New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5164442	60 (1.020)	4 (0.070)	4/246	NT	6.6%	coding (3438/3906 nt)	hrpA	ATP‑dependent helicase HrpA
	?	NC_002947	= 5164477	55 (0.970)					coding (3403/3906 nt)	hrpA	ATP‑dependent helicase HrpA

CACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTACAG  >  NC_002947/5164298‑5164588                                                                                                                                                  |                                                                                                                                                     cacCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAg                                                                                                                                                   <  3:67304/148‑1 (MQ=255)  acCAGGTTGCCTAGCTGCTGCTTGGTGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCCCGGCATGCTCGGCCCAGCt                                                                                                                                                 <  3:345686/149‑1 (MQ=255)          gCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCt                                                                                                                                         >  3:371143/1‑149 (MQ=255)            cTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCtgg                                                                                                                                       >  2:287726/1‑147 (MQ=255)            cTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTg                                                                                                                                       >  6:299032/1‑149 (MQ=255)            cTAGCTGATGAATGATGTCGTTCACTGACACCCCTTGGCTCAGGTCGATCTTGCACTTGAAGCGTTTCTGCAGACCATGCCTCAGCTTCAGCACTACCAGGGT‑CTGCCTTGCCAGCCCCTCGGAATGCTCGGCCCAGCTGCCGCTCtt                                                                                                                                        >  8:311580/1‑148 (MQ=255)                 tgctgctTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGtt                                                                                                                                   >  5:140707/1‑148 (MQ=255)                          aTGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAgcgc                                                                                                                         <  4:296572/149‑1 (MQ=255)                             tCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGc                                                                                                                      <  2:137042/149‑1 (MQ=255)                               gTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGc‑‑c                                                                                                                   <  7:326562/148‑1 (MQ=255)                               gTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGc‑‑c                                                                                                                   >  2:62596/1‑148 (MQ=255)                                ttCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑Caa                                                                                                                 <  7:311580/149‑1 (MQ=255)                                   aGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCttggccgcgctggctgaacgcaagcgcggcagctgggc                                                                                                                <  5:169451‑M1/149‑39 (MQ=255)                                         aCCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCcagctgccgcgctggctgaacgcaagcgcggcagctgggccgag                                                                                                          <  1:287726‑M1/149‑45 (MQ=255)                                         aCCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCAcc                                                                                                        >  4:138146/1‑149 (MQ=255)                                          ccGCTTGGCTCAGGTCCATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCttggccgcgctggctgaacgcaagcgcggcagctgggccgagcat                                                                                                         <  3:12542‑M1/149‑46 (MQ=255)                                             cTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCa                                                                                                    <  6:153085/149‑1 (MQ=255)                                                   tCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTc                                                                                                     <  5:55649/142‑1 (MQ=255)                                                   tCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTc                                                                                                     >  6:55649/1‑142 (MQ=255)                                                   tCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTgg                                                                                               >  1:231698/1‑148 (MQ=255)                                                     aGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCaa                                                                                            <  2:231698/149‑1 (MQ=255)                                                       gTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACg                                                                                          >  4:227793/1‑149 (MQ=255)                                                                gCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGgtt                                                                                       <  1:62596/143‑1 (MQ=255)                                                                gCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTc                                                                                   <  5:299032/147‑1 (MQ=255)                                                                gCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTc                                                                                   <  3:102352/147‑1 (MQ=255)                                                                 cccTTGAAGCGCTTCTCCAGCCCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCCCGGCATGCTCGGCCttggccgcgctggctgaacgcaagcgcggcagctgggccgagcatgccgagcgcctggcaaggcaga                                                                                   <  6:164908‑M1/148‑68 (MQ=255)                                                                  ccTTGAAGCGTTGCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGG‑CTGCCTTGCCAGGCGCGCGGCATGCGCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCt                                                                               <  7:112212/149‑1 (MQ=255)                                                                   cTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGcgcg                                                                                                                        >  6:250883/1‑109 (MQ=255)                                                                   cTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGcgcg                                                                                                                        <  5:250883/109‑1 (MQ=255)                                                                   cTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGcgcg                                                                                                                        >  4:115465/1‑109 (MQ=255)                                                                   cTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGcgcg                                                                                                                        <  3:115465/109‑1 (MQ=255)                                                                       aaGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCaa                                                                           <  1:336295/148‑1 (MQ=255)                                                                              tCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCa                                                                    <  3:227793/148‑1 (MQ=255)                                                                                 gCAGACCATGCCACAGCTTCAGCACTTCCAGGGTGCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGc                                                                                                           >  1:51624/1‑107 (MQ=255)                                                                                 gCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGc                                                                                                           <  2:51624/106‑1 (MQ=255)                                                                                  cAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGt                                                               >  6:172207/1‑149 (MQ=255)                                                                                           ccACAGGTTCAGCACTTACTGGGT‑CTGCCTTGCGAGTCGCTCTGCATGCTCGGACGAGCTTCCGCGCTTGCGTTCAGCCAGCGCGGG‑‑CAAGGCCGCACCTTCAAGTGGCATCGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTgg                                                      <  4:229812/149‑1 (MQ=255)                                                                                            cacaGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTc                                                              >  4:303538/1‑140 (MQ=255)                                                                                            cacaGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTc                                                              <  3:303538/140‑1 (MQ=255)                                                                                             acaGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTg                                                       >  3:332058/1‑146 (MQ=255)                                                                                             acaGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTg                                                       <  4:332058/146‑1 (MQ=255)                                                                                             acaGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGc                                                     >  6:276251/1‑148 (MQ=255)                                                                                             acaGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGc                                                     >  7:13113/1‑148 (MQ=255)                                                                                               aGCTTCAGCACTTCCAGGGT‑CTGACTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCcag                                                  <  7:188883/149‑1 (MQ=255)                                                                                                 cTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCcagca                                                <  8:13113/149‑1 (MQ=255)                                                                                                     aGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGaa                                             <  3:138146/148‑1 (MQ=255)                                                                                                      gCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATg                                           >  3:40501/1‑149 (MQ=255)                                                                                                          ttCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGAt                                                                       <  5:307114/117‑1 (MQ=255)                                                                                                          ttCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGAt                                                                       >  6:307114/1‑117 (MQ=255)                                                                                                          ttCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGt                                                               <  5:21966/125‑1 (MQ=255)                                                                                                          ttCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGt                                                               >  6:21966/1‑125 (MQ=255)                                                                                                              aGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGAc                                   <  5:276251/149‑1 (MQ=255)                                                                                                              aGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGAc                                   <  5:172207/149‑1 (MQ=255)                                                                                                                  t‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAggccgagcatgccgggcgcctggcaaggcagaccctggaagtgctgaagctgtggcatgggctggagaagcgcttcaaggg                                <  6:164908‑M2/148‑82 (MQ=255)                                                                                                                  t‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGATCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAgc                               >  1:308982/1‑149 (MQ=255)                                                                                                                      gCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCt                            >  3:220989/1‑149 (MQ=255)                                                                                                                       ccTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAgcgc                             <  6:140707/147‑1 (MQ=255)                                                                                                                        cTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTc                          >  5:174750/1‑149 (MQ=255)                                                                                                                        cTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTc                          >  4:349351/1‑149 (MQ=255)                                                                                                                           gCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTAc                       >  6:332473/1‑149 (MQ=255)                                                                                                                            ccAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACGTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGGCGAATGTCTTCGACGAGCGCtgagacc                      >  8:289832/1‑143 (MQ=255)                                                                                                                              aGGCGCTCGGCATGCTCGGCCCAGCTTCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCg                    >  5:96204/1‑149 (MQ=255)                                                                                                                               ggCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGc                   <  3:349351/149‑1 (MQ=255)                                                                                                                                        cATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCa          >  4:12880/1‑149 (MQ=255)                                                                                                                                         aTGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAggccgagcatgccgagcgcctggcaaggcagaccctggaagtgctgaagctgtggcatggtctgcagaaacgcttcaagggcaagatggacctgagccaagcgg         <  3:12542‑M2/149‑105 (MQ=255)                                                                                                                                            cTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCAGCTGggccgagcatgccgagcgcctggcaaggcagaccctggaagtgctgaagctgtggcatggtctgcagaaacgcttcaagggcaagatcgacctgagccaagcggt        <  1:287726‑M2/149‑106 (MQ=255)                                                                                                                                            cTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACgg       >  4:92717/1‑148 (MQ=255)                                                                                                                                             tCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTAccc                     <  4:71346/133‑1 (MQ=255)                                                                                                                                             tCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTAccc                     >  3:71346/1‑133 (MQ=255)                                                                                                                                                gCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAggccgagcatgccgagcgcctggcaaggcagaccctggaagtgctgaagctgtggcatggtctgcagaaacgcttcaagggcaagatcgacctgagccaagcggtggcact  <  5:169451‑M2/149‑112 (MQ=255)                                                                                                                                                gCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTAcag  <  6:174750/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                     CACCAGGTTGCCTAGCTGCTGCTTGATGTCGTTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTACAG  >  NC_002947/5164298‑5164588

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.