New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2071179	51 (0.860)	4 (0.080)	4/220	NT	7.8%	intergenic (+131/+96)	PP_1846/PP_1847	group II intron‑encoding maturase/TonB‑dependent ferric siderophore receptor
	?	NC_002947	= 2071216	51 (1.000)					intergenic (+168/+59)	PP_1846/PP_1847	group II intron‑encoding maturase/TonB‑dependent ferric siderophore receptor

GCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAGGTAATCCCCCACATCGCGC  >  NC_002947/2071071‑2071362                                                                                                                                                    |                                                                                                                                                   gCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGttc                                                                                                                                                 >  5:178305‑M2/1‑146 (MQ=255) gCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGttc                                                                                                                                                 <  8:259859‑M2/149‑4 (MQ=255)      gtggtgTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGttcgcggg                                                                                                                                            <  3:289131‑M2/149‑9 (MQ=255)             gagaGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGttcgcgggcaagc                                                                                                                                       <  1:14997‑M2/147‑14 (MQ=255)             gagaGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGttcgcgggcaagc                                                                                                                                       >  2:14997‑M2/1‑134 (MQ=255)              agagGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGttcgcgggcaagcccg                                                                                                                                    <  2:200845‑M2/149‑17 (MQ=255)               gagGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGCATGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGttcgcgggcaagcccg                                                                                                                                    <  1:289168‑M2/149‑17 (MQ=255)                  gACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTcc                                                                                                                                >  7:121699/1‑149 (MQ=255)                  gACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTcc                                                                                                                                >  8:165827/1‑149 (MQ=255)                          gtgtGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTc                                                                                                                        >  6:157343/1‑149 (MQ=255)                             tgAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTcgc                                                                                                                      <  2:89949/148‑1 (MQ=255)                               aaTCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGa                                                                                                                    >  7:324720/1‑148 (MQ=255)                                 tCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAg                                                                                                                 <  1:200845/149‑1 (MQ=255)                                    gCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGc                                                                                                              >  1:332828/1‑149 (MQ=255)                                    gCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGc                                                                                                              <  5:157343/149‑1 (MQ=255)                                        cctACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGcacgg                                                                                                          >  1:324637/1‑145 (MQ=255)                                            cTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCca                                                                                                                              >  1:38251/1‑125 (MQ=255)                                            cTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCca                                                                                                                              <  2:38251/125‑1 (MQ=255)                                             tCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCcac                                                                                                                             >  3:288624/1‑125 (MQ=255)                                             tCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAgg                                                                                                                >  2:53624/1‑138 (MQ=255)                                             tCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAgg                                                                                                                <  1:53624/138‑1 (MQ=255)                                             tCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCg                                                                                                     >  7:216700/1‑149 (MQ=255)                                               gATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCg                                                                                                     <  2:289168/147‑1 (MQ=255)                                                    tCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCACACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCg                                                                                               <  4:133092/148‑1 (MQ=255)                                                      aGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCTCTGCGGccctttc                                                                                             <  7:165827/148‑5 (MQ=255)                                                      aGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGc                                                                                             >  6:276363/1‑148 (MQ=255)                                                      aGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGc                                                                                             >  1:228831/1‑148 (MQ=255)                                                      aGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGGGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCTCTGCGGccctttc                                                                                             <  7:259859/148‑5 (MQ=25)                                                       gggCCATTGGGGC‑GGCTGTCCAGCCCAGCGCCACCCACGCGGGCTGCCCCGCGAACCCAACACCGTGGGGTATGCCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCTAAAGGGCCGCAGAGCGGCCCCGGCaa                                                                                           <  6:380761/149‑1 (MQ=21)                                                          cctttGGGGC‑TGCGGTGCAGCCCAGCGCCACACAAGCGGGCTTGCCCGCTAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCGGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCt                                                                                        <  8:259238/146‑1 (MQ=25)                                                           cttgggggC‑TGGGGTGCCGCCCATGGCGACACACGGGGGCTTGCCCGCTAAGCAAACACCGTGGTGTAGGGCAGGGGTTGCC‑CCGGTGTTCGCGGCAAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTa                                                                                       <  4:289131/145‑1 (MQ=255)                                                                            cAGCCCATCGCTACACAAGCGGGCTTGCCCGCTAAGCCAACACGGTGGTGTATGGCACGGGCTTCG‑CCCGTGTTCGCGGGAAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGaagcc                                                                       <  2:324637/149‑1 (MQ=37)                                                                            cAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGaagcc                                                                       <  5:276363/149‑1 (MQ=255)                                                                                ccATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGaagccgaaa                                                                   <  6:355241/149‑1 (MQ=255)                                                                                  aTCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGaagccgaaagc                                                                 >  1:10124/1‑149 (MQ=255)                                                                                  aTCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAAGCGAGAAGCTGATCGaagccgaaagc                                                                 >  5:242141/1‑149 (MQ=255)                                                                                      cgACACAAGCGGGCTTGCCCGCTAAGCCAACACCGTGGTGGATGGCAGGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAg                                                             <  7:30508/149‑1 (MQ=255)                                                                                       gACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGc                                                            >  8:317002/1‑149 (MQ=255)                                                                                         cacaTGCGGGCTTGCCCGCCAACCCACCCCGGTGGTGTATGGCAGGGCGTTCG‑CCGGTTTTCGCGGGCATGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGc                                                            <  2:10124/147‑1 (MQ=255)                                                                                          acaAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGaagccgaaag                                                                  >  6:131068/1‑140 (MQ=255)                                                                                          acaAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGaagccgaaag                                                                  <  5:131068/140‑1 (MQ=255)                                                                                                    ttGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTggc                                               >  1:176863/1‑147 (MQ=255)                                                                                                        ccGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGttcgcgggcaagcccgcttgtgtcgcgatgggct                                                                                                                  >  4:112822‑M2/1‑44 (MQ=255)                                                                                                        ccGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGttcgcgggcaagcccgcttgtgtcgcgatgggct                                                                                                                  <  3:112822‑M2/78‑35 (MQ=255)                                                                                                        ccGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCt                                           >  5:349227/1‑149 (MQ=255)                                                                                                        ccGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCt                                           >  2:64538/1‑149 (MQ=255)                                                                                                        ccGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCt                                           >  7:287529/1‑149 (MQ=255)                                                                                                         cgcgAAGCCAACACTGTGGTGGATGGCACGGGCTTCGTCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGAAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCt                                           >  1:259386/1‑149 (MQ=255)                                                                                                         cgcgAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGttcgcgggcaagcccgcttgtgtcgcgatgggctgcacagcagccccaatggccctgaaaatcgag                                                                                  <  4:92991‑M2/109‑67 (MQ=255)                                                                                                         cgcgAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGttcgcgggcaagcccgcttgtgtcgcgatgggctgcacagcagccccaatggccctgaaaatcgag                                                                                  >  3:92991‑M2/1‑43 (MQ=255)                                                                                                            gAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGCAAGCCGAGCGGTACGCGGTGCCCCCTGGaa                                       >  1:194983/1‑149 (MQ=255)                                                                                                                ccAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAgg                                   >  8:188120/1‑149 (MQ=255)                                                                                                                 cAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGccccc                                            >  5:199229/1‑139 (MQ=255)                                                                                                                 cAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGt                                  <  7:188120/149‑1 (MQ=255)                                                                                                                  aaCACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAATGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTa                                 <  6:349227/149‑1 (MQ=255)                                                                                                                  aaCACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGc                                                                                  >  1:40044/1‑100 (MQ=255)                                                                                                                  aaCACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGc                                                                                  <  2:40044/100‑1 (MQ=255)                                                                                                                       cGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTAt                            >  2:357352/1‑149 (MQ=255)                                                                                                                          ggtggATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGaagc                                                                        <  5:24564/102‑1 (MQ=255)                                                                                                                          ggtggATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGaagc                                                                        >  6:24564/1‑102 (MQ=255)                                                                                                                            tggTTGGCAGGGGGTGGG‑CCGGTGTGCGCGGGAAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATccccc                       <  8:324720/149‑1 (MQ=255)                                                                                                                              gATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGGAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAg                     <  2:259386/149‑1 (MQ=255)                                                                                                                                 ggCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGccccc                                            >  1:176865/1‑123 (MQ=255)                                                                                                                                  gCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAGGTa                  <  2:228831/148‑1 (MQ=255)                                                                                                                                    aCGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGcccc                                                                                                <  2:240227/68‑1 (MQ=255)                                                                                                                                    aCGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGcccc                                                                                                >  1:240227/1‑68 (MQ=255)                                                                                                                                         cTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAGGTAATCCCCca          <  1:64538/149‑1 (MQ=255)                                                                                                                                                  gtgtTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAGGTAATCCCCCACATCgcgc  <  7:317002/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                   GCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTTTCAGGGCCATTGGGGC‑TGCTGTGCAGCCCATCGCGACACAAGCGGGCTTGCCCGCGAAGCCAACACCGTGGTGGATGGCACGGGCTTCG‑CCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGTCGCGAAAGGGCCGCAGAGCGGCCCCGGCAATCTAGAAGCTGATCGAAGCCGAAAGCCGAGCGGTACGCGGTGCCCCCTGGAACAGGTAGTTATCCCCCAGGTAATCCCCCACATCGCGC  >  NC_002947/2071071‑2071362

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.