New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2071179	51 (0.860)	4 (0.080)	4/220	NT	7.8%	intergenic (+131/+96)	PP_1846/PP_1847	group II intron‑encoding maturase/TonB‑dependent ferric siderophore receptor
	?	NC_002947	= 2071216	51 (1.000)					intergenic (+168/+59)	PP_1846/PP_1847	group II intron‑encoding maturase/TonB‑dependent ferric siderophore receptor

GCCGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAA  >  NC_002947/2071035‑2071325                                                                                                                                                  |                                                                                                                                                    gCCGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGcc                                                                                                                                                  >  1:330563/1‑148 (MQ=255)       tAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGcc                                                                                                                                                  >  6:139012/1‑142 (MQ=255)       tAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGcc                                                                                                                                                  <  5:139012/142‑1 (MQ=255)           cTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCgtggt                                                                                                                                       <  3:21591/149‑1 (MQ=255)           cTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCgtggt                                                                                                                                       <  2:254234/149‑1 (MQ=255)              aaCCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGa                                                                                                                                    <  1:292884/149‑1 (MQ=255)                ccgccgTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATg                                                                                                                                  <  1:241154/149‑1 (MQ=255)                   ccgTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCa                                                                                                                               >  4:149969/1‑149 (MQ=255)                     gtgtACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACg                                                                                                                             >  5:355241/1‑149 (MQ=255)                     gtgtACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACg                                                                                                                             <  2:330563/149‑1 (MQ=255)                      tgtACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACACGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACgg                                                                                                                            >  8:182473/1‑149 (MQ=255)                      tgtACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACgg                                                                                                                            >  5:380761/1‑149 (MQ=255)                          cGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCACATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCtt                                                                                                                        <  3:166599/149‑1 (MQ=255)                                     gCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGttc                                                                                                            >  5:178305‑M2/1‑146 (MQ=255)                                     gCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGttc                                                                                                            <  8:259859‑M2/149‑4 (MQ=255)                                          gtggtgTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGttcgcggg                                                                                                       <  3:289131‑M2/149‑9 (MQ=255)                                                 gagaGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGttcgcgggcaagc                                                                                                  <  1:14997‑M2/147‑14 (MQ=255)                                                 gagaGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGttcgcgggcaagc                                                                                                  >  2:14997‑M2/1‑134 (MQ=255)                                                  agagGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGttcgcgggcaagcccg                                                                                               <  2:200845‑M2/149‑17 (MQ=255)                                                   gagGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCATGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGttcgcgggcaagcccg                                                                                               <  1:289168‑M2/149‑17 (MQ=255)                                                      gACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTcc                                                                                           >  7:121699/1‑149 (MQ=255)                                                      gACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTcc                                                                                           >  8:165827/1‑149 (MQ=255)                                                              gtgtGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTc                                                                                   >  6:157343/1‑149 (MQ=255)                                                                 tgAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTcgc                                                                                 <  2:89949/148‑1 (MQ=255)                                                                   aaTCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGa                                                                               >  7:324720/1‑148 (MQ=255)                                                                     tCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAg                                                                            <  1:200845/149‑1 (MQ=255)                                                                        gCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGc                                                                         <  5:157343/149‑1 (MQ=255)                                                                        gCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGc                                                                         >  1:332828/1‑149 (MQ=255)                                                                            cctACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGcacgg                                                                     >  1:324637/1‑145 (MQ=255)                                                                                cTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAcacgggcgaagcccgtgccatccaccacggtgttggcttcgcg                                                                                                          <  4:92991‑M1/109‑44 (MQ=255)                                                                                cTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAcacgggcgaagcccgtgccatccaccacggtgttggcttcgcg                                                                                                          >  3:92991‑M1/1‑66 (MQ=255)                                                                                cTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACgg                                                                                                                            >  7:341804/1‑91 (MQ=255)                                                                                cTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACgg                                                                                                                            <  8:341804/91‑1 (MQ=255)                                                                                cTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCca                                                                                         <  2:38251/125‑1 (MQ=255)                                                                                cTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCca                                                                                         >  1:38251/1‑125 (MQ=255)                                                                                 tCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCcac                                                                                        >  3:288624/1‑125 (MQ=255)                                                                                 tCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAgg                                                                           >  2:53624/1‑138 (MQ=255)                                                                                 tCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAgg                                                                           <  1:53624/138‑1 (MQ=255)                                                                                 tCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCg                                                                >  7:216700/1‑149 (MQ=255)                                                                                   gATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCg                                                                <  2:289168/147‑1 (MQ=255)                                                                                        tCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCACACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCg                                                          <  4:133092/148‑1 (MQ=255)                                                                                          aGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCTCTGCGGccctttc                                                        <  7:165827/148‑5 (MQ=255)                                                                                          aGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGc                                                        >  6:276363/1‑148 (MQ=255)                                                                                          aGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGc                                                        >  1:228831/1‑148 (MQ=255)                                                                                          aGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGGGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCTCTGCGGccctttc                                                        <  7:259859/148‑5 (MQ=25)                                                                                           gggCCATTGGGGC‑GGCTGTCCAGCCCAGCGCCACCCACGCGGGCTGCCCCGCGAACCCAACACCGTGGGGTATGCCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCTAAAGGGCCGCAGAGCGGCCCCGGCaa                                                      <  6:380761/149‑1 (MQ=21)                                                                                              cctttGGGGC‑TGCGGTGCAGCCCAGCGCCACACAAGCGGGCTTGCCCGCTAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCGGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCt                                                   <  8:259238/146‑1 (MQ=25)                                                                                               cttgggggC‑TGGGGTGCCGCCCATGGCGACACACGGGGGCTTGCCCGCTAAGCAAACACCGTGGTGTAGGGCAGGGGTTGCC‑CCGGTGTTCGCGGCAAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTa                                                  <  4:289131/145‑1 (MQ=255)                                                                                                         tgctgTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGc                                                                                                                                                   >  6:189518/1‑44 (MQ=255)                                                                                                         tgctgTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGc                                                                                                                                                   <  5:189518/44‑1 (MQ=255)                                                                                                                cAGCCCATCGCTACACAAGCGGGCTTGCCCGCTAAGCCAACACGGTGGTGTATGGCACGGGCTTCG‑CCCGTGTTCGCGGGAAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGaagcc                                  <  2:324637/149‑1 (MQ=37)                                                                                                                cAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGaagcc                                  <  5:276363/149‑1 (MQ=255)                                                                                                                 aGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAcacgggcgaagcccgtgccatccaccacggtgttggcttcgcgg                                                                                                         >  4:112822‑M1/1‑34 (MQ=255)                                                                                                                 aGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAcacgggcgaagcccgtgccatccaccacggtgttggcttcgcgg                                                                                                         <  3:112822‑M1/78‑45 (MQ=255)                                                                                                                    ccATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGaagccgaaa                              <  6:355241/149‑1 (MQ=255)                                                                                                                      aTCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGaagccgaaagc                            >  1:10124/1‑149 (MQ=255)                                                                                                                      aTCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAAGCGAGAAGCTGATCGaagccgaaagc                            >  5:242141/1‑149 (MQ=255)                                                                                                                          cgACACAAGCGGGCTTGCCCGCTAAGCCAACACCGTGGTGGATGGCAGGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAg                        <  7:30508/149‑1 (MQ=255)                                                                                                                           gACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGc                       >  8:317002/1‑149 (MQ=255)                                                                                                                             cacaTGCGGGCTTGCCCGCCAACCCACCCCGGTGGTGTATGGCAGGGCGTTCG‑CCGGTTTTCGCGGGCATGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGc                       <  2:10124/147‑1 (MQ=255)                                                                                                                              acaAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGaagccgaaag                             <  5:131068/140‑1 (MQ=255)                                                                                                                              acaAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGaagccgaaag                             >  6:131068/1‑140 (MQ=255)                                                                                                                                   cGGGCTTGCCCGCGAAcacgggcgaagcccgtgccatccaccacggtgttggcttcgcgggcaagcccgcttgtgtcgcgatgggctgcacagcatgccccaatggccctgaaaatcgagtaggaggcggattcacacccgccgtcctc                <  1:289168‑M1/149‑134 (MQ=255)                                                                                                                                   cGGGCTTGCCCGCGAAcacgggcgaagcccgtgccatccaccacggtgttggcttcgcgggcaagcccgcttgtgtcgcgatgggctgcacagcagccccaatggccctgaaaatcgagtaggaggcggattcacacccgccgtcctct                <  2:200845‑M1/149‑134 (MQ=255)                                                                                                                                      gCTTGCCCGCGAAcacgggcgaagcccgtgccatccaccacggtgttggcttcgcgggcaagcccgcttgtgtcgcgatgggctgcacagcagccccaatggccctgaaaatcgagtaggaggcggattcacacccgccgtcctctc               >  2:14997‑M1/1‑13 (MQ=255)                                                                                                                                      gCTTGCCCGCGAAcacgggcgaagcccgtgccatccaccacggtgttggcttcgcgggcaagcccgcttgtgtcgcgatgggctgcacagcagccccaatggccctgaaaatcgagtaggaggcggattcacacccgccgtcctctc               <  1:14997‑M1/147‑135 (MQ=255)                                                                                                                                        ttGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTggc          >  1:176863/1‑147 (MQ=255)                                                                                                                                           cccGCGAAcacgggcgaagcccgtgccatccaccacggtgttggcttcgcgggcaagcccgcttgtgtcgcgatgggctgcacagcagccccaatggccctgaaaatcgagtaggaggcggattcacacccgccgtcctctcacaccac        <  3:289131‑M1/149‑142 (MQ=255)                                                                                                                                            ccGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGttcgcgggcaagcccgcttgtgtcgcgatgggct                                                                             <  3:112822‑M2/78‑35 (MQ=255)                                                                                                                                            ccGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGttcgcgggcaagcccgcttgtgtcgcgatgggct                                                                             >  4:112822‑M2/1‑44 (MQ=255)                                                                                                                                            ccGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCt      >  2:64538/1‑149 (MQ=255)                                                                                                                                            ccGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCt      >  7:287529/1‑149 (MQ=255)                                                                                                                                            ccGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCt      >  5:349227/1‑149 (MQ=255)                                                                                                                                             cgcgAAGCCAACACTGTGGTGGATGGCACGGGCTTCGTCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGAAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCt      >  1:259386/1‑149 (MQ=255)                                                                                                                                             cgcgAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGttcgcgggcaagcccgcttgtgtcgcgatgggctgcacagcagccccaatggccctgaaaatcgag                                             >  3:92991‑M2/1‑43 (MQ=255)                                                                                                                                             cgcgAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGttcgcgggcaagcccgcttgtgtcgcgatgggctgcacagcagccccaatggccctgaaaatcgag                                             <  4:92991‑M2/109‑67 (MQ=255)                                                                                                                                                gAAcacgggcgaagcccgtgccatccaccacggtgttggcttcgcgggcaagcccgcttgtgtcgcgatgggctgcacagcagccccaatggccctgaaaatcgagtaggaggcggattcacacccgccgtcctctcacaccaccgtgc   <  8:259859‑M1/149‑147 (MQ=255)                                                                                                                                                gAAcacgggcgaagcccgtgccatccaccacggtgttggcttcgcgggcaagcccgcttgtgtcgcgatgggctgcacagcagccccaatggccctgaaaatcgagtaggaggcggattcacacccgccgtcctctcacaccaccgtgc   >  5:178305‑M1/1‑3 (MQ=255)                                                                                                                                                gAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGCAAGCCGAGCGGTACGCGGTGCCCCCTGGaa  >  1:194983/1‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                    GCCGCGTAACCTGAACCGCCGTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAA  >  NC_002947/2071035‑2071325

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.