New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1799841	72 (1.220)	5 (0.090)	5/242	NT	7.5%	intergenic (+11/‑176)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
	?	NC_002947	= 1799947	55 (0.980)					intergenic (+117/‑70)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha

CGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTGGTGCGGATCAAACCGCTGG  >  NC_002947/1799799‑1800095                                                                                                                                                     |                                                                                                                                                     cgcgcgAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCGCACAGGATTCATCGGTCTGAGCGGCGGGCCCGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAagca                                                                                                                                                      >  7:284313/1‑149 (MQ=255)       aaGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAgcccca                                                                                                                                                >  6:186058‑M2/1‑143 (MQ=255)               aCCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGCCACGCCCGCTCTCACAGGATTCATCGGGCTGAGCGGCGGGGCCGTACCTGGGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGc                                                                                                                                        <  3:54766/149‑1 (MQ=255)                ccGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGcc                                                                                                                                       >  8:358121/1‑149 (MQ=255)                 cGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGccc                                                                                                                                      <  6:193978/149‑1 (MQ=255)                      cccTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGAGTCATCGGTCTGAGCGGCGGGGCCGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCCAAGCAGCCCCAAAAAAAGCCCCTAg                                                                                                                                  >  5:182839/1‑148 (MQ=255)                       ccTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGt                                                                                                                                 >  2:293202/1‑148 (MQ=255)                              tGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTa                                                                                                                          >  8:352726/1‑148 (MQ=255)                              tGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTa                                                                                                                          >  3:22994/1‑148 (MQ=255)                                aCCTATTGGGGACGCTTCGCGGCCCTGCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACa                                                                                                                        <  8:284313/148‑1 (MQ=255)                                    aTTGGGGCCGCTTCGCGGCCCTTCGCGGGCACCCCCGCACTCACAAGAATAATAGGTATGAGCCGCGGGGCCGTAACAGTGGGAGCGGGCGTGCCCGCGAAAGGCAGCAAAGCAGCCCCAAAAAAATCCCCAACTTATGcaacaaaacc                                                                                                                   >  6:325910/1‑145 (MQ=25)                                        gggCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAgccccaataggtcagatcagggaatcggtgacgccttcg                                                                                                               <  5:300461‑M2/149‑40 (MQ=255)                                         ggCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAgccccaataggtcagatcagggaatcggtgacgccttcgc                                                                                                              <  4:66022‑M2/149‑41 (MQ=255)                                             gCTTCGCGGCCCTTCGCGGGCAGGCCCGCTCTCACAGGATTCATCGGGCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTc                                                                                                          <  6:182839/149‑1 (MQ=255)                                              ctgcgcgGCCCTTCGCGGGCACCCCCGCGCTCACCGGATTCATCGGTCTCCGCGCGGGGGCGGTACCTGTGGGCGCGGGCGGCCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCg                                                                                                         <  2:195116/146‑1 (MQ=37)                                              cTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCg                                                                                                         <  7:358121/149‑1 (MQ=255)                                              cTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCg                                                                                                         <  2:298999/149‑1 (MQ=255)                                                  gcgGCCGTTCGCGGTCACGCCCGCTCTCACAGTATTCATCGCTCTGAGCGGCGGGGCCGTACCTGTGGTAGCGGGGGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTaa                                                                                                     <  5:325910/149‑1 (MQ=38)                                                    ggCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCGAGTTAGGGTACCATCCCGCCCTTGTCGGTAAg                                                                                                    >  5:163731/1‑148 (MQ=38)                                                             cgGGCACGCCCGCTCTCACAGGATTCATCGGGCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACa                                                                                          <  4:22994/149‑1 (MQ=255)                                                              gggCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAg                                                                                         >  4:343807/1‑149 (MQ=255)                                                                gCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCATGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGa                                                                                       >  6:188332/1‑149 (MQ=255)                                                                  aCGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATc                                                                                     >  4:368727/1‑149 (MQ=255)                                                                    gCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCtt                                                                                   <  2:310533/149‑1 (MQ=255)                                                                    gCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCtt                                                                                   >  1:350685/1‑149 (MQ=255)                                                                     cccGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAgccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccgcaccggggc                                                                                  >  3:66022‑M2/1‑81 (MQ=255)                                                                      ccGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTcc                                                                                 >  7:67393/1‑149 (MQ=255)                                                                      ccGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTc                                                                                  >  6:253769/1‑148 (MQ=255)                                                                      ccGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGgccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccgcaccggggc                                                                                  <  1:159545‑M2/148‑69 (MQ=255)                                                                        gCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCAt                                                                               <  3:343807/149‑1 (MQ=255)                                                                              acaGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCaaaaaaa                                                                                                                                          >  5:98899/1‑84 (MQ=255)                                                                              acaGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGt                                                                         >  3:21827/1‑149 (MQ=255)                                                                              acaGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGt                                                                         >  3:151652/1‑149 (MQ=255)                                                                              acaGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGATGCAAAGCAGCCCCaaaaaaa                                                                                                                                          <  6:98899/84‑1 (MQ=255)                                                                                  gATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTccc                                                                     <  1:293202/149‑1 (MQ=255)                                                                                       aTCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCg                                                                 <  7:352726/148‑1 (MQ=255)                                                                                       aTCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGt                                                                >  1:25566/1‑149 (MQ=255)                                                                                       aTCGGGCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGt                                                                <  2:79683/149‑1 (MQ=255)                                                                                        tCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGtt                                                               <  4:21827/149‑1 (MQ=255)                                                                                           gtcgcaGCGGCGGGGCCGTACCTGTGGCAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCAc                                                            <  8:56175/144‑1 (MQ=255)                                                                                           gTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCAc                                                            >  7:132511/1‑149 (MQ=255)                                                                                                aGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGgccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccgcaccggggcgaaggaacgccgatgaatgggcgtag                                                        >  2:159545‑M2/1‑54 (MQ=255)                                                                                                 gcggcgGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCGCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTgcgc                                                      >  7:479/1‑149 (MQ=255)                                                                                                     cggGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTAGAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTc                                                   >  4:138961/1‑148 (MQ=255)                                                                                                      ggggCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCa                                                 <  8:479/149‑1 (MQ=255)                                                                                                          ccGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTcc                                             <  2:350685/149‑1 (MQ=255)                                                                                                           cGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATc                                                                                                                     <  5:88863/76‑1 (MQ=255)                                                                                                           cGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATc                                                                                                                     >  6:88863/1‑76 (MQ=255)                                                                                                            gTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCg                                            >  8:156129/1‑148 (MQ=255)                                                                                                            gTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGa                                           <  8:132511/149‑1 (MQ=255)                                                                                                                   tgGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATtctc                                     <  4:151652/148‑1 (MQ=255)                                                                                                                     ggAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGc                                   <  2:25566/148‑1 (MQ=255)                                                                                                                     ggAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGc                                   <  3:362267/148‑1 (MQ=255)                                                                                                                                  ccGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGCTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTg                     >  6:167222/1‑149 (MQ=255)                                                                                                                                   cgcgAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTc                              <  6:165052/139‑1 (MQ=255)                                                                                                                                   cgcgAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTc                              >  5:165052/1‑139 (MQ=255)                                                                                                                                    gcgAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCAGCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTGGt                   >  5:331063/1‑149 (MQ=255)                                                                                                                                      ttggggCTGCTTTGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTGGTGc                 >  1:203786/4‑149 (MQ=255)                                                                                                                                      gAAGGGCTGCAAAGCAGCCACAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTTTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTAGTTCACCTGCGAGTCCACTCCGAATTCTCGCTGGTCGACGGCCTGGTGc                 <  7:175369/149‑1 (MQ=255)                                                                                                                                             tGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTc                                                                       <  2:67586/88‑1 (MQ=255)                                                                                                                                             tGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTc                                                                       >  1:67586/1‑88 (MQ=255)                                                                                                                                             cgCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTGGTGCGGATCa           >  8:360293/2‑148 (MQ=255)                                                                                                                                               cAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCGTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCAACTCCGAATTCTCGCTGGTCGACGGCCTGGTGGGGATCAAAc        >  6:323759/1‑149 (MQ=255)                                                                                                                                               cAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTGGTGCGGATCaaa         <  5:188332/148‑1 (MQ=255)                                                                                                                                                   gcagccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccgcaccggggcgaaggaacgccgatgaatgggcgtaggcccaagacgtgccaacgcctcgagatgcaccggggtcgggtagcccttgtg    >  6:300461‑M2/1‑3 (MQ=255)                                                                                                                                                   gcagcCCCAAAAAAAGCCCCTAGTTA‑GCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCCCGTCCACTCCGAATTCTCGCTGGACGACGGCCTGGTGCGGATCAAACCGCTg   >  4:244689/1‑149 (MQ=255)                                                                                                                                                    cagcCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTGGTGCGGATCAAACCGCTg   <  2:203786/149‑1 (MQ=255)                                                                                                                                                     agcCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGGTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTGGTGCGGATCAAACCGCTgg  <  7:20375/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTGGTGCGGATCAAACCGCTGG  >  NC_002947/1799799‑1800095

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.