BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4433959	79 (1.340)	4 (0.070)	4/238	NT	5.0%	intergenic (+107/‑56)	PP_3928/PP_3929	hypothetical protein/hypothetical protein
*	?	NC_002947	= 4433985	77 (1.400)	4 (0.070)	4/238	NT	5.0%	intergenic (+133/‑30)	PP_3928/PP_3929	hypothetical protein/hypothetical protein

Only 100 of 110 total aligned reads displayed.

ACCAATGGCGTGGTGCTGGCGATTCAACCAGCATCCTGATTCGACACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAATCGATCGGTCCCAGTCTTAAAAGGTGCCCCGTAAACCTATGCGGATCAAGGACCTATATCGTGCTCACGC  >  NC_002947/4433814‑4434105

aCCAATGGCGTGGTGCTGGCGATTCAACCAGCATCCTGATTCGACACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCcaca                                                                                                                                                   <  6:214285/148‑1 (MQ=255)

  cAATGGCGTGGTGCTGGCGATTCAACCAGCATCCTGATTCGACACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGcc                                                                                                                                                >  8:246636/1‑149 (MQ=255)

          tggtgCTGGCGATTCAACCAGCATCCTGATTCGACACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCttt                                                                                                                                        <  5:246907/149‑1 (MQ=255)

          tggtgCTGGCGATTCAACCAGCATCCTGATTCGACACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCttt                                                                                                                                        >  6:230636/1‑149 (MQ=255)

            gtgCTGGCGATTCAACCAGCATCCTGATTCGACACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCa                                                                                                                                      <  1:374258/149‑1 (MQ=255)

                 ggCGATTCAACCAGCATCCTGATTCGACACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAgacgg                                                                                                                                 >  2:249088/1‑149 (MQ=255)

                  gCGATTCAACCAGCATCCTGATTCGACACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAgacgga                                                                                                                                >  3:68704/1‑149 (MQ=255)

                      ttCAACCAGCATCCTGATTCGACACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTAGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGcc                                                                                                                            <  5:152153/149‑1 (MQ=255)

                       tCAACCATCATCCTGATTCGACACGCCCCGGCCAAGGCGAACCATTGCACAGCACTTCGCCGCCGGTCAAGCATGGGCAGAACGTGTTGATACGTTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGcc                                                                                                                            <  8:236575/148‑1 (MQ=255)

                         aaCCAGCATCCTGATTCGATACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTtg                                                                                                                         <  2:205420‑M2/149‑3 (MQ=255)

                         aaCCAGCATCCTGATTCGACACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTtg                                                                                                                         <  4:176994‑M2/149‑3 (MQ=255)

                          aCCAGCATCCTGATTCGACACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTtgg                                                                                                                        <  1:207641‑M2/149‑4 (MQ=255)

                           ccAGCATCCTGATTCGACACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTtggc                                                                                                                       >  1:249088‑M2/1‑145 (MQ=255)

                            cAGCATCCTGATTCGACACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTtggcg                                                                                                                      <  3:59763‑M2/149‑6 (MQ=255)

                            cAGCATCCTGATTCGACACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTtggcg                                                                                                                      <  3:44496‑M2/149‑6 (MQ=255)

                            cAGCATCCTGATTCGACACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTtggcg                                                                                                                      <  2:233496‑M2/149‑6 (MQ=255)

                             aGCATCCTGATTCGACACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCAaggcgtccgtctgaaagaacgggctgtggcgc                                                                                                                     <  5:378152‑M1/149‑33 (MQ=255)

                                   cTGATTCGACACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCAaggcgtccgtctgaaagaacgggctgtggcgctgaccg                                                                                                               <  7:198668‑M1/149‑39 (MQ=255)

                                       ttCGACACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACtt                                                                                                            >  4:201338/1‑148 (MQ=255)

                                        tCGACACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTg                                                                                                           >  8:1312/1‑148 (MQ=255)

                                          gACACGCCCCGGCCAAGTCGACCGATTGCACAGCACTTCGCCGCGGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCGACAGCCCGTTCTTTCATACGGACGCCTtggcgc                                                                                                                     >  7:266261‑M2/1‑130 (MQ=255)

