGTCTGAGCGGCGGGCCCGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAagca                                          >  7:284313/1‑149 (MQ=255)                                                                                                             gcgAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCtgctttgcagcccttcgcgggcacgcccgctcccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcgggcgtgcccgcgaagggccgcgaagcggcc                                       <  4:66022‑M1/149‑110 (MQ=255)                                                                                                              cgAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCtgctttgcagcccttcgcgggcacgcccgctcccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcgggcgtgcccgcgaagggccgcgaagcggccc                                      <  5:300461‑M1/149‑111 (MQ=255)                                                                                                                aaGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAgcccca                                    >  6:186058‑M2/1‑143 (MQ=255)                                                                                                                  ggCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTgg                                                                          <  2:95137/109‑1 (MQ=255)                                                                                                                  ggCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCACGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTgg                                                                          >  1:95137/1‑109 (MQ=255)                                                                                                                        aCCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGCCACGCCCGCTCTCACAGGATTCATCGGGCTGAGCGGCGGGGCCGTACCTGGGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGc                            <  3:54766/149‑1 (MQ=255)                                                                                                                         ccGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGcc                           >  8:358121/1‑149 (MQ=255)                                                                                                                          cGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGccc                          <  6:193978/149‑1 (MQ=255)                                                                                                                            aTTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCgggg                                                                                      >  3:377540/1‑87 (MQ=255)                                                                                                                            aTTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCgggg                                                                                      <  4:377540/87‑1 (MQ=255)                                                                                                                               cccTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGAGTCATCGGTCTGAGCGGCGGGGCCGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCCAAGCAGCCCCAAAAAAAGCCCCTAg                      >  5:182839/1‑148 (MQ=255)                                                                                                                                ccTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGt                     >  2:293202/1‑148 (MQ=255)                                                                                                                                       tGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTa              >  8:352726/1‑148 (MQ=255)                                                                                                                                       tGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTa              >  3:22994/1‑148 (MQ=255)                                                                                                                                         aCCTATTGGGGACGCTTCGCGGCCCTGCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACa            <  8:284313/148‑1 (MQ=255)                                                                                                                                             aTTGGGGCCGCTTCGCGGCCCTTCGCGGGCACCCCCGCACTCACAAGAATAATAGGTATGAGCCGCGGGGCCGTAACAGTGGGAGCGGGCGTGCCCGCGAAAGGCAGCAAAGCAGCCCCAAAAAAATCCCCAACTTATGcaacaaaacc       >  6:325910/1‑145 (MQ=25)                                                                                                                                               tGGGGCtgctttgcagcccttcgcgggcacgcccgctcccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcggtgacgcctt     >  6:186058‑M1/1‑6 (MQ=255)                                                                                                                                                 gggCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAgccccaataggtcagatcagggaatcggtgacgccttcg   <  5:300461‑M2/149‑40 (MQ=255)                                                                                                                                                  ggCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCtgtg                                                                           >  6:50524/1‑76 (MQ=255)                                                                                                                                                  ggCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCtgtg                                                                           <  5:50524/76‑1 (MQ=255)                                                                                                                                                  ggCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAgccccaataggtcagatcagggaatcggtgacgccttcgc  <  4:66022‑M2/149‑41 (MQ=255)                                                                                                                                                    |                                                                                                                                                   GCACAAGGGCTACCCGACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGC‑GCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCT  >  NC_002947/1799695‑1799987

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.