New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2975706 =	57 (0.960)	4 (0.070)	4/246	NT	6.9%	coding (724/1053 nt)	ligC	4‑carboxy‑2‑hydroxymuconate‑6‑semialdehyde dehydrogenase
	?	NC_002947	2975794 =	54 (0.950)					coding (812/1053 nt)	ligC	4‑carboxy‑2‑hydroxymuconate‑6‑semialdehyde dehydrogenase

TGCAGGTGCAGGCCTTCACCCGCAACGATGTCCGCGGTTTTGCCAACGAAGACAGCGCCGCGGTGCTGCTGCAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTCCCCAGCTCAAGCGCTGGCATTACGCCGAGGCAGGCTCGGGCTGGCATACGCCCCTGTTGCAAAGTTC  >  NC_002947/2975560‑2975854                                                                                                                                                   |                                                                                                                                                     gatcagcggcgcctgttcaccccgggcaacacgcacaaaatgctgcaattgcagggtcaatgcctcgccggcagggatgctttccgaactttgcaacaggggcgtatgccagcccgagcctgcctcggcgtaatgccagcgcttgaGCt                                                                                                                                                    <  7:104973‑M1/3‑1 (MQ=255)  gcaggtgcaggCCTTCACCCGCAACGATGTCCGCGGTTTTGCCAACGAAGACAGCGCCGCGGTGCTGCTGCAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTg                                                                                                                                                   >  6:329303/1‑149 (MQ=255)  atcagcggcgcctgttcaccccgggcaacacgcacaaaatgctgcaattgcagggtcaatgcctcgccggcagggatgctttccgaactttgcaacaggggcgtatgccagcccgagcctgcctcggcgtaatgccagcgcttgaGCTg                                                                                                                                                   >  8:338016‑M1/146‑149 (MQ=255)   caggtgcaggCCTTCACCCGCAACGATGTCCGCGGTTTTGCCAACGAAGACAGCGCCGCGGTGCTGCTGCAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTg                                                                                                                                                   <  5:231935/148‑1 (MQ=255)       tgcaggCCTTCACCCGCAACGATGTCCGCGGTTTTGCCAACGAAGACAGCGCCGCGGTGCTGCTGCAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGaa                                                                                                                                              <  5:332129/149‑1 (MQ=255)         caggCCTTCACCCGCAACGATGTCCGCGGTTTTGCCAACGAAGACAGCGCCGCGGTGCTGCTGCAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGTGAGCTGGACGCTGGCGaaa                                                                                                                                             <  5:172095/148‑1 (MQ=255)         caggCCTTCACCCGCAACGATGTCCGCGGTTTTGCCAACGAAGACAGCGCCGCGGTGCTGCTGCAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGaaa                                                                                                                                             <  6:286354/148‑1 (MQ=255)         caggCCTTCACCCGCAACGATGTCCGCGGTTTTGCCAACGAAGACAGCGCCGCGGTGCTGCTGCAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAg                                                                                                                                            >  3:358316/1‑149 (MQ=255)          aggCCTTCACCCGCAACGATGTCCGCGGTTTTGCCAACGAAGACAGCGCCGCGGTGCTGCTGCAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGc                                                                                                                                           >  3:34014/1‑149 (MQ=255)           ggCCTTCACCCGCAACGATGTCCGCGGTTTTGCCAACGAAGACAGCGCCGCGGTGCTGCTGCAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGcc                                                                                                                                          <  4:34014/149‑1 (MQ=255)            gCCTTCACCCGCAACGATGTCCGCGGTTTTGCCAACGAAGACAGCGCCGCGGTGCTGCTGCAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGccc                                                                                                                                         >  2:216268/1‑149 (MQ=255)              cTTCACCCGCAACGATGTCCGCGGTTTTGCCAACGAAGACAGCGCCGCGGTGCTGCTGCAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCg                                                                                                                                       >  8:227448/1‑149 (MQ=255)                  aCCCGCAACGATGTCCGCGGTTTTGCCAACGAAGACAGCGCCGCGGTGCGGCTGCAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTa                                                                                                                                   >  3:140026/1‑149 (MQ=255)                    ccccgggcaacacgcacaaaatgctgcaattgcagggtcaatgcctcgccggcagggatgctttccgaactttgcaacaggggcgtatgccagcccgagcctgcctcggcgtaatgccagcgcttgag                                                                                                                                                      >  1:308675‑M1/128‑128 (MQ=255)                    ccccgggcaacacgcacaaaatgctgcaattgcagggtcaatgcctcgccggcagggatgctttccgaactttgcaacaggggcgtatgccagcccgagcctgcctcggcgtaatgccagcgcttgag                                                                                                                                                      <  2:308675‑M1/1‑1 (MQ=255)                     cGCAACGATGTCCGCGGTTTTGCCAACGAAGACAGCGCCGCGGTGCTGCTGCAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTAccc                                                                                                                                >  3:213671/1‑149 (MQ=255)                               tCCGCGGTTTTGCCAACGAAGACAGCGCCGCGGTGCTGCTGCAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGa                                                                                                                       <  6:328198/148‑1 (MQ=255)                                 cgcgGTTTTGCCAACGAAGACAGCGCCGCGGTGCTGCTGCAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGaaa                                                                                                                                             >  6:221243/1‑124 (MQ=255)                                 cgcgGTTTTGCCAACGAAGACAGCGCCGCGGTGCTGCTGCAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGaaa                                                                                                                                             <  5:221243/124‑1 (MQ=255)                                 cgcgGTTTTGCCAACGAAGACAGCGCCGCGGTGCTGCTGCAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATgg                                                                                                                    >  7:256687/1‑149 (MQ=255)                                          gCCAACGAAGACAGCGCCGCGGTGCTGCTGCAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGt                                                                                                            <  5:329303/148‑1 (MQ=255)                                            