New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 372927	52 (0.880)	3 (0.050)	3/240	NT	5.8%	coding (169/1953 nt)	dgcB	dimethylglycine dehydrogenase subunit
	?	NC_002947	= 372955	48 (0.870)					coding (197/1953 nt)	dgcB	dimethylglycine dehydrogenase subunit

GCAGTGCTCGGTGCCTTGCGCCGGGTGCGCATGTGGCGCCGTGGCCGGCCGTCCAAGGTCAACCTGATCGGCGGCCTGCTGGCCATGCCGCGCCGCTACCTGGTGGACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATGGTTTTGGCCTGCAGAGCAAGATCCTCGGCTACGCACTGCTGATCGCCACGGTGATCATGTTCACCGGTGCCATCTTTGTCTTCA  >  NC_002947/372807‑373098                                                                                                                                                     |                                                                                                                                                gCAGTGCTCGGTGCCTTGCGCCGGGTGCGCATGTGGCGCCGTGGCCGGCCGTCCAAGGTCAACCTGATCGGCGGCCTGCTGGCCATGCCGCGCCGCTACCTGGTGGACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGAc                                                                                                                                                 >  3:316001/1‑149 (MQ=255)                ttGCGCCGGGTGCGCATGTGGCGCCGTGGCCGGCCGTCCAAGGTCAACCTGATCGGCGGCCTGCTGGCCATGCCGCGCCGCTACCTGGTGGACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTgc                                                                                                                                  >  2:311064/1‑149 (MQ=255)                      cGGGTGCGCATGTGGCGCCGTGGCCGGCCGTCCAAGGTCAACCTGATCGGCGGCCTGCTGGCCATGCCGCGCCGCTACCTGGTGGACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTgcgggcgg                                                                                                                            <  1:295330/149‑1 (MQ=255)                       gggTGCGCATGTGGCGCCGTGGCCGGCCGTCCAAGGTCAACCTGATCGGCGGCCTGCTGGCCATGCCGCGCCGCTACCTGGTGGACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGggcggc                                                                                                                           <  6:299696/149‑1 (MQ=255)                          tGCGCATGTGGCGCCGTGGCCGGCCGTCCAAGGTCAACCTGATCGGCGGCCTGCTGGCCATGCCGCGCCGCTACCTGGTGGACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCttt                                                                                                                        <  6:66505/149‑1 (MQ=255)                            cgcATGTGGCGCCGTGGCCGGCCGTCCAAGGTCAACCTGATCGGCGGCCTGCTGGCCATGCCGCGCCGCTACCTGGTGGACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTtg                                                                                                                       <  2:112992/148‑1 (MQ=255)                             tgaTGTGGCGCCGTGGCCGGCCGTCCAAGGTCAACCTGATCGGCGGCCTGCTGGCCATGCCGCGCCGCTACCTGGTGGACCTGCACCTCGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTtgt                                                                                                                      <  1:182358/146‑1 (MQ=255)                               aTGTGGCGCCGTGGCCGGCCGTCCAAGGTCAACCTGATCGGCGGCCTGCTGGCCATGCCGCGCCGCTACCTGGTGGACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACccacgtg                                                                                                                                          >  6:15698‑M2/1‑119 (MQ=255)                               aTGTGGCGCCGTGGCCGGCCGTCCAAGGTCAACCTGATCGGCGGCCTGCTGGCCATGCCGCGCCGCTACCTGGTGGACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACccacgtg                                                                                                                                          <  5:15698‑M2/126‑8 (MQ=255)                               aTGTGGCGCCGTGGCCGGCCGTCCAAGGTCAACCTGATCGGCGGCCTGCTGGCCATGCCGCGCCGCTACCTGGTGGACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGtgct                                                                                                                   <  4:316001/149‑1 (MQ=255)                               aTGTGGCGCCGTGGCCGGCCGTCCAAGGTCAACCTGATCGGCGGCCTGCTGGCCAAGCCGCGCCGCTACCTGGTGGACCAGCACCACCTGGTTGAGCCCGACAAATACATGTCCAAGAACCCCGTGGCCACTGCGGGCGGCTTtgt                                                                                                                      >  2:182358/1‑146 (MQ=255)                                tgtgGCGCCGTGGCCGGCCGTCCAAGGTCAACCTGATCGGCGGCCTGCTGGCCATGCCGCGCCGCTACCTGGTGGACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGtgctg                                                                                                                  <  3:46300/149‑1 (MQ=255)                                    gcgcCGTGGCCGGCCGTCCAAGGTCAACCTGATCGGCGGCCTGCTGGCCATGCCGCGCCGCTACCTGGTGGACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCttt                                                                                                                        >  6:323154/1‑139 (MQ=255)                                    gcgcCGTGGCCGGCCGTCCAAGGTCAACCTGATCGGCGGCCTGCTGGCCATGCCGCGCCGCTACCTGGTGGACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCttt                                                                                                                        <  5:323154/139‑1 (MQ=255)                                         gTGGCCGGCCGTCCAAGGTCAACCTGATCGGCGGCCTGCTGGCCATGCCGCGCCGCTACCTGGTGGACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGtgctgtctgctgtc                                                                                                         <  1:291993/149‑1 (MQ=255)                                               ggccgTCAAAGGTCAACCTGATCGGCGGCATGCTGGCCATGAAGCGCCGCTACCTGGTGGACCTGCAAAACGTGGTTGATCGAGACAAATACATTTCAAAGAAACAAGTTGCCACTGCGGGCGGCTTTTttctttctgatgtaattgc                                                                                                    >  1:157950/1‑142 (MQ=255)                                                    