New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5699460	56 (0.950)	5 (0.090)	5/240	NT	9.0%	intergenic (+206/‑63)	PP_5002/phaA	hypothetical protein/poly(3‑hydroxyalkanoate) polymerase
	?	NC_002947	= 5699488	48 (0.870)					intergenic (+234/‑35)	PP_5002/phaA	hypothetical protein/poly(3‑hydroxyalkanoate) polymerase

CATTACACGAAAGTCGGGTAACCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACACCCTGGGGCTGAACCCGGTCATCGGCATCCGCCGCAAGGACCTGTTGAGCTCGGCACGCA  >  NC_002947/5699341‑5699631                                                                                                                                                    |                                                                                                                                                 cATTACACGAAAGTCGGGTAACCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAAc                                                                                                                                                 >  2:188079‑M2/1‑148 (MQ=255)        cGAAAGTCGGGTAACCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAAccggtact                                                                                                                                          <  8:182862‑M2/149‑9 (MQ=255)         gAAAGTCGGGTAACCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTc                                                                                                                                         >  2:360066/1‑149 (MQ=255)                gggTAACCAATGTGTGTGGAAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCa                                                                                                                                   <  2:117103/148‑1 (MQ=255)                 ggTAACCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACAGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAgg                                                                                                                                 <  5:200485/149‑1 (MQ=255)                     aCCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACCCAGCACCCCTGTTCCTTATAACTGGACACCCGACTAGCACTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGAACTCGTCTCAGGACaa                                                                                                                             >  3:43932/1‑149 (MQ=255)                      ccAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAAccggtac                                                                                                                                           <  7:239172‑M2/134‑8 (MQ=255)                      ccAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAAccggtac                                                                                                                                           >  8:239172‑M2/1‑127 (MQ=255)                      ccAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAAc                                                                                                                            <  7:335976/149‑1 (MQ=255)                       cAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACg                                                                                                                           >  1:180358/1‑149 (MQ=255)                             gtgtGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGcgt                                                                                                                     <  2:180358/149‑1 (MQ=255)                             gtgtGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCACGACAACGGAGcgt                                                                                                                     >  4:321261/1‑149 (MQ=255)                              tgtgGCAAGTTCGCTGCATGAGTTTGCAGGTCGGCAGAACCCAGGCAGCAGGGCTGTTCCTTATGAGTGGTCTCCCGAGTAGCAGTACCTGGGTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGcgtc                                                                                                                    <  4:43932/149‑1 (MQ=255)                                tgGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGACACAGCAACCGTAACTCGTCTCAGGACAACGGAGcgtcg                                                                                                                   >  4:218545/1‑148 (MQ=255)                                  gCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCGCGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGcgtcg                                                                                                                   >  1:190709/1‑146 (MQ=255)                                  gCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTa                                                                                                                 <  3:108838/148‑1 (MQ=255)                                    aaGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑At                                                                                                             <  2:75983/149‑1 (MQ=255)                                      gTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑At                                                                                                             >  2:51236/1‑147 (MQ=255)                                      gTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGa                                                                                                           <  3:242098/149‑1 (MQ=255)                                             gCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAAc                                                                                                      >  3:161717/1‑147 (MQ=255)                                             gCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAAc                                                                                                      >  4:225098/1‑147 (MQ=255)                                              cATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAAc                                                                                                      >  2:289439/1‑146 (MQ=255)                                                 gACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCAGCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAg                                                                                                                                  >  4:25536/1‑116 (MQ=255)                                                 gACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCAGCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAg                                                                                                                                  <  3:25536/116‑1 (MQ=255)                                                   cTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGcgtcgt                                                                                                                  >  4:332012/1‑130 (MQ=255)                                                   cTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGcgtcgt                                                                                                                  <  3:332012/130‑1 (MQ=255)                                                         aGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGa                                                                                        <  5:368046/149‑1 (MQ=255)                                                         aGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGa                                                                                        <  3:321261/149‑1 (MQ=255)                                                                      ccACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAg                                                                           >  6:116225/1‑149 (MQ=255)                                                                       cACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAgg                                                                          <  1:360066/149‑1 (MQ=255)                                                                          gcagcaCCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATTAGCTACAGCGGCAGGCCt                                                                       <  7:182862/149‑1 (MQ=255)                                                                            agcaCCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCg                                                                     <  3:218545/149‑1 (MQ=255)                                                                                 cGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGaaac                                                                >  6:111899/1‑148 (MQ=255)                                                                                  gCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAac                                                               <  4:161717/149‑1 (MQ=255)                                                                                   cTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAaca                                                              >  2:61101/1‑149 (MQ=255)                                                                                      ttCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACAcc                                                            <  3:225098/148‑1 (MQ=255)                                                                                         cTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAGTTTGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACACCCt                                                          <  1:289439/148‑1 (MQ=255)                                                                                           tATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACACCCTgggg                                                      >  4:22348/1‑149 (MQ=255)                                                                                            aTCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACACCCTgggg                                                      <  1:51236/148‑1 (MQ=255)                                                                                             tCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACACCCTGGGGc                                                     <  2:190709/148‑1 (MQ=255)                                                                                                   gTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACACCCTGGGGCTGAAccc                                              >  6:306822/1‑149 (MQ=255)                                                                                                       cccGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACACCCTGGGGCTGAACCCGGTc                                          <  5:269035/149‑1 (MQ=255)                                                                                                            gTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAAccggtactgctactcgggggaccagtgataaggaacagcggtgctgcgtgggttctgccgacctgcaaagtcatgcagggaacttgccacacccattggttacccgac                                      <  1:107764‑M2/149‑109 (MQ=255)                                                                                                              aGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAAccggtactgctactcgggtgaccagtgataaggaacagcggtgctgcgtgggttctgccgacctgcaaagtcatgcagggaacttgccacacccattg                                                >  2:293011‑M2/1‑39 (MQ=255)                                                                                                              aGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAAccggtactgctactcgggtgaccagtgataaggaacagcggtgctgcgtgggttctgccgacctgcaaagtcatgcagggaacttgccacacccattg                                                <  1:293011‑M2/137‑99 (MQ=255)                                                                                                                cAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAAccggtactgctactcgggtgaccagtgataaggaacagcggtgctgcgtgggttctgccgacctgcaaagtcatgcagggaacttgccacacccattggttacccgcggttc                                  <  8:317854‑M2/149‑113 (MQ=255)                                                                                                                 aGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAAccggtactgctactcgggtgaccagtgataaggaacagcggtgctgcgtgggttctgccgacctgcaaagtcatgcagggaacttgccacacccattggttacccgactttcg                                 <  2:99893‑M2/149‑114 (MQ=255)                                                                                                                     ccGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACACCCTGGGGCTGAACCCGGTCATCGGCATccgcc                             <  2:46127/148‑1 (MQ=255)                                                                                                                      cGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGAt                                                                                          >  5:266564/1‑86 (MQ=255)                                                                                                                      cGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGAt                                                                                          <  6:266564/86‑1 (MQ=255)                                                                                                                         gCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACACCCGGGGGCTGAACCCGGTCATCGGCATCCGCCGCAAg                        <  5:111899/149‑1 (MQ=255)                                                                                                                                  tgtgCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACACCCTGGGGCTGAACCCGGTCATCGGCATCCGCCGCAAGGACCTGtt                >  1:243807/1‑148 (MQ=255)                                                                                                                                    tgCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACACCCTGGGGCTGAACCCGGTCATCGGCATCCGCCGCAAGGACCTGTTGa              <  5:116225/148‑1 (MQ=255)                                                                                                                                    tgCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACACCCTGGGGCTGAACCCGGTCATCGGCATCCGCCGCAAGGACCTGTTGAg             >  4:259066/1‑149 (MQ=255)                                                                                                                                         ccGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACACCCTggg                                                       >  7:194710/1‑102 (MQ=255)                                                                                                                                         ccGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACACCCTggg                                                       <  8:194710/102‑1 (MQ=255)                                                                                                                                         ccGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACACCCTGGGGCTGAACCCGGTCATCGGCATCCGCCGCAAGGACCTGTTGAGCTCgg        >  4:330353/1‑149 (MQ=255)                                                                                                                                               caGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACACCCTGGGGCTGAACCCGGTCATCGGCATCCGCCGCAAGGACCTGTTGAGCTCGgcacgca  <  3:259066/149‑1 (MQ=255)                                                                                                                                                aacAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGaa                                                                  <  2:124904/82‑1 (MQ=255)                                                                                                                                                aacAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGaa                                                                  >  1:124904/3‑84 (MQ=255)                                                                                                                                                    |                                                                                                                                                 CATTACACGAAAGTCGGGTAACCAATGGGTGTGGCAAGTTCCCTGCATGACTTTGCAGGTCGGCAGAACCCACGCAGCACCGCTGTTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAG‑ATGAGTAACAAGAACAACGATGAGCTACAGCGGCAGGCCTCGGAAAACACCCTGGGGCTGAACCCGGTCATCGGCATCCGCCGCAAGGACCTGTTGAGCTCGGCACGCA  >  NC_002947/5699341‑5699631

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.