New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3209806	48 (0.810)	4 (0.070)	4/234	NT	8.9%	intergenic (+67/+50)	PP_2813/PP_2814	BNR domain‑containing protein/hypothetical protein
	?	NC_002947	= 3209831	38 (0.700)					intergenic (+92/+25)	PP_2813/PP_2814	BNR domain‑containing protein/hypothetical protein

CACTGACGGCGGCGTTGTTCAACGCCGAAGGTGTACCTGTATTGTTTTCACGCCGAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGCCAGGGCTGCCATTGGGGTATTGGGAGCGGAAACCGAGGATCTT  >  NC_002947/3209660‑3209948                                                                                                                                                    |                                                                                                                                                cACTGACGGCGGCGTTGTTCAACGCCGAAGGTGTACCTGTATTGTTTTCACGCCGAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCg                                                                                                                                                <  3:337010/148‑1 (MQ=255)  aCTGACGGCGGCGTTGTTCAACGCCGAAGGTGTACCTGTATTGTTTTCACGCCGAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGaa                                                                                                                                              >  1:290688/1‑149 (MQ=255)   cTGACGGCGGCGTTGTTCAACGCCGAAGGTGTACCTGTATTGTTTTCACGCCGAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAAt                                                                                                                                             <  6:85287/149‑1 (MQ=255)     gACGGCGGCGTTGTTCAACGCCGAAGGTGTACCTGTATTGTTTTCACGCCGAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATgg                                                                                                                                           >  1:230160/1‑149 (MQ=255)        ttcggcgTTGAACAACGCCGAAGGTGTACCTGTATTGTTTTCACGCCGAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGCTGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGggtg                                                                                                                                        >  8:140206/3‑149 (MQ=255)        ttcggcgTTGAACAACGCCGAAGGTGTACCTGTATTGTTTTCACGCCGAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGggtg                                                                                                                                        >  4:319023/3‑149 (MQ=255)           ggcgTTGTTCAACGCCGAAGGTGTACCTGTATTGTTTTCACGCCGAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTc                                                                                                                                     >  8:6356/1‑149 (MQ=255)            gcgTTGTTCAACGCCGAAGGTGTACCTGTATTGTTTTCACGCCGAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGGATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCg                                                                                                                                    <  3:358878/149‑1 (MQ=255)              gttgttCAACGCCGAAGGTGTACCTGTATTGTTTTCACGCCGAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTg                                                                                                                                  <  8:9317/149‑1 (MQ=255)              gttgttCAACGCCGAAGGTGTACCTGTATTGTTTTCACGCCGAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTg                                                                                                                                  <  2:290688/149‑1 (MQ=255)                 gttCAACGCCGAAGGTGTACCTGTATTGTTTTCACGCCGAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGACCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGc                                                                                                                                <  2:286708/148‑1 (MQ=255)                  ttCAACGCCGAAGGTGTACCTGTATTGTTTTCACGCCGAGGGGTAATGCACTACCAGGAGTGAAGGGTTGGCCACGCGCTCAGAAGCCAGGCATCGCAATACGATGCCTGGCCTTTTTTC‑TTGCCTGGTCGAATGGGTGGTCGTgtc                                                                                                                                >  8:333530/1‑145 (MQ=255)                     aaCGCCGAAGGTGTACCTGTATTGTTTTCACGCCGAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCtt                                                                                                                           >  8:127450/1‑149 (MQ=255)                     aaCGCCGAAGGTGTACCTGTATTGTTTTCACGCCGAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCtt                                                                                                                           >  4:142410/1‑149 (MQ=255)                                  tACCTGTATTGTTTTCACGCCGAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGgcccaggcaa                                                                                                              >  7:127450‑M2/1‑139 (MQ=255)                                      tGTATTGTTTTCACGCCGAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGgccca                                                                                                                   >  1:347137‑M2/1‑135 (MQ=255)                                      tGTATTGTTTTCACGCCGAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGgccca                                                                                                                   <  2:347137‑M2/140‑6 (MQ=255)                                       gTATTGTTTTCACGCCGAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCaa                                                                                                        >  2:359739/1‑149 (MQ=255)                                                tCACGCCGAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACg                                                                                               >  3:235802/1‑149 (MQ=255)                                                  aCGCCGAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGggtg                                                                                                                                        >  2:274334/1‑107 (MQ=255)                                                  aCGCCGAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGggtg                                                                                                                                        <  1:274334/107‑1 (MQ=255)                                                  aCGCCGAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGc                                                                                              <  7:6356/148‑1 (MQ=255)                                                   cGCCGAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTa                                                                                            <  3:274430/149‑1 (MQ=255)                                                   cGCAGAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGGACACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGc                                                                                              >  1:137544/1‑147 (MQ=255)                                                    gCCGAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGc                                                                                              >  8:349765/1‑146 (MQ=255)                                                     ccGAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTaga                                                                                          <  3:142410/149‑1 (MQ=255)                                                       gAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTAGAGc                                                                                        <  6:259879/149‑1 (MQ=255)                                                            gTAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAGATCAACGCTGGACGCTAGAGCTGaa                                                                                    <  7:55154/149‑1 (MQ=255)                                                             tAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCctgaaggtgccacgaccacccattcgcccaggcaa                                                                                                              >  7:327410‑M1/1‑87 (MQ=255)                                                             tAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCctgaaggtgccacgaccacccattcgcccaggcaa                                                                                                              <  8:327410‑M1/122‑36 (MQ=255)                                                                      aCCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCctgaaggtgccacgaccacccattcgcccaggca                                                                                                               <  4:376871‑M1/112‑35 (MQ=255)                                                                      aCCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCctgaaggtgccacgaccacccattcgcccaggca                                                                                                               >  3:376871‑M1/1‑78 (MQ=255)                                                                       ccAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCa                                                                        <  2:326727/149‑1 (MQ=255)                                                                       ccAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCa                                                                        <  4:235802/149‑1 (MQ=255)                                                                           gAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTa                                                                                            >  4:139455/1‑125 (MQ=255)                                                                           gAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTa                                                                                            <  3:139455/125‑1 (MQ=255)                                                                                    gTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGtt                                                           <  1:359739/149‑1 (MQ=255)                                                                                     ttGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTa                                                          >  6:97211/1‑149 (MQ=255)                                                                                         ccACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGtt                                                      >  3:374655/1‑149 (MQ=255)                                                                                          cACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGACACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGt                                                                     >  8:147221/1‑133 (MQ=255)                                                                                          cACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGACACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGt                                                                     <  7:147221/133‑1 (MQ=255)                                                                                             tCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGcc                                                   >  4:290172/1‑148 (MQ=255)                                                                                             tCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGcc                                                   >  8:267818/1‑148 (MQ=255)                                                                                               gCTCAGTAGCCAGGCATCTCAAAGCTATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCATGCCGAGGCAAG‑TCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCaaa                                                <  1:233133/149‑1 (MQ=255)                                                                                                 tCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCATGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAgg                                              >  1:186012/1‑149 (MQ=255)                                                                                                           