tCCAAGGTCAACCTGATCGGCGGCCTGCTGGCCATGCCGCGCCGCTACCTGGTGGACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCt                                                                                              >  6:223418/1‑149 (MQ=255)                                                       aaGGTCAACCTGATCGGCGGCCTGCTGGCCATGCCGCGCCGCTACCTGGTGGAGCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGt                                                                                           <  1:311064/149‑1 (MQ=255)                                                       aaGGTCAACCTGATCGGCGGCCTGCTGGCCATGCCGCGCCGCTACCTGGTGGACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGt                                                                                           >  7:295599/1‑149 (MQ=255)                                                       aaGGTCAACCTGATCGGCGGCCTGCTGGCCATGCCGCGCCGCTACCTGGTGGACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGt                                                                                           <  8:152718/149‑1 (MQ=255)                                                               ccTGATCGGCGGCCTGCTGGCCATGCCGCGCCGCTACCTGGTGGACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGtgc                                                                                                                    >  2:129867/1‑116 (MQ=255)                                                                             tgctgGCCATGCCGCGCCGCTACCTGGTGGACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATGGTTTTGGCCTGCagag                                                                      >  3:316041/1‑148 (MQ=255)                                                                               ctgGCCATGCCGCGCCGCTACCTGGTGGACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATGGTTTTGGCCTGCAGAGCa                                                                    <  2:185154/148‑1 (MQ=255)                                                                                  gCCATGCCGCGCCGCTACCTGGTGGACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGtgct                                                                                                                   >  3:172970/1‑98 (MQ=255)                                                                                  gCCATGCCGCGCCGCTACCTGGTGGACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGtgct                                                                                                                   <  4:172970/98‑1 (MQ=255)                                                                                     aTGCCGCGCCGCTACCTGGTGGCCCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGGATGGTTTTGGCCTGCAGAGCAAGATCCt                                                             >  7:90997/1‑149 (MQ=255)                                                                                        ccgcgccgcTACCTGGTGGACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGACACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATGGTTTTGGCCTGCAGAGCAAGATCCTCgg                                                          >  4:116595/1‑149 (MQ=255)                                                                                           cgccgcTACCTGGTGGACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATGGTTTTGGCCTGCAGAGCAAGATCCTCGGCTa                                                       <  2:365090/149‑1 (MQ=255)                                                                                              cgcgACCTGGTGGACCTGCACCACGTTGGTTATCGCTACAAATACATGTCCACGACCCACGTTGCAAATGCGTGCGGCTTTGTGCTGGATTCTGTCCTGGAAATTCTGGTTCATGGTTTTGTCATGCAGAGCAAGATCCTCGGCTACGc                                                    <  2:157950/149‑1 (MQ=255)                                                                                                    cTGGTGGACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATGGTTTTGGc                                                                              <  7:330429/117‑1 (MQ=255)                                                                                                    cTGGTGGACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATGGTTTTGGc                                                                              >  8:330429/1‑117 (MQ=255)                                                                                                      ggtggACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATGGTTTTGGCCTGCAGAGCAAGATCCTCGGCTACGCACTGCTGa                                            >  6:6663/1‑149 (MQ=255)                                                                                                       gtggACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATGGTTTTGGCCTGCAGAGCAAGATCCTCGGCTACGCACTGCTGa                                            <  5:223418/148‑1 (MQ=255)                                                                                                               gCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACccacgtggtgcaggtccaccaggtagcggcgcggcatggc                                                                                                         >  7:149629‑M2/1‑39 (MQ=255)                                                                                                               gCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACccacgtggtgcaggtccaccaggtagcggcgcggcatggc                                                                                                         <  8:149629‑M2/79‑41 (MQ=255)                                                                                                               gCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATGGTTTTGGCCTGCAGAGCAAGATCCTCGGCTACGCACTGCTGATCGCCACgg                                   >  8:223693/1‑149 (MQ=255)                                                                                                                caccacGTGTTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATGGTTTTGGCCTGCAGAGCAAGATCCTCGGCTACGCACTGCTGATCAccgtggc                                  <  4:316041/149‑6 (MQ=255)                                                                                                                caccacGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATGGTTTTGGCCTGCAGAGCAAGATCCTCGGCTACGCACTGCTGATCGCCACg                                    <  3:116595/147‑1 (MQ=255)                                                                                                                 accacGTGGTTGAGCGCGACAAATACATGTCCAAGACccacgtggtgcaggtccaccaggtagcggcgcggcatggccagcaggccgccgatcaggttgaccttggacggccggccacggcgccacatgcgcacccggcgcaaggcacc                                 <  4:324668‑M2/149‑113 (MQ=255)                                                                                                                  ccacGTGGTTGAGCGCGACAACTACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATGGTTTTGGCCTGCAGAGCAAGATCCTCGGCTACGCACTGCTGATCGCCACGGTGa                                <  5:214893/149‑1 (MQ=255)                                                                                                                  ccacGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATGGTTTTGGCCTGCAGAGCAAGATCCTCGGCTACGCACTGCTGATCGCCACGGTGa                                <  7:313958/149‑1 (MQ=255)                                                                                                                    acGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATGGTTTTGGCCTGCAGAGCAAGATCCTCGGCTACGCACTGCTGATCGCCACGGTGAt                               >  3:366586/1‑148 (MQ=255)                                                                                                                    acGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATGGTTTTGGCCTGCAGAGCAAGATCCTCGGCTACGCACTGCTGATCGCCACGGTGAt                               >  2:370821/1‑148 (MQ=255)                                                                                                                      gTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATg                                                                                      <  8:138544/91‑1 (MQ=255)                                                                                                                      gTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATg                                                                                      >  7:138544/1‑91 (MQ=255)                                                                                                                          ttGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATGGTTTTGGCCTGCAGAGCAAGATCCTCGGCTACGCACTGCTGATCGCCACGGTGATCATGtt                         >  5:300507/1‑148 (MQ=255)                                                                                                                             aGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATGGTTTTGGCCTGCAGAGCAAGATCCTCGGCTACGCACTGCTGATCGCCACGGTGATCATGTTCAc                      <  7:223693/148‑1 (MQ=255)                                                                                                                             aGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATGGTTTTGGCCTGCAGAGCAAGATCCTCGGCTACGCACTGCTGATCGCCACGGTGATCATGTTCAc                      <  5:6663/148‑1 (MQ=255)                                                                                                                                  gACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATGGTTTTGGc                                                                              >  8:354050/1‑87 (MQ=255)                                                                                                                                  gACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATGGTTTTGGc                                                                              <  7:354050/87‑1 (MQ=255)                                                                                                                                  gACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATGGTTTTGGCCTGCAGAGCAAGATCCTCGGCTACGCACTGCTGATCGCCACGGTGATCATGTTCACCGGTGc                >  7:102087/1‑149 (MQ=255)                                                                                                                                       aTACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATGGTTTTGGCCTGCAGAGCAAGATCCTCGGCTACGCACTGCTGATCGCCACGGTGATCATGTTCACCGGTGCCATCt           <  1:370821/149‑1 (MQ=255)                                                                                                                                        tACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATGGTTTTGGCCTGCAGAGCAAGATCCTCGGCTACGCACTGCTGATCGCCACGGTGATCATGTTCACCGGTGCCATCtt          <  8:295599/149‑1 (MQ=255)                                                                                                                                             gTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATGGTTTTGGCCTGCAGAGCAAGATCCTCGGCTACGCACTGCTGATCGCCACGGTGATCATGTTCACCGGTGCCATCTTTGTCt     >  1:18191/1‑149 (MQ=255)                                                                                                                                                 aaGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATGGTTTTGGCCTGCAGAGCAAGATCCTCGGCTACGCACTGCTGATCGCCACGGTGATCATGTTCACCGGTGCCATCTTTGTCTTCa  >  1:300085/1‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                                GCAGTGCTCGGTGCCTTGCGCCGGGTGCGCATGTGGCGCCGTGGCCGGCCGTCCAAGGTCAACCTGATCGGCGGCCTGCTGGCCATGCCGCGCCGCTACCTGGTGGACCTGCACCACGTGGTTGAGCGCGACAAATACATGTCCAAGACCCACGTGGCCACTGCGGGCGGCTTTGTGCTGTCTGCTGTCCTGGCCATTCTGGTGCATGGTTTTGGCCTGCAGAGCAAGATCCTCGGCTACGCACTGCTGATCGCCACGGTGATCATGTTCACCGGTGCCATCTTTGTCTTCA  >  NC_002947/372807‑373098

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.