                                          gACACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGCAACGATCAATGCCGGTCAGCGCCACAGCACGTTCTTTCAGACGGACGCCTTGGCGCTCATCACTTGAAg                                                                                                        >  6:63916/1‑149 (MQ=255)

                                          gACACGACCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGACAAGCATGGACAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTaggcgc                                                                                                                     <  8:266261‑M2/136‑7 (MQ=255)

                                           acacGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCAc                                                                                                              >  4:49673/1‑142 (MQ=255)

                                           acacGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCAc                                                                                                              <  3:49673/142‑1 (MQ=255)

                                             acGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGaa                                                                                                         <  8:141765/145‑1 (MQ=255)

                                             acGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGaa                                                                                                         >  7:141765/1‑145 (MQ=255)

                                             acGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGaa                                                                                                         >  5:86069/1‑145 (MQ=255)

                                             acGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGaa                                                                                                         <  6:86069/145‑1 (MQ=255)

                                               gCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCAaggcgtccgtctgaaagaacgggctgtggcgctgac                                                                                                                 <  7:316394‑M1/135‑37 (MQ=255)

                                               gCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCAaggcgtccgtctgaaagaacgggctgtggcgctgac                                                                                                                 >  8:316394‑M1/1‑99 (MQ=255)

                                                 cccGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAAtt                                                                                                 >  4:55673/1‑149 (MQ=255)

                                                 cccGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAAtt                                                                                                 >  5:359779/1‑149 (MQ=255)

                                                  ccGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAAttt                                                                                                >  3:321702/1‑149 (MQ=255)

                                                  ccGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAAttt                                                                                                >  7:164442/1‑149 (MQ=255)

                                                   cGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAAtttt                                                                                               >  5:94303/1‑149 (MQ=255)

                                                     gCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAAtttttt                                                                                             <  6:359779/149‑1 (MQ=255)

                                                      ccAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAAttttttt                                                                                            <  6:94303/149‑1 (MQ=255)

                                                         aGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTgcc                                                                                         <  3:55673/149‑1 (MQ=255)

                                                           gCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTgcccg                                                                                       >  2:322005/1‑149 (MQ=255)

                                                             gACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTgcccgcc                                                                                     <  4:321702/149‑1 (MQ=255)

                                                              aCCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTgcccgccc                                                                                    >  2:100544/1‑149 (MQ=255)

                                                                  aTTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑Ga                                                                               <  4:44496/149‑1 (MQ=255)

                                                                      cacaGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAAc                                                                            >  4:290654/1‑148 (MQ=255)

                                                                      cacaGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAAc                                                                            <  1:233496/148‑1 (MQ=255)

                                                                       acaGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGCCGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAAcc                                                                           >  8:267807/1‑148 (MQ=255)

                                                                       acaGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAAcc                                                                           >  1:133122/1‑148 (MQ=255)

                                                                       acaGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAAcc                                                                           >  6:187750/1‑148 (MQ=255)

                                                                         aGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCaaa                                                                        >  3:143180/1‑149 (MQ=255)

                                                                           cACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGAt                                                                                                                 <  5:390519/107‑1 (MQ=255)

                                                                           cACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAatc                                                                      <  4:59763/149‑1 (MQ=255)

                                                                             cTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAatcga                                                                    <  1:322005/149‑1 (MQ=255)

                                                                              ttCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAatcgat                                                                   <  3:201338/149‑1 (MQ=255)

                                                                                cgccgcCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAatcgat                                                                   <  2:207641/147‑1 (MQ=255)

                                                                                 gccgccGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAatcgat                                                                   <  7:325756/146‑1 (MQ=255)

                                                                                 gccgccGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAatcgat                                                                   >  8:325756/1‑146 (MQ=255)

                                                                                  ccgccgGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAATCGATCGGt                                                               <  1:100544/149‑1 (MQ=255)

                                                                                  ccgccgGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAATCGATCGGt                                                               <  7:267807/149‑1 (MQ=255)

                                                                                    gccgGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAatcgatcg                                                                 <  1:177254/145‑1 (MQ=255)

                                                                                    gccgGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAatcgatcg                                                                 >  2:177254/1‑145 (MQ=255)

                                                                                     ccgGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTgc                                                                                          >  8:228369/1‑120 (MQ=255)

                                                                                          cAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAATCGATCGGTCCCAGTCt                                                       >  6:240455/1‑149 (MQ=255)