ggCATCGCAAACCGATGCCTGGCCTGTTTTCTTTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTa                                                                                            >  1:50289/1‑94 (MQ=255)                                                                                                              aTCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGCCAGGGCTGCCAt                                 >  7:351763/1‑149 (MQ=255)                                                                                                                 gCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCATGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGCCAGGGCTGCCATTg                               <  2:186012/148‑1 (MQ=255)                                                                                                                  cAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGCCAGGGCTGCCATTggg                             <  2:230160/149‑1 (MQ=255)                                                                                                                       cGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGCCAGGGCTGCCATTGGGGTAtt                        >  8:252016/1‑149 (MQ=255)                                                                                                                        gATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGCCAGGGCTGCCATTGGGGTATTg                       <  7:349765/149‑1 (MQ=255)                                                                                                                         aTGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGCCAGGGCTGCCATTGGGGTATTgg                      <  3:319023/149‑1 (MQ=255)                                                                                                                                gcctgTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGTCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGCCAGGGCTGCCATTGGGGTATTGGGAGCGGa               <  2:137544/149‑1 (MQ=255)                                                                                                                                     ttttC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGCCAGGGCTGCCATTGGGGTATTGGGAGCGGAAAc            <  8:355459/147‑1 (MQ=255)                                                                                                                                        tC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGCCAGGGCTGCCATTGGGGTATTGGGAGCGGAAACCGAg        >  8:266341/1‑148 (MQ=255)                                                                                                                                           ttGCCTGGGCctgaaggtgccacgaccacccattcgcccaggcaagaaaacaggccaggcatcggtttgcgatgcctggcttctgagcgagtggccaacccttcactcctggtagggcattacccctcggcgtgaaaacaatacaggta      >  7:127450‑M1/1‑10 (MQ=255)                                                                                                                                           ttGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGgcccaggcaagaaaacaggccaggcatcggtttgcgatgcctggcttctgagcgagtggccaacccttcactcctggtagggcatta                                 >  7:327410‑M2/1‑35 (MQ=255)                                                                                                                                           ttGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGgcccaggcaagaaaacaggccaggcatcggtttgcgatgcctggcttctgagcgagtggccaacccttcactcctggtagggcatta                                 <  8:327410‑M2/122‑88 (MQ=255)                                                                                                                                            tGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGgcccaggcaagaaaacaggccaggcatcggtttgcgatgcctggcttctgagcgagtggccaacccttcactcctggt                                          >  3:376871‑M2/1‑34 (MQ=255)                                                                                                                                            tGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGgcccaggcaagaaaacaggccaggcatcggtttgcgatgcctggcttctgagcgagtggccaacccttcactcctggt                                          <  4:376871‑M2/112‑79 (MQ=255)                                                                                                                                             gCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGcc                                            >  2:14946/1‑108 (MQ=255)                                                                                                                                             gCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGcc                                            <  1:14946/108‑1 (MQ=255)                                                                                                                                              ccTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGCCAGGGCTGCCATTGGGGTATTGGGAGCGGAAACCGAGGAtctt  <  7:140206/149‑1 (MQ=255)                                                                                                                                                tGGGCctgaaggtgccacgaccacccattcgcccaggcaagaaaacaggccaggcatcggtttgcgatgcctggcttctgagcgagtggccaacccttcactcctggtagggcattacccctcggcgtgaaaacaataca          >  1:347137‑M1/1‑5 (MQ=255)                                                                                                                                                tGGGCctgaaggtgccacgaccacccattcgcccaggcaagaaaacaggccaggcatcggtttgcgatgcctggcttctgagcgagtggccaacccttcactcctggtagggcattacccctcggcgtgaaaacaataca          <  2:347137‑M1/140‑136 (MQ=255)                                                                                                                                                    |                                                                                                                                                CACTGACGGCGGCGTTGTTCAACGCCGAAGGTGTACCTGTATTGTTTTCACGCCGAGGGGTAATGCCCTACCAGGAGTGAAGGGTTGGCCACTCGCTCAGAAGCCAGGCATCGCAAACCGATGCCTGGCCTGTTTTC‑TTGCCTGGGCGAATGGGTGGTCGTGGCACCTTCAGGCCCAGGCAAG‑TCAACGCTGGACGCTAGAGCTGAAGGTAATCCGCCAGGTCTGCGTAGTTATGTTGCCAAAGGCCAGGGCTGCCATTGGGGTATTGGGAGCGGAAACCGAGGATCTT  >  NC_002947/3209660‑3209948

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.