cAACGAAGACAGCGCCGCGGTGCTGCTGCAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGc                                                                                                          >  2:213966/1‑148 (MQ=255)                                              caattgcagggtcaatgcctcgccggcagggatgctttccgaacattgcaacaggggcgtatgccagcccgagcctgcctcggcgtaatgccagcgcttgaGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCCTGCTa                                                                                                        <  6:244983‑M1/47‑1 (MQ=255)                                                      aGCGCCGCGGTGCTGCTGCAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGc                                                                                               <  1:216268/149‑1 (MQ=255)                                                          ccgcGGTGCTGCTGCAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCgg                                                                                            >  1:248058/1‑148 (MQ=255)                                                          ccgcGGTGCTGCTGCAGTTAGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCgg                                                                                            >  3:356099/1‑148 (MQ=255)                                                           cgcgGTGCTGCTGCAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTa                                                                                          <  4:358316/149‑1 (MQ=255)                                                           cgcgGTGCTGCTGCAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTa                                                                                          <  1:22740/149‑1 (MQ=255)                                                            gcgGTGCTGCTGCAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTAc                                                                                         <  2:321832/149‑1 (MQ=255)                                                            atgcctcgccggcagggatgctttccgaactttgcaacaggggcgaatgccagcccgagcctgcctcggcgtaatgccagcgcttgaGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTAc                                                                                         <  1:266857‑M1/62‑1 (MQ=255)                                                              ggTGCTGCTGCAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTAccc                                                                                       <  7:227448/149‑1 (MQ=255)                                                                  ctgctgcAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAg                                                                                    <  4:213671/148‑1 (MQ=255)                                                                       gcAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCAc                                                                              >  3:259533/1‑149 (MQ=255)                                                                        cAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACt                                                                             >  3:218032/1‑149 (MQ=255)                                                                          gTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGa                                                                           <  5:41015/149‑1 (MQ=255)                                                                           ttCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAg                                                                          <  2:121694/149‑1 (MQ=255)                                                                              gCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTAccc                                                                                       <  3:63803/133‑1 (MQ=255)                                                                              gCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTAccc                                                                                       >  4:63803/1‑133 (MQ=255)                                                                              gCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCa                                                                        <  4:362907/148‑1 (MQ=255)                                                                               ccAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCgcgc                                                                                                                            >  8:108911/1‑95 (MQ=255)                                                                               ccAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCgcgc                                                                                                                            <  7:108911/95‑1 (MQ=255)                                                                               ccAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCAtt                                                                      >  3:250187/1‑149 (MQ=255)                                                                                 aaCGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTcc                                                                    >  1:275803/1‑149 (MQ=255)                                                                                   cGGTGCCCTGGGCAGCCTGACCGGGGCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTcccc                                                                  <  4:140026/149‑1 (MQ=255)                                                                                            tgcaacaggggcgtatgccagcccgagcctgcctcggcgtaatgccagcgcttgaGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTCCCCAGCTCaa                                                           >  2:266857‑M1/56‑147 (MQ=255)                                                                                             gcaacaggggcgtatgccagcccgagcctgcctcggcgtaatgccagcgcttgaGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATGTGCTGGCCGGTACCCAAGGTGCACTGAGCATTCCCCAGCTCAAgc                                                         >  5:244983‑M1/55‑148 (MQ=255)                                                                                              gCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTCCCCAGCTCAAgcgc                                                       <  4:250187/149‑1 (MQ=255)                                                                                                    tGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTCCCCAGCTCAAGCGCTGGCAt                                                 >  6:320676/1‑149 (MQ=255)                                                                                                          ggTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTCCCCAGCTCAAGCGCTGGCATTACGcc                                           >  4:269811/1‑149 (MQ=255)                                                                                                            tCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTCCCCAGCTCAAGCGCTGGCATTACGCCGa                                         <  3:269811/149‑1 (MQ=255)                                                                                                               gACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTCCCCAGCTCAAGCGCTGGCATTACGCCGagg                                       >  4:138229/1‑148 (MQ=255)                                                                                                                aCGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTCCCCAGCTCAAGCGCTGGCATTACGCCGagg                                       >  7:327219/1‑147 (MQ=255)                                                                                                                aCGCGGTGGCTGCACCGTCGAGCTGGGAGCTGCACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTCCCCAGCTCAAGCGCTGCCATTACGCCGaggca                                     >  2:342190/1‑149 (MQ=255)                                                                                                                      tGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTCCCCAGCTCAAGCGCTGGCATTACGCCGAGGCAGGCTCg                               >  4:199998/1‑149 (MQ=255)                                                                                                                        gCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTCCCCAGCTCAAGCGCTGGCATTACg                                             <  1:55540/133‑1 (MQ=255)                                                                                                                        gCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTCCCCAGCTCAAGCGCTGGCATTACg                                             >  2:55540/1‑133 (MQ=255)                                                                                                                          tGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTCCCCAGCTCAAGCGCTg                                                     >  4:118639/1‑123 (MQ=255)                                                                                                                          tGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTCCCCAGCTCAAGCGCTg                                                     <  3:118639/123‑1 (MQ=255)                                                                                                                              ccGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTCCCCAGCTCAAGCGCTGGCATTACGCCGAGGCAGGCTCGGGCTGGCa                       <  2:275803/149‑1 (MQ=255)                                                                                                                                gTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTCCCCAGCTCAAGCGCTGGCATTACGCCGAGGCAGGCTCGGGCTGGCATa                     >  7:28365/1‑149 (MQ=255)                                                                                                                                         ggagctggACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTCCCCAGCTCAAGCGCTGGCATTACGCCGAGGCAGGCTCGGGCTGGCATACGc                  >  4:131343/1‑143 (MQ=255)                                                                                                                                         ggagctggACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTCCCCAGCTCAAGCGCTGGCATTACGCCGAGGCAGGCTCGGGCTGGCATACGc                  <  3:131343/143‑1 (MQ=255)                                                                                                                                         ggagctggACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTCCCCAGCTCAAGCGCTGGCATTACGCCGAGGCAGGCTCGGGCTGGCATACGCCCCt              <  4:185655/147‑1 (MQ=255)                                                                                                                                         ggagctggACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTCCCCAGCTCAAGCGCTGGCATTACGCCGAGGCAGGCTCGGGCTGGCATACGCCCCt              <  2:248058/147‑1 (MQ=255)                                                                                                                                         ggagctggACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTCCCCAGCTCAAGCGCTGGCATTACGCCGAGGCAGGCTCGGGCTGGCATACGCCCCt              >  3:185655/1‑147 (MQ=255)                                                                                                                                           agctggACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTCCCCAGCTCAAGCGCTGGCATTACGCCGAGGCAGGCTCGGGCTGGCATACGCCCCTGTTg          <  8:256687/149‑1 (MQ=255)                                                                                                                                            gctggACGCTGGCGAAAGCCGCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGGACTGAGCATTCCCCAGCTCAAGCGCTGGCATTACGCCGAGGCAGGCTCGGGCTGGCATACGCCCCTGTTGc         <  4:218032/149‑1 (MQ=255)                                                                                                                                              tggACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCAc                                                                              >  4:200972/1‑78 (MQ=255)                                                                                                                                              tcgACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCAc                                                                              <  3:200972/76‑1 (MQ=255)                                                                                                                                               ggACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTCCCCAGCTCAAGCGCTGGCATTACGCCGAGGCAGGCTCGGGCTGGCATACGCCCCTGTTGCaaa      <  1:213966/149‑1 (MQ=255)                                                                                                                                               ggACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTCCCCAGCTCAAGCGCTGGCATTACGCCGAGGCAGGCTCGGGCTGGCATACGCCCCTGTTGCa        >  1:173175/1‑147 (MQ=255)                                                                                                                                                   GCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTCCCCAGCTCAAGCGCTGGCATTACGCCGAGGCAGGCTCGGGCTGGCATACGCCCCTGTTGCAAAGTTc  <  8:181193‑M1/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                     TGCAGGTGCAGGCCTTCACCCGCAACGATGTCCGCGGTTTTGCCAACGAAGACAGCGCCGCGGTGCTGCTGCAGTTCGCCAACGGTGCCCTGGGCAGCCTGACCGGGTCTGACGCGGTGGCTGCACCGTGGAGCTGGGAGCTGGACGCTGGCGAAAGCCCCGTGTACCCGCGCCAGGATGGCCAGCCGTGCTATCTGCTGGCCGGTACCCAAGGTGCACTGAGCATTCCCCAGCTCAAGCGCTGGCATTACGCCGAGGCAGGCTCGGGCTGGCATACGCCCCTGTTGCAAAGTTC  >  NC_002947/2975560‑2975854

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.