New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5699460	56 (0.950)	5 (0.090)	5/240	NT	9.0%	intergenic (+206/‑63)	PP_5002/phaA	hypothetical protein/poly(3‑hydroxyalkanoate) polymerase
	?	NC_002947	= 5699488	48 (0.870)					intergenic (+234/‑35)	PP_5002/phaA	hypothetical protein/poly(3‑hydroxyalkanoate) polymerase

ACAGCCCAGTGAAGGGCTGTCTTGCGCATTACACGAAAGTCGGGTAACCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACACCCTGGGGCTGAACCCGGTCATCGGCATCCGCCGCA  >  NC_002947/5699315‑5699607                                                                                                                                                  |                                                                                                                                                     aCAGCCCAGTGAAGGGCTGTCTTGCGCATTACACGAAAGTCGGGTAACCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCt                                                                                                                                                   >  1:46127/1‑149 (MQ=255)  cAGCCCAGTGAAGGGCTGTCTTGCGCATTACACGAAAGTCGGGTAACCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTc                                                                                                                                                  <  8:117026/149‑1 (MQ=255)   aGCCCAGTGAAGGGCTGTCTTGCGCATTACACGAAAGTCGTGTAACCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCa                                                                                                                                                 <  4:286655/149‑1 (MQ=255)     cccAGTGAAGGGCTGTCTTGCGCATTACACGAAAGTCGGGTAACCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAgg                                                                                                                                               >  1:188079/1‑149 (MQ=255)     cccAGTGAAGGGCTGTCTTGCGCATTACACGAAAGTCGGGTAACCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAgg                                                                                                                                               <  1:190452/149‑1 (MQ=255)     cccAGTGAAGGGCTGTCTTGCGCATTACACGAAAGTCGGGTAACCAATGGGTGTGGCAAGTTCCCTGCATGACATTTCAGGTGCGCAAAACCCACCCAACACCGCGGTTACATATCAATGGTAACCCGAGTAACACAACCGGGCTCAgg                                                                                                                                               >  1:117103/1‑149 (MQ=255)      ccAGTGAAGGGCTGTCTTGCGCATTACACGAAAGTCGGGTAACCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAggg                                                                                                                                              <  3:128684/149‑1 (MQ=255)            aaGGGCTGTCTTGCGCATTACACGAAAGTCGGGTAACCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGc                                                                                                                                        <  5:173433/149‑1 (MQ=255)                 cTGTCTTGCGCATTACACGAAAGTCGGGTAACCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCg                                                                                                                                   >  4:242098/1‑149 (MQ=255)                    tCTTGCGCATTACACGAAAGTCGGGTAACCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGcc                                                                                                                                 <  7:210837/148‑1 (MQ=255)                      ttGCGCATTACACGAAAGTCGGGTAACCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCca                                                                                                                                >  8:335976/1‑147 (MQ=255)                      ttGCGCATTACACGAAAGTCGGGTAACCAATGGGTGTGGCAAGTTCCCCGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCca                                                                                                                                >  3:133832/1‑147 (MQ=255)                        gcgcATTACACGAAAGTCGGGTAACCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAg                                                                                                                             >  6:368046/1‑148 (MQ=255)                        gcgcATTACACGAAAGTCGGGTAACCAATGGGTGTGGCAAGTTCCCCGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCcaca                                                                                                                              <  4:133832/147‑1 (MQ=255)                           cATTACACGAAAGTCGGGTAACCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAAc                                                                                                                         >  2:188079‑M2/1‑148 (MQ=255)                                  cGAAAGTCGGGTAACCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGttgctgtggcgggtgcacagccctgagcccggtact                                                                                                                  <  2:99893‑M1/149‑37 (MQ=255)                                  cGAAAGTCGGGTAACCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAAccggtact                                                                                                                  <  8:182862‑M2/149‑9 (MQ=255)                                   gaaccgcgggtaaCCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGttgctgtggcgggtgcacagccctgagcccggtactg                                                                                                                 <  8:317854‑M1/143‑38 (MQ=255)                                   gAAAGTCGGGTAACCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCAccc                                                                                                                                    <  2:74193/130‑1 (MQ=255)                                   gAAAGTCGGGTAACCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTc                                                                                                                 >  2:360066/1‑149 (MQ=255)                                   gAAAGTCGGGTAACCAATGGGTGTGGCAAGTTCCCTGCATGACATTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCAccc                                                                                                                                    >  1:74193/1‑130 (MQ=255)                                       gTCGGGTAACCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCCCCCGAGTAGCAGTACCGGttgctgtggcgggtgcacagccctgagcccggtactgctac                                                                                                             <  1:107764‑M1/149‑42 (MQ=255)                                          gggTAACCAATGTGTGTGGAAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCa                                                                                                           <  2:117103/148‑1 (MQ=255)                                           ggTAACCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACAGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAgg                                                                                                         <  5:200485/149‑1 (MQ=255)                                               aCCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACCCAGCACCCCTGTTCCTTATAACTGGACACCCGACTAGCACTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGAACTCGTCTCAGGACaa                                                                                                     >  3:43932/1‑149 (MQ=255)                                                ccAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAAccggtac                                                                                                                   <  7:239172‑M2/134‑8 (MQ=255)                                                ccAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAAccggtac                                                                                                                   >  8:239172‑M2/1‑127 (MQ=255)                                                ccAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAAc                                                                                                    <  7:335976/149‑1 (MQ=255)                                                 cAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGttgctgtggcgggtgcacagccctgagcccggtactgct                                                                                                               >  2:293011‑M1/1‑98 (MQ=255)                                                 cAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGttgctgtggcgggtgcacagccctgagcccggtactgct                                                                                                               <  1:293011‑M1/137‑40 (MQ=255)                                                 cAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACg                                                                                                   >  1:180358/1‑149 (MQ=255)                                                       gtgtGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGcgt                                                                                             <  2:180358/149‑1 (MQ=255)                                                       gtgtGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCACGACAACGGAGcgt                                                                                             >  4:321261/1‑149 (MQ=255)                                                        tgtgGCAAGTTCGCTGCATGAGTTTGCAGGTCGGCAGAACCCAGGCAGCAGGGCTGTTCCTTATGAGTGGTCTCCCGAGTAGCAGTACCTGGGTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGcgtc                                                                                            <  4:43932/149‑1 (MQ=255)                                                         gtgGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCt                                                                                                                                            >  1:36496/1‑100 (MQ=255)                                                         gtgGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCt                                                                                                                                            <  2:36496/100‑1 (MQ=255)                                                          tgGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGACACAGCAACCGTAACTCGTCTCAGGACAACGGAGcgtcg                                                                                           >  4:218545/1‑148 (MQ=255)                                                            gCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCGCGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGcgtcg                                                                                           >  1:190709/1‑146 (MQ=255)                                                            gCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGc                                                                                                                                        >  6:139723/1‑101 (MQ=255)                                                            gCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCcaca                                                                                                                              >  6:138835/1‑111 (MQ=255)                                                            gCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCcaca                                                                                                                              <  5:138835/111‑1 (MQ=255)                                                            gCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTa                                                                                         <  3:108838/148‑1 (MQ=255)                                                              aaGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑At                                                                                     <  2:75983/149‑1 (MQ=255)                                                                gTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑At                                                                                     >  2:51236/1‑147 (MQ=255)                                                                gTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGa                                                                                   <  3:242098/149‑1 (MQ=255)                                                                       gCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAAc                                                                              >  3:161717/1‑147 (MQ=255)                                                                       gCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAAc                                                                              >  4:225098/1‑147 (MQ=255)                                                                        cATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAAc                                                                              >  2:289439/1‑146 (MQ=255)                                                                           gACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCAGCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAg                                                                                                          >  4:25536/1‑116 (MQ=255)                                                                           gACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCAGCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAg                                                                                                          <  3:25536/116‑1 (MQ=255)                                                                             cTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGcgtcgt                                                                                          <  3:332012/130‑1 (MQ=255)                                                                             cTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGcgtcgt                                                                                          >  4:332012/1‑130 (MQ=255)                                                                                   aGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGa                                                                <  5:368046/149‑1 (MQ=255)                                                                                   aGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGa                                                                <  3:321261/149‑1 (MQ=255)                                                                                                ccACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAg                                                   >  6:116225/1‑149 (MQ=255)                                                                                                 cACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAgg                                                  <  1:360066/149‑1 (MQ=255)                                                                                                    gcagcaCCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATTAGCTACAGCGGCAGGCCt                                               <  7:182862/149‑1 (MQ=255)                                                                                                      agcaCCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCg                                             <  3:218545/149‑1 (MQ=255)                                                                                                           cGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGaaac                                        >  6:111899/1‑148 (MQ=255)                                                                                                            gCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAac                                       <  4:161717/149‑1 (MQ=255)                                                                                                             cTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAaca                                      >  2:61101/1‑149 (MQ=255)                                                                                                                ttCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACAcc                                    <  3:225098/148‑1 (MQ=255)                                                                                                                   cTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAGTTTGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACACCCt                                  <  1:289439/148‑1 (MQ=255)                                                                                                                     tATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACACCCTgggg                              >  4:22348/1‑149 (MQ=255)                                                                                                                      aTCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACACCCTgggg                              <  1:51236/148‑1 (MQ=255)                                                                                                                       tCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACACCCTGGGGc                             <  2:190709/148‑1 (MQ=255)                                                                                                                             gTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACACCCTGGGGCTGAAccc                      >  6:306822/1‑149 (MQ=255)                                                                                                                                 cccGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACACCCTGGGGCTGAACCCGGTc                  <  5:269035/149‑1 (MQ=255)                                                                                                                                      gTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAAccggtactgctactcgggggaccagtgataaggaacagcggtgctgcgtgggttctgccgacctgcaaagtcatgcagggaacttgccacacccattggttacccgac              <  1:107764‑M2/149‑109 (MQ=255)                                                                                                                                        aGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAAccggtactgctactcgggtgaccagtgataaggaacagcggtgctgcgtgggttctgccgacctgcaaagtcatgcagggaacttgccacacccattg                        >  2:293011‑M2/1‑39 (MQ=255)                                                                                                                                        aGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAAccggtactgctactcgggtgaccagtgataaggaacagcggtgctgcgtgggttctgccgacctgcaaagtcatgcagggaacttgccacacccattg                        <  1:293011‑M2/137‑99 (MQ=255)                                                                                                                                          cAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAAccggtactgctactcgggtgaccagtgataaggaacagcggtgctgcgtgggttctgccgacctgcaaagtcatgcagggaacttgccacacccattggttacccgcggttc          <  8:317854‑M2/149‑113 (MQ=255)                                                                                                                                           aGTACCGGttgctgtggcgggtgcacagccctgagcccggtactgctactcgggtgaccagtgataaggaacagcggtgctgcgtgggttctgccgacctgcaaagtcatgcagggaacttgccacacccattggttacccgactttcg         <  8:182862‑M1/149‑142 (MQ=255)                                                                                                                                           aGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAAccggtactgctactcgggtgaccagtgataaggaacagcggtgctgcgtgggttctgccgacctgcaaagtcatgcagggaacttgccacacccattggttacccgactttcg         <  2:99893‑M2/149‑114 (MQ=255)                                                                                                                                            gTACCGGttgctgtggcgggtgcacagccctgagcccggtactgctactcgggtgaccagtgataaggaacagcggtgctgcgtgggttctgccgacctgcaaagtcatgcagggaacttgccacacccattgg                       <  7:239172‑M1/134‑128 (MQ=255)                                                                                                                                            gTACCGGttgctgtggcgggtgcacagccctgagcccggtactgctactcgggtgaccagtgataaggaacagcggtgctgcgtgggttctgccgacctgcaaagtcatgcagggaacttgccacacccattgg                       >  8:239172‑M1/1‑7 (MQ=255)                                                                                                                                               ccGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACACCCTGGGGCTGAACCCGGTCATCGGCATccgcc     <  2:46127/148‑1 (MQ=255)                                                                                                                                                cGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGAt                                                                  <  6:266564/86‑1 (MQ=255)                                                                                                                                                cGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGAt                                                                  >  5:266564/1‑86 (MQ=255)                                                                                                                                                  gttgctgtggcgggtgcacagccctgagcccggtactgctactcgggtgaccagtgataaggaacagcggtgctgcgtgggttctgccgacctgcaaagtcatgcagggaacttgccacacccattggttacccgactttcgtgtaatg  >  2:188079‑M1/1‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                     ACAGCCCAGTGAAGGGCTGTCTTGCGCATTACACGAAAGTCGGGTAACCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACACCCTGGGGCTGAACCCGGTCATCGGCATCCGCCGCA  >  NC_002947/5699315‑5699607

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.