New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5632333 =62 (1.050)4 (0.070) 4/244 NT 6.7% coding (1863/3954 nt) putA proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
?NC_002947 5632376 = 52 (0.920)coding (1906/3954 nt) putA proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase

ATTTCCATCCAGGAACTGGTCGCCGACCCGGTGGCCAGCATCGAGCGCATGGGTACCCAGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCGCTGCTGGCCTGCGCCGCCAGCGAGAGCGCTGCCGCACCGGTGCTGAACCCGGCTGACCACCGCGAC  >  NC_002947/5632187‑5632477
                                                                                                                                                    |                                                                                                                                                 
aTTTCCATCCAGGAACTGGTCGCCGACCCGGTGGCCAGCATCGAGCGCATGGGTACCCAGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACAt                                                                                                                                                 <  3:297104/149‑1 (MQ=255)
  ttgtcaacgtcggcaacggtggcctcctgcacatggccgacgacgtcgcggtggtcagccgggttcagcaccggtgcggcagcgctctcgctggcggcgcaggccagcagcggggcagccttccagtcgttgtgagcggtggccagCAt                                                                                                                                                 <  8:52670‑M1/3‑1 (MQ=255)
    gtcaacgtcggcaacggtggcctcctgcacatggccgacgacgtcgcggtggtcagccgggttcagcaccggtgctgcagcgctctcgctggcggcgcaggccagcagcggggcagccttccagtcgttgtgagcggtggccagCATg                                                                                                                                                >  8:29168‑M1/145‑148 (MQ=255)
     catccaGGAACTGGTCGCCGACCCGGTGGCCAGCATCGAGCGCATGGGTACCCAGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGcc                                                                                                                                             >  2:298897/1‑148 (MQ=255)
      atccaGGAACTGGTCGCCGACCCGGTGGCCAGCATCGAGCGCATGGGTACCCAGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCaa                                                                                                                                           >  7:105678/1‑149 (MQ=255)
      atccaGGAACTGGTCGCCGACCCGGTGGCCAGCATCGAGCGCATGGGTACCCAGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCaa                                                                                                                                           >  5:10554/1‑149 (MQ=255)
       tccaGGAACTGGTCGCCGACCCGGTGGCCAGCATCGAGCGCATGGGTACCCAGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAAt                                                                                                                                          <  4:248756/149‑1 (MQ=255)
                     gCCGACCCGGTGGCCAGCATCGAGCGCATGGGTACCCAGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGc                                                                                                                            <  3:207996/149‑1 (MQ=255)
                        gACCCGGTGGCCAGCATCGAGCGCATGGGTACCCAGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTc                                                                                                                         >  5:386749/1‑149 (MQ=255)
                           ccGGTGGCCAGCATCGAGCGCATGGGTACCCAGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCt                                                                                                                      <  8:282962/149‑1 (MQ=255)
                           ccGGTGGCCAGCATCGAGCGCATGGGTACCCAGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCt                                                                                                                      <  6:117754/149‑1 (MQ=255)
                             ggTGGCCAGCATCGAGCGCATGGGTACCCAGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGt                                                                                                                    <  6:10554/149‑1 (MQ=255)
                              ggggCCAGCATCGAGCGCATGGGTACCCAGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCTAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTc                                                                                                                   <  8:138972/147‑1 (MQ=255)
                               cacatggccgacgacgtcgcggtggtcagccgggttcagcaccggtgcggcagcgctctcgctggcggcgcaggccagcagcggggcagccttccagtcgttgtgagcggtggccagCATGGCGCAGGACACCGCCTGGCGTCGCTGTc                                                                                                                   >  5:1190‑M1/118‑149 (MQ=255)
                                ggCCAGCATCGAGCGCATGGGTACCCAGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCt                                                                                                                 <  2:371746/149‑1 (MQ=255)
                                  ccAGCATCGAGCGCATGGGTACCCAGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCt                                                                                                                      >  6:47737/1‑142 (MQ=255)
                                  ccAGCATCGAGCGCATGGGTACCCAGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCt                                                                                                                      <  5:47737/142‑1 (MQ=255)
                                  ccAGCATCGAGCGCATGGGTACCCAGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTgc                                                                                                               <  8:353361/149‑1 (MQ=255)
                                    aGCATCGAGCGCATGGGTACCCAGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAACTCGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTgc                                                                                                               <  1:298897/149‑1 (MQ=255)
                                     gCATCGAGCGCATGGGTACCCAGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTgcgc                                                                                                             >  6:58692/1‑148 (MQ=255)
                                          gAGCGCATGGGTACCGAGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATg                                                                                                         <  1:134690/147‑1 (MQ=255)