                                                                                           aaGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAATCGATCGGTCCCa                                                           >  4:215932/1‑144 (MQ=255)

                                                                                           aaGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAATCGATCGGTCCCa                                                           <  3:215932/144‑1 (MQ=255)

                                                                                           aaGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAATCGATCGGTCCCAGTCt                                                       >  1:302434/1‑148 (MQ=255)

                                                                                             gCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCTGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAATCGATCGGTccc                                                            >  5:267102/1‑141 (MQ=255)

                                                                                             gCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAATCGATCGGTccc                                                            <  6:267102/141‑1 (MQ=255)

                                                                                             gCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAATCGATCGGTCCCAGTCTTaa                                                    <  5:347099/149‑1 (MQ=255)

                                                                                              cATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAATCGATCGGTCCCAGTCTTaaa                                                   <  2:133122/149‑1 (MQ=255)

                                                                                                   ccAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCTCAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAAtttttt                                                                                             >  4:9429/1‑103 (MQ=255)

                                                                                                   ccAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCTCAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAAtttttt                                                                                             <  3:9429/103‑1 (MQ=255)

                                                                                                    cAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAATCGATCGGTCCCAGTCTTAAAAGGTGc                                             <  5:240455/149‑1 (MQ=255)

                                                                                                     aGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAatcgat                                                                   >  8:239159/1‑126 (MQ=255)

                                                                                                     aGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAatcgat                                                                   <  7:239159/126‑1 (MQ=255)

                                                                                                       aaCGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAATCGATCGGTCCCAGTCTTAAAAGGTGcccc                                          >  7:359123/1‑149 (MQ=255)

                                                                                                          gtgtTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTTAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAATCGATCGGTGCCAGTAGTAAAAGGTGCCACGt                                        >  7:150280/1‑148 (MQ=255)

                                                                                                             ttGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGGCGAAACCAAATCGATCGGTCCCAGTCTTAAAAGGTGCCCCGTaaa                                     <  1:79109/149‑1 (MQ=255)

                                                                                                             ttGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAATCGATCGGTCCCAGTCTTAAAAGGTGCCCCGTAAAc                                    <  3:290654/149‑1 (MQ=255)

                                                                                                              tGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAATCGATCGGTCCCAGTCTTAAAAGGTGCCCCGTAAAc                                    <  1:205420/148‑1 (MQ=255)

                                                                                                                    gCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAATCGATCGGTCCCAGTCTTAAAAGGTGCCCCGTAAACCTATGCg                             <  5:187750/149‑1 (MQ=255)

                                                                                                                    gCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAATCGATCGGTCCCAGTCTTAAAAGGTGCCCCGTAAACCTATGCg                             >  2:36083/1‑149 (MQ=255)

                                                                                                                      ttGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAATCGATCGGTCCCAGTCtt                                                      >  2:257889/1‑122 (MQ=255)

                                                                                                                         gAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAATCGATCGGTCCCAGTCTTAAAAGGTGCCCCGTAAACCTATGCGGATc                         >  2:250276/1‑148 (MQ=255)

                                                                                                                          aaCGATCAATGCCGCTCAGAGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAATCGATCTGTCCCAGTATAAAAAGGTGAACAGAAAACCTATGCGGaga                         >  6:310060/1‑145 (MQ=255)

                                                                                                                            cGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAATCGATCGGTCCCAGTCTTAAAAGGTGCCCCGTAAACCTATGCGGATCAAgg                     <  4:143180/149‑1 (MQ=255)

                                                                                                                               tCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAATCGATCGGTCGCAGTCTTAAAAGGTGCCCCGTAAACCTATGCGGATCAAGGAcc                  >  1:250742/1‑149 (MQ=255)

                                                                                                                                     ccGGTCAGCGCCACAGCCCGATCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCCG‑GAAACCAAATCGATCGGTCCCAGTATTAAAAGGTGCACCGTAAAACTATGAGGATCAAGCACCTATATc            >  8:144119/1‑149 (MQ=255)

                                                                                                                                      cGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTtggcgctgaccggcattgatcgttccaagcgtatcaacacgttctggccatgcttggccggcggcgaagtgctgtgcaatgggtcgccttggccggggcgtgtcgaatcag            <  7:198668‑M2/149‑112 (MQ=255)

