New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1845868	53 (0.900)	3 (0.050)	3/244	NT	5.1%	coding (159/1377 nt)	pfeS‑II	histidine kinase
	?	NC_002947	= 1845921	62 (1.100)					coding (212/1377 nt)	pfeS‑II	histidine kinase

ATTCGCTGTTCTGGAAGCTGGCCATCTTGCTGGTGGGCTTCTGCCTGCTGATGATCGGCCTCAGTTATACCTGGGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTCGACATCAACCTGCGCCCGCTCGACAGCGCCACACTCAACCCACAGATCATGC  >  NC_002947/1845723‑1846016                                                                                                                                                   |                                                                                                                                                     aTTCGCTGTTCTGGAAGCTGGCCATCTTGCTGGTGGGCTTCTGCCTGCTGATGATCGGCCTCAGTTATACCTGGGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGccgccg                                                                                                                                                     >  5:169081/1‑147 (MQ=255)  ttCGCTGTTCTGGAAGCTGGCCATCTTGCTGGTGGGCTTCTGCCTGCTGATGATCGGCCTCAGTTATACCTGGGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAg                                                                                                                                                  >  8:202121/1‑149 (MQ=255)   tCGCTGTTCTGGAAGCTGGCCATCTTGCTGGTGGGCTTCTGCCTGCTGATGATCGGCCTCAGTTATACCTGGGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGc                                                                                                                                                 >  5:154161/1‑149 (MQ=255)           cTGGAAGCTGGCCATCTTGCTGGTGGGCTTCTGCCTGCTGATGATCGGCCTCAGTTATACCTGGGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAg                                                                                                                                          <  7:191874/148‑1 (MQ=255)               aaGCTGGCCATCTTGCTGGTGGGCTTCTGCCTGCTGATGATCGGCCTCAGTTATACGTGGGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTg                                                                                                                                     <  7:202121/149‑1 (MQ=255)                           ttGCTGGTGGGCTTCTGCCTGCTGATGATCGGCCTCAGTTATACCTGGGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTggcgg                                                                                                                         >  5:115885/1‑149 (MQ=255)                              cTGGTGGGCTTCTGCCTGCTGATGATCGGCCTCAGTTATACCTGGGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTggcgggcg                                                                                                                      >  3:194824/1‑149 (MQ=255)                               tggtggGCTTCTGCCTGCTGATGATCGGCCTCAGTTATACCTGGGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGgcgggcgg                                                                                                                     <  4:172654/149‑1 (MQ=255)                                 gtggGCTTCTGCCTGCTGATGATCGGCCTCAGTTATACCTGGGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGcgggcggg                                                                                                                    >  8:47501/1‑148 (MQ=255)                                   ggccTTCTGCCTGCTGATGATCGGCCTCAGTTATACCTGGGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAg                                                                                                                 <  3:71569/146‑1 (MQ=255)                                       ctCTGCCTGCTGATGATCGGCCTCAGTTATACCTGGGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTggcgg                                                                                                                         <  6:281214/136‑1 (MQ=255)                                       ctCTGCCTGCTGATGATCGGCCTCAGTTATACCTGGGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTggcgg                                                                                                                         >  5:281214/2‑137 (MQ=255)                                            cctgcTGATGATCGGCCTCAGTTATACCTGGGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTgg                                                                                                           <  5:230809/146‑1 (MQ=255)                                            cctgcTGATGATCGGCCTCAGTTATACCTGGGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGAc                                                                                                         <  6:115885/148‑1 (MQ=255)                                              tgctgATGATCGGCCTCAGTTATACCTGGGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAg                                                                                                      >  2:238707/1‑149 (MQ=255)                                                ctgATGATCGGCCTCAGTTATACCTGGGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAgt                                                                                                     <  6:154161/148‑1 (MQ=255)                                                   tgtgccGGCCCCAGGTATAACTGAGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAgtgggt                                                                                                 >  7:8824/6‑149 (MQ=255)                                                    tGATCGGCCTCAGTTATACCTGGGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTg                                                                                                >  6:122488‑M2/1‑148 (MQ=255)                                                      aTCGGCCTCAGTTATACCTGGGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTggc                                                                                              >  1:26117‑M2/1‑146 (MQ=255)                                                       ccgGCCCCAGGTATAACTGAGGCCGGCACATGGAAACCCAGAAAGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTggcg                                                                                             <  1:78219‑M2/148‑5 (MQ=255)                                                       ccGGCCCCAGGTATAACTGAGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAGCCCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGaa                                                                                                                                                   <  1:248584/95‑1 (MQ=38)                                                       ccGGCCCCAGGTATAACTGAGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGaa                                                                                                                                                   >  2:248584/2‑95 (MQ=39)                                                           ccTCAGTTATACCTGGGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCacccactggtccagccctgcccgcccgccactgcgccaggcctgttcagcttcggcggcat                                                                                         <  5:107547‑M1/149‑62 (MQ=255)                                                           ccTCAGTTATACCTGGGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCacccactggtccagccctgcccgcccgccactgcgccaggcctgttcagcttcggcggca                                                                                          >  8:289359‑M1/1‑88 (MQ=255)                                                            cTCAGTTATACCTGGGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCAt                                                                                        >  7:30371/1‑149 (MQ=255)                                                             tCAGTTATACCTGGGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATg                                                                                       >  3:144115/1‑149 (MQ=255)                                                               aGTTATACCTGGGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCacccactggtccagccctgcccgcccgccactgcgccaggcctgttcagcttcggcggcataa                                                                                       <  7:289359‑M1/147‑64 (MQ=255)                                                                 ttATACCTGGGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATc                                                                                   >  7:288746/1‑149 (MQ=255)                                                                      ccTGGGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAgcgc                                                                              >  3:242926/1‑149 (MQ=255)                                                                            gCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGTAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACgg                                                                        >  1:248503/1‑149 (MQ=255)                                                                             ccGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATc                                                                                   <  1:206066/137‑1 (MQ=255)                                                                             ccGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATc                                                                                   >  2:206066/1‑137 (MQ=255)                                                                                gCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCATGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCt                                                                    <  1:79300/149‑1 (MQ=255)                                                                                gCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCt                                                                    <  8:8824/149‑1 (MQ=255)                                                                                  acaTGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTgg                                                                  <  8:30371/149‑1 (MQ=255)                                                                                   caTGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGgc                                                                                                                                   <  5:253055/83‑1 (MQ=255)                                                                                   caTGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGgc                                                                                                                                   >  6:253055/1‑83 (MQ=255)                                                                                              aGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTc                                                      <  1:238707/149‑1 (MQ=255)                                                                                              aGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTc                                                      <  4:242926/149‑1 (MQ=255)                                                                                              aGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTc                                                      <  4:144115/149‑1 (MQ=255)                                                                                                aaTGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTCg                                                     >  8:66661/1‑148 (MQ=255)                                                                                                aaTGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTCGa                                                    >  7:42028/1‑149 (MQ=255)                                                                                                 aTGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTCGa                                                    >  5:25709/1‑148 (MQ=255)                                                                                                    ccTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTCGACAt                                                 >  7:306022/1‑148 (MQ=255)                                                                                                        ccTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTCGACATCAAc                                             <  7:47501/148‑1 (MQ=255)                                                                                                        ccTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTCGACATCAAc                                             <  4:194824/148‑1 (MQ=255)                                                                                                          tctcGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCACGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTCGACATCAACCTg                                          >  5:116592/1‑149 (MQ=255)                                                                                                            tcGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTCGACATCACCCTgcg                                        >  2:274844/1‑149 (MQ=255)                                                                                                            tcGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTCGACATCAACCTgcg                                        >  7:25467/1‑149 (MQ=255)                                                                                                            tcGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTCGACATCAACCTgcg                                        >  3:363864/1‑149 (MQ=255)                                                                                                             cGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTCGACATCAACCTgcgc                                       >  1:218021/1‑149 (MQ=255)                                                                                                             cGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGACGCCGAAGCTGAACAGGCCTGGCTCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTCGACATCAACCTgcgc                                       >  1:212238/1‑149 (MQ=255)                                                                                                                   ccGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTCGACATCAACCTGCGCCCGCt                                  >  3:96905/1‑149 (MQ=255)                                                                                                                      gCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTCGACATCAACCTGCGCCCGCTCGa                               >  7:138763/1‑149 (MQ=255)                                                                                                                          gCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTCGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTCGACATCAACCTGCGCCCGCTCGACAgc                           >  7:329112/1‑149 (MQ=255)                                                                                                                           ccAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTCGACATCAACCTGCGCCCGCTCGACAgcg                          >  5:18624/1‑149 (MQ=255)                                                                                                                                  ttGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTCGACATCAACCTGCGCCCGCTCGACAGCGCCACACt                   >  3:68747/1‑149 (MQ=255)                                                                                                                                    gCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTCGACATCAACCTGCGCCCGCTCGACAGCGCCACACTc                  <  8:42028/148‑1 (MQ=255)                                                                                                                                    gCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGGGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTCGACATCAACCTGCGCCCGCTCGACAGCGCCACACt                   <  2:137738/147‑1 (MQ=255)                                                                                                                                     cGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTCGACATCAACCTGCGCCCGCTCGACAGCGCCACACTCaa                <  4:68747/149‑1 (MQ=255)                                                                                                                                      ggggTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTCGACATCAACCTGCGCCCGCTCGACAGCGCCACACTCAAc               >  6:113165/1‑149 (MQ=255)                                                                                                                                          ttATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTggcggcataaccccgcaaggtctggcgtgccggctccgagaggaaggcattctgggtttccatgtgccggccccaggtataact             <  7:289359‑M2/147‑85 (MQ=255)                                                                                                                                            aTGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTggcggcataaccccgcaaggtctggcgtgccggctccgagaggaaggcattctgggtttccatgtgccggccccaggtataactgagg         <  5:107547‑M2/149‑89 (MQ=255)                                                                                                                                             tGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTggcggcataaccccgcaaggtctggcgtgccggctccgagaggaaggcattctgggtttccatgtgccggccccaggtataactgagg         >  8:289359‑M2/1‑60 (MQ=255)                                                                                                                                             tGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAgc                                                                                <  6:283362/77‑1 (MQ=255)                                                                                                                                             tGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAgc                                                                                >  5:283362/1‑77 (MQ=255)                                                                                                                                             tGCCGCCGAAGCTGAACAGGCCTGGCGCAGGGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTCGACATCAACCTGCGCCCGCTCGACAGCGCCACACTCAACCCACAGa        <  2:59648/149‑1 (MQ=255)                                                                                                                                               ccgccgAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTCGACATCAACCTGCGCCCGCTCGACAGCGCCACACTCAACCCACAGAt       >  2:298745/1‑148 (MQ=255)                                                                                                                                                cgccacccactggtccagccctgcccgcccgccactgcgccaggcctgttcagcttcggcggcataaccccgcaaggtctggcgtgccggctccgagaggaaggctttctgggtttccatgtgccggcctcagttatacctggggccgg     <  1:78219‑M1/149‑146 (MQ=255)                                                                                                                                                 gccgAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTCGACATCAACCTGCGCCCGCTCGACAGCGCCACACTCAACCCACAGATCAt    <  7:66661/149‑1 (MQ=255)                                                                                                                                                 gccacccactggtccagccctgcccgcccgccactgcgccaggcctgttcagcttcggcggcataaccccgcaaggtctggcgtgccggctccgagaggaaggcattctgggtttccatgtgccggccccaggtataactgaggccgat    >  1:26117‑M1/1‑3 (MQ=255)                                                                                                                                                  ccgAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTCGACATCAACCTGCGCCCGCTCGACAGCGCCACACTCAACCCACAGATCATg   <  6:169081/149‑1 (MQ=255)                                                                                                                                                   cacccactggtccagccctgcccgcccgccactgcgccaggcctgttcagcttcggcggcataaccccgcaaggtctggcgtgccggctccgagaggaaggcattctgggtttccatgtgccggccccaggtataactgaggccgatca  >  6:122488‑M1/1‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                     ATTCGCTGTTCTGGAAGCTGGCCATCTTGCTGGTGGGCTTCTGCCTGCTGATGATCGGCCTCAGTTATACCTGGGGCCGGCACATGGAAACCCAGAATGCCTTCCTCTCGGAG‑CCGGCACGCCAGACCTTGCGGGGTTATGCCGCCGAAGCTGAACAGGCCTGGCGCAGTGGCGGGCGGGCAGGGCTGGACCAGTGGGTGGCGGCCATGCATCAGCGCGAACGGGGCTGGGTCGGGGTGCTCGACATCAACCTGCGCCCGCTCGACAGCGCCACACTCAACCCACAGATCATGC  >  NC_002947/1845723‑1846016

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.