                                           aGCGCATGGGTACCCAGGAAGGCAGTATCGGCCTGCCGCACGCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTg                                                                                                      <  6:248536/149‑1 (MQ=255)
                                           aGCGCATGGGTACCCAGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTg                                                                                                      <  6:254112/149‑1 (MQ=255)
                                           aGCGCATGGGTACCCAGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTg                                                                                                      <  3:93686/149‑1 (MQ=255)
                                             cgtcgcggtggtcagccgggttcagcaccggtgcggcagcgctctcgctggcggcgcaggccagcagcggggcagccttccaggcgttgtgagcggtggccagCATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTg                                                                                                      >  6:112990‑M1/104‑149 (MQ=255)
                                                    gTACCCAGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTgg                                                                                                     >  3:300142/1‑141 (MQ=255)
                                                    gTACCCAGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTgg                                                                                                     <  4:300142/141‑1 (MQ=255)
                                                     tggtcagccgggttcagcaccggtgcggcagcgctctcgctggcggcgcaggccagcagcggggcagccttccagtcgttgtgagcggtggccagCATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCt                                                                                                       <  4:343455‑M1/45‑1 (MQ=255)
                                                     tggtcagccgggttcagcaccggtgcggcagcgctctcgctggcggcgcaggccagcagcggggcagccttccagtcgttgtgagcggtggccagCATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCt                                                                                                       >  3:343455‑M1/96‑140 (MQ=255)
                                                       cccAGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTc                                                                                            >  1:298009/1‑147 (MQ=255)
                                                       cccAGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTc                                                                                            <  2:298009/147‑1 (MQ=255)
                                                        ccAGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTcac                                                                                          >  2:354690/1‑148 (MQ=255)
                                                          aGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAAc                                                                                      <  1:24830/149‑1 (MQ=255)
                                                                  aGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGaa                                                                              <  3:141537/149‑1 (MQ=255)
                                                                   gTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTAGGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAg                                                                             <  6:386749/149‑1 (MQ=255)
                                                                     aTCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGc                                                                           >  7:206319/1‑149 (MQ=255)
                                                                        ggCCTGCCGCACCCAAGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGCAAGGCTGc                                                                        >  7:306105/1‑149 (MQ=255)
                                                                         gCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGcc                                                                       >  8:324961/1‑149 (MQ=255)
                                                                         gCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGcc                                                                       <  8:27176/149‑1 (MQ=255)
                                                                              ccGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCgct                                                                  >  3:188006/1‑149 (MQ=255)
                                                                              ccGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCgct                                                                  >  3:182169/1‑149 (MQ=255)
                                                                                  aCCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCGctgctg                                                              <  8:206319/149‑1 (MQ=255)
                                                                                    ccACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGTCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCGCTGCTGGc                                                            <  5:58692/149‑1 (MQ=255)
                                                                                     cACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCGCTGCTGGcc                                                           <  4:188006/149‑1 (MQ=255)
                                                                                     cACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCGCTGCTGGcc                                                           <  4:182169/149‑1 (MQ=255)
                                                                                          aatCCCCTGCCGCGCGACCTGGATGGCACCGCA‑‑CGGGCCAACTCGGCCGGCATCGCCATTGCCAATGAACCCCGCCTGGCGTCGCGGTCCTGCGCCATGCTGGCCACCGCTCACACACGACTGGAAGGCTGCCCCGctgctg                                                              <  1:198474/140‑1 (MQ=255)
                                                                                          aTTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCGctgctg                                                              >  2:198474/1‑141 (MQ=255)
