New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5164442	60 (1.020)	4 (0.070)	4/246	NT	6.6%	coding (3438/3906 nt)	hrpA	ATP‑dependent helicase HrpA
	?	NC_002947	= 5164477	55 (0.970)					coding (3403/3906 nt)	hrpA	ATP‑dependent helicase HrpA

TTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTACAGCAGGCCCAGCTCGGTCAGCCCCGGCAGCTTGCCGCG  >  NC_002947/5164329‑5164624                                                                                                                                                        |                                                                                                                                                    ttCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑Caa                                                                                                                                                     <  7:311580/149‑1 (MQ=255)          aCCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCAcc                                                                                                                                            >  4:138146/1‑149 (MQ=255)              cTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCa                                                                                                                                        <  6:153085/149‑1 (MQ=255)                    tCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTc                                                                                                                                         <  5:55649/142‑1 (MQ=255)                    tCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTc                                                                                                                                         >  6:55649/1‑142 (MQ=255)                    tCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTgg                                                                                                                                   >  1:231698/1‑148 (MQ=255)                      aGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCaa                                                                                                                                <  2:231698/149‑1 (MQ=255)                        gTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACg                                                                                                                              >  4:227793/1‑149 (MQ=255)                                 gCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGgtt                                                                                                                           <  1:62596/143‑1 (MQ=255)                                 gCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTc                                                                                                                       <  5:299032/147‑1 (MQ=255)                                 gCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTc                                                                                                                       <  3:102352/147‑1 (MQ=255)                                   ccTTGAAGCGTTGCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGG‑CTGCCTTGCCAGGCGCGCGGCATGCGCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCt                                                                                                                   <  7:112212/149‑1 (MQ=255)                                        aaGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCaa                                                                                                               <  1:336295/148‑1 (MQ=255)                                               tCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCa                                                                                                        <  3:227793/148‑1 (MQ=255)                                                  gCAGACCATGCCACAGCTTCAGCACTTCCAGGGTGCTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGc                                                                                                                                               >  1:51624/1‑107 (MQ=255)                                                  gCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGc                                                                                                                                               <  2:51624/106‑1 (MQ=255)                                                   cAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGt                                                                                                   >  6:172207/1‑149 (MQ=255)                                                            ccACAGGTTCAGCACTTACTGGGT‑CTGCCTTGCGAGTCGCTCTGCATGCTCGGACGAGCTTCCGCGCTTGCGTTCAGCCAGCGCGGG‑‑CAAGGCCGCACCTTCAAGTGGCATCGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTgg                                                                                          <  4:229812/149‑1 (MQ=255)                                                             cacaGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTc                                                                                                  <  3:303538/140‑1 (MQ=255)                                                             cacaGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTc                                                                                                  >  4:303538/1‑140 (MQ=255)                                                              acaGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTg                                                                                           <  4:332058/146‑1 (MQ=255)                                                              acaGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTg                                                                                           >  3:332058/1‑146 (MQ=255)                                                              acaGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGc                                                                                         >  6:276251/1‑148 (MQ=255)                                                              acaGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGc                                                                                         >  7:13113/1‑148 (MQ=255)                                                                aGCTTCAGCACTTCCAGGGT‑CTGACTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCcag                                                                                      <  7:188883/149‑1 (MQ=255)                                                                  cTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCcagca                                                                                    <  8:13113/149‑1 (MQ=255)                                                                      aGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGaa                                                                                 <  3:138146/148‑1 (MQ=255)                                                                       gCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATg                                                                               >  3:40501/1‑149 (MQ=255)                                                                           ttCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGAt                                                                                                           <  5:307114/117‑1 (MQ=255)                                                                           ttCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGAt                                                                                                           >  6:307114/1‑117 (MQ=255)                                                                           ttCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGt                                                                                                   <  5:21966/125‑1 (MQ=255)                                                                           ttCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGt                                                                                                   >  6:21966/1‑125 (MQ=255)                                                                               aGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGAc                                                                       <  5:172207/149‑1 (MQ=255)                                                                               aGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGAc                                                                       <  5:276251/149‑1 (MQ=255)                                                                                   t‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAggccgagcatgccgggcgcctggcaaggcagaccctggaagtgctgaagctgtggcatgggctggagaagcgcttcaaggg                                                                    <  6:164908‑M2/148‑82 (MQ=255)                                                                                   t‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGATCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAgc                                                                   >  1:308982/1‑149 (MQ=255)                                                                                       gCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCt                                                                >  3:220989/1‑149 (MQ=255)                                                                                        ccTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAgcgc                                                                 <  6:140707/147‑1 (MQ=255)                                                                                         cTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTc                                                              >  5:174750/1‑149 (MQ=255)                                                                                         cTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTc                                                              >  4:349351/1‑149 (MQ=255)                                                                                            gCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTAc                                                           >  6:332473/1‑149 (MQ=255)                                                                                             ccAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACGTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGGCGAATGTCTTCGACGAGCGCtgagacc                                                          >  8:289832/1‑143 (MQ=255)                                                                                               aGGCGCTCGGCATGCTCGGCCCAGCTTCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCg                                                        >  5:96204/1‑149 (MQ=255)                                                                                                ggCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGc                                                       <  3:349351/149‑1 (MQ=255)                                                                                                         cATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCa                                              >  4:12880/1‑149 (MQ=255)                                                                                                          aTGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAggccgagcatgccgagcgcctggcaaggcagaccctggaagtgctgaagctgtggcatggtctgcagaaacgcttcaagggcaagatggacctgagccaagcgg                                             <  3:12542‑M2/149‑105 (MQ=255)                                                                                                             cTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGCAGCTGggccgagcatgccgagcgcctggcaaggcagaccctggaagtgctgaagctgtggcatggtctgcagaaacgcttcaagggcaagatcgacctgagccaagcggt                                            <  1:287726‑M2/149‑106 (MQ=255)                                                                                                             cTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACgg                                           >  4:92717/1‑148 (MQ=255)                                                                                                              tCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTAccc                                                         >  3:71346/1‑133 (MQ=255)                                                                                                              tCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTAccc                                                         <  4:71346/133‑1 (MQ=255)                                                                                                                 gCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAggccgagcatgccgagcgcctggcaaggcagaccctggaagtgctgaagctgtggcatggtctgcagaaacgcttcaagggcaagatcgacctgagccaagcggtggcact                                      <  5:169451‑M2/149‑112 (MQ=255)                                                                                                                 gCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTAcag                                      <  6:174750/149‑1 (MQ=255)                                                                                                                          ccGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTACAGCAGGccc                               <  4:371143/147‑1 (MQ=255)                                                                                                                           cgcgCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTACAGCAGGCCCAg                             >  7:349848/1‑148 (MQ=255)                                                                                                                                ttGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAAt                                                                                >  6:303774/1‑92 (MQ=255)                                                                                                                                ttGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAAt                                                                                <  5:303774/92‑1 (MQ=255)                                                                                                                                    gTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTcc                                                                                                 >  7:35934/1‑71 (MQ=255)                                                                                                                                    gTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTcc                                                                                                 <  8:35934/71‑1 (MQ=255)                                                                                                                                     ttCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTa                                                            <  6:223198/107‑1 (MQ=255)                                                                                                                                        agccagcGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCAGTTTCACGGTACAGCAGGCCCAGCTCGGTCAGCCCCg               >  2:340886/1‑149 (MQ=255)                                                                                                                                          aaggtgcgGC‑‑CTTGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCAt                                                  <  7:248414/107‑1 (MQ=255)                                                                                                                                          aaggtgcgGC‑‑CTTGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCAt                                                  >  8:248414/6‑112 (MQ=255)                                                                                                                                            agcGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCTCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTACAGCAGGCCCAGCTCGGTCAGCCCCGGCat           <  2:308982/149‑2 (MQ=255)                                                                                                                                                   c‑‑cAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTACAGCAGGCCCAGCTCGGTCAGCCCCGGCAGCTTGCcg    >  7:298675/1‑149 (MQ=255)                                                                                                                                                       aaGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTACAGCAGGCCCAGCTCGGTCAGc                   <  4:311015/132‑1 (MQ=255)                                                                                                                                                       aaGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTACAGCAGGCCCAGCTCGGTCAGc                   >  3:311015/1‑132 (MQ=255)                                                                                                                                                       aaGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTACAGCAGGCCCAGCTCGGTCAGCCCCGGCAGCTTGCcgcg  >  2:35568/1‑149 (MQ=255)                                                                                                                                                        |                                                                                                                                                    TTCAGTGCCACCGCTTGGCTCAGGTCGATCTTGCCCTTGAAGCGTTTCTGCAGACCATGCCACAGCTTCAGCACTTCCAGGGT‑CTGCCTTGCCAGGCGCTCGGCATGCTCGGCCCAGCTGCCGCGCTTGCGTTCAGCCAGCGCGGC‑‑CAAGGCCGCACCTTCACGTGGCAACGGTTGTTCGCCTTCAAGGATGCAACTGTCCAGGCTGGCCAGCAGAATGTCTTCGACCAGCGCTTCTACCCGCCCCATTTCACGGTACAGCAGGCCCAGCTCGGTCAGCCCCGGCAGCTTGCCGCG  >  NC_002947/5164329‑5164624

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.