                                                                                                                                        gTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTtggcgctgaccggcattgatcgttccaagcgtatcaacacgttctggccatgcttggccggcggcgaagtgctgtgcaatgggtcgccttggccggggc                        <  7:316394‑M2/135‑100 (MQ=255)

                                                                                                                                        gTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTtggcgctgaccggcattgatcgttccaagcgtatcaacacgttctggccatgcttggccggcggcgaagtgctgtgcaatgggtcgccttggccggggc                        >  8:316394‑M2/1‑36 (MQ=255)

                                                                                                                                         tCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAATCGATCGGTCCCAGTCTTAAAAGGTGCCCCGTAAACCTATGCGGATCAAGGACCTATATCGTGc        <  5:230636/149‑1 (MQ=255)

                                                                                                                                            gcgcCTaggcgtccgtctgaaagaacgggctgtggcgctgaccggcattgatcgttccaagcgtatcaacacgttctgtccatgcttgtccggcggcgaagtgctgtgcaatgggtcgccttggccgggtcgtgtc                   <  8:266261‑M1/136‑131 (MQ=255)

                                                                                                                                            gcgcCAaggcgtccgtatgaaagaacgggctgtcgcgctgaccggcattgatcgttccaagcgtatcaacacgttctggccatgcttggcccgcggcgaagtgctgtgcaatcggtcgacttggccggggcgtgtc                   >  7:266261‑M1/1‑6 (MQ=255)

                                                                                                                                             cgcCAaggcgtccgtctgaaagaacgggctgtggcgctgaccggcattgatcgttccaagcgtatcaacacgttctggccatgcttggccggcggcgaagtgctgtgcaatgggtcgccttggccggggcgtgtcgaatcaggatgctg     <  3:44496‑M1/149‑145 (MQ=255)

                                                                                                                                             cgcCAaggcgtccgtctgaaagaacgggctgtggcgctgaccggcattgatcgttccaagcgtatcaacacgttctggccatgcttggccggcggcgaagtgctgtgcaatgggtcgccttggccggggcgtgtcgaatcaggatgctg     <  3:59763‑M1/149‑145 (MQ=255)

                                                                                                                                              gcCAaggcgtccgtctgaaagaacgggctgtggcgctgaccggcattgatcgttccaagcgtatcaacacgttctggccatgcttggccggcggcgaagtgctgtgcaatgggtcgccttggccggggcgtgtcgaatcaggatgctgg    >  1:249088‑M1/1‑4 (MQ=255)

                                                                                                                                               ccAaggcgtccgtctgaaagaacgggctgtggcgctgaccggcattgatcgttccaagcgtatcaacacgttctggccatgcttggccggcggcgaagtgctgtgcaatgggtcgccttggccggggcgtgtcgaatcaggatgctggt   <  1:207641‑M1/149‑147 (MQ=255)

                                                                                                                                               ccAaggcgtccgtctgaaagaacgggctgtggcgctgaccggcattgatcgttccaagcgtatcaacacgttctggccatgcttggccggcggcgaagtgctgtgcaatgggtcgccttggccggggcgtgtcgaatcaggatgctggt   >  7:246636‑M1/1‑3 (MQ=255)

                                                                                                                                               ccACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAATCGATCGGTCCCAGTCTTAAAAGGTGCCCCGTAAACCTATGCGGATCAAGGACCTATATCGTGCTCAcgc  <  4:68704/149‑1 (MQ=255)

                                                                                                                                                cAaggcgtccgtctgaaagaacgggctgtggcgctgaccggcattgatcgttccaagcgtatcaacacgttctggccatgcttggccggcggcgaagtgctgtgcaatgggtcgccttggccggggcgtatcgaatcaggatgctggtt  <  2:205420‑M1/149‑148 (MQ=255)

ACCAATGGCGTGGTGCTGGCGATTCAACCAGCATCCTGATTCGACACGCCCCGGCCAAGGCGACCCATTGCACAGCACTTCGCCGCCGGCCAAGCATGGCCAGAACGTGTTGATACGCTTGGAACGATCAATGCCGGTCAGCGCCACAGCCCGTTCTTTCAGACGGACGCCTTGGCGCTGATCACTTGAAGCATAATTTTTTTGCCCGCCCGG‑GAAACCAAATCGATCGGTCCCAGTCTTAAAAGGTGCCCCGTAAACCTATGCGGATCAAGGACCTATATCGTGCTCACGC  >  NC_002947/4433814‑4434105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.