                                                                                          aTTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCGCTGCTGGCCTgcgc                                                      >  3:167491/1‑149 (MQ=255)
                                                                                              cccTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTTGAAGGCTGCCCCGCTGCTGGCCTGcgccgc                                                   <  8:105678/148‑1 (MQ=255)
                                                                                              cccTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCGCTGCTGGCCTGcgccgc                                                   >  4:115167/1‑148 (MQ=255)
                                                                                                 tGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCGCTGCTGGCCTGCGCCGCCAGc                                               >  8:203634/1‑149 (MQ=255)
                                                                                                            cTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCGCTGCTGGCCTGCGCCGCCAGCGAGAGCGCTGc                                    <  3:115167/149‑1 (MQ=255)
                                                                                                              gTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCGCTGCTGGCCTGCGCCGCCAGCGAGAGCGCTGCCg                                  >  4:103991/1‑149 (MQ=255)
                                                                                                                 tGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTca                                                                                           <  1:199882/90‑1 (MQ=255)
                                                                                                                 tGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTca                                                                                           >  2:199882/1‑90 (MQ=255)
                                                                                                                        gAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCGCTGCTGGCCTGCGCCGCCAGCGAGAGCGCTGCCGCACCGGTGCt                        >  8:332444/1‑149 (MQ=255)
                                                                                                                             cGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCGCTGCTGGCCTGCGCCGCCAGCGAGAGCGCTGCCGCACCGGTGCTGaa                     <  1:354690/149‑1 (MQ=255)
                                                                                                                              gggCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCGCTGCTGGCCTGCGCCGCCAGCGAGAGCGCTGCCGCACCGGt                           >  5:352780/1‑142 (MQ=255)
                                                                                                                              gggCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCGCTGCTGGCCTGCGCCGCCAGCGAGAGCGCTGCCGCACCGGt                           <  6:352780/142‑1 (MQ=255)
                                                                                                                              gggCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCGCTGCTGGCCTGCGCCGCCAGCGAGAGCGCTGCCGCACCGGTGCTGAAc                    <  7:203634/149‑1 (MQ=255)
                                                                                                                               ggCCAACTCGGCCGGCATCGACATGTCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCGCTGCTGGCCTGCGCCGCCAGCGAGAGCGCTGCCGCACCGGTGCTGAAcc                   <  8:349223/149‑1 (MQ=255)
                                                                                                                                 ccAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCGCTGCTGGCCTGCGCCGCCAGCGAGAGCGCTGCCGCACCGGTGCTGACCCCg                 >  4:265810/1‑149 (MQ=255)
                                                                                                                                  cAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCGCTGCTGGCCTGCGCCGCCAGCGAGAGCGCTGCCGCACCGGTGCTGAACCCgg                <  7:332444/149‑1 (MQ=255)
                                                                                                                                  cAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCGCTGCTGGCCTGCGCCGCCAGCGAGAGCGCTGCCGCACCGGTGCTGAACCCgg                >  6:54666/1‑149 (MQ=255)
                                                                                                                                   aaCTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCGCTGCTGGCCTGCGCCGCCAGCGAGAGCGCTGCCGCACCGGTGCTGAACCCgga               >  2:122382/1‑148 (MQ=255)
                                                                                                                                     cTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCGCTGCTGGCCTGCGCCGCCAGCGAGAGCGCTGCCGCACCGGTGCTGAACCCGGCt              >  6:88001/1‑148 (MQ=255)
                                                                                                                                            ggcATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCGCTGCTGGCCTGCGCCGCCAGCGAGAGCGCTGCCGCACCGGTGCTGAACCCGGCTGACCACcg      >  7:336036/1‑149 (MQ=255)
                                                                                                                                             gcATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCGCTGCTGGCCTGCGCCGCCAGCGAGAGCGCTg                                     >  7:242541/1‑117 (MQ=255)
                                                                                                                                             gcATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCGCTGCTGGCCTGCGCCGCCAGCGAGAGCGCTg                                     <  8:242541/117‑1 (MQ=255)
                                                                                                                                                tCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCGCTGCTGGCCTGCGCCGCCAGCGAGAGCGCTGCCGCACCGGTGCTGAACCCGGCTGACCACCGCGAc  <  3:103991/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
ATTTCCATCCAGGAACTGGTCGCCGACCCGGTGGCCAGCATCGAGCGCATGGGTACCCAGGAAGGCAGTATCGGCCTGCCGCACCCACGCATTCCCCTGCCGCGCGACCTGTATGGCACCGAA‑‑CGGGCCAACTCGGCCGGCATCGACATGGCCAATGAACACCGCCTGGCGTCGCTGTCCTGCGCCATGCTGGCCACCGCTCACAACGACTGGAAGGCTGCCCCGCTGCTGGCCTGCGCCGCCAGCGAGAGCGCTGCCGCACCGGTGCTGAACCCGGCTGACCACCGCGAC  >  NC_002947/5632187‑5632477

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.