New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1126593 =	34 (0.580)	7 (0.120)	7/248	NT	20.0%	intergenic (‑47/+102)	tdcG‑II/gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
	?	NC_002947	1126650 =	23 (0.400)					intergenic (‑104/+45)	tdcG‑II/gcvP‑I	L‑serine dehydratase/glycine dehydrogenase

GATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGG‑T‑AAA‑CC‑GCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGCCTTC  >  NC_002947/1126514‑1126796                                                                                                                                             |                                                                                                                                                   gatCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGCAAGCGGAGGGTAAGGCACCAACCCCATCGCCGG‑TGAAC‑CC‑GCACCCACACagcc                                                                                                                                         >  6:150081/1‑147 (MQ=255)       gAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGG‑T‑AAACCC‑GCTCCTACACAGAGccc                                                                                                                                      <  3:141137/146‑1 (MQ=255)             gTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTTACCGCGGATGCGGGGGGTTAGGCCCCCACGCCATCGCGGGTT‑AAC‑CC‑GCGCCGACACAGAGccccccccccca                                                                                                                             >  6:94222/1‑147 (MQ=255)                gAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGG‑T‑AAACCC‑GCTCCTACACAGAGCCCGCCa                                                                                                                                  <  6:106106/141‑1 (MQ=255)                gAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGG‑T‑AAACCC‑GCTCCTACACAGAGCCCGCCa                                                                                                                                  >  5:106106/1‑141 (MQ=255)                            tGACCTGGGGCCCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGG‑T‑AAACCC‑GCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGa                                                                                                              <  5:150081/149‑1 (MQ=38)                                              ccAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGTAGGTATAGCCACCATCGCATTCGCGGG‑T‑AAACCC‑GCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCt                                                                                             <  4:366172/148‑1 (MQ=255)                                                              aCATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGG‑T‑AAACCC‑GCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGAc                                                                            <  5:94222/149‑1 (MQ=255)                                                                  tGAGCCCCGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGG‑T‑AAACCC‑GCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCtcga                                                                                 <  5:142485/140‑1 (MQ=255)                                                                   gAGCCCTGTAGGCGCGGGTTTAACCGCGAATGCGGAGGGATAGCCACCCACGCATTAGCGGG‑TAAAA‑CC‑GCAGCAACACAGAGCCCCCCACCCCACCCAGGTGGCGGGGGGGGCTATAAGGCGGGCGGATTGCGCTCGCACGACggg                                                                         >  2:88910/1‑147 (MQ=255)                                                                         tGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGG‑T‑AAACCC‑GCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAggg                                                                                                           <  5:116218/107‑1 (MQ=255)                                                                           tAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTGGCGGG‑T‑AAACCC‑GCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGcaca                                                               >  1:127478/1‑149 (MQ=255)                                                                                  GGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTGGCGGG‑T‑AAA‑CCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGtt                                                        >  2:127478‑M1/1‑149 (MQ=255)                                                                                    gTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGG‑T‑AAACCC‑GCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGc                                                      <  3:30592/149‑1 (MQ=255)                                                                                         cccGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGG‑T‑AAACCC‑GCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCg                                                 >  1:148750/1‑149 (MQ=255)                                                                                          ccGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGG‑T‑AAACCC‑GCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGc                                                >  7:229711/1‑149 (MQ=255)                                                                                           cgcgAATGCGGAGGTATAGCCACCATCGCATTCGCGGG‑T‑AAACCC‑GCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGcc                                               >  1:210637/1‑149 (MQ=255)                                                                                            gcgAATGCGGAGGTATAGCCACCATCGCATTCGCGGG‑T‑AAACCC‑GCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGcc                                               >  1:333737/1‑148 (MQ=255)                                                                                             ccgcgaatgcgatggtggctatacctccgcattcgcgggtaaacccgcTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCtcga                                                                                 <  5:362944‑M2/68‑1 (MQ=255)                                                                                             ccgcgaatgcgatggtggctatacctccgcattcgcgggtaaacccgcTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCtcga                                                                                 >  6:362944‑M2/49‑116 (MQ=255)                                                                                                 gaatgcgatggtggctatacctccgcattcgcgggtaaacccgcTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATa                                                                                         >  2:178131‑M2/45‑104 (MQ=255)                                                                                                 gaatgcgatggtggctatacctccgcattcgcgggtaaacccgcTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATa                                                                                         <  1:178131‑M2/60‑1 (MQ=255)                                                                                                    ggAGGTATAGCCACCATCGCATTCGCGGG‑T‑AAACCC‑GCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTc                                                  >  4:204131/1‑137 (MQ=255)                                                                                                    ggAGGTATAGCCACCATCGCATTCGCGGG‑T‑AAACCC‑GCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTc                                                  <  3:204131/137‑1 (MQ=255)                                                                                                           taGCCACCATCGCATTCGCGGG‑T‑AAACCC‑GCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGAc                                <  7:201757/148‑1 (MQ=255)                                                                                                             gCCACCATCGCATTCGCGGG‑T‑AAACCC‑GCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGt                                                   <  5:320881/127‑1 (MQ=255)                                                                                                             gCCACCATCGCATTCGCGGG‑T‑AAACCC‑GCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGt                                                   >  6:320881/1‑127 (MQ=255)                                                                                                              ccaccaTCGCATTCGCGGG‑T‑AAACCC‑GCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCgg                            >  2:142821/1‑149 (MQ=255)                                                                                                                                cgggtaaacccgcTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAg             <  2:210637‑M2/136‑1 (MQ=255)                                                                                                                                   gtaaacccgcTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACg                                        <  1:204645‑M2/109‑1 (MQ=255)                                                                                                                                   gtaaacccgcTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACg                                        >  2:204645‑M2/11‑119 (MQ=255)                                                                                                                                    taaacccgcTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACt         >  7:117784‑M2/10‑149 (MQ=255)                                                                                                                                        cccgcTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGcc     >  5:57917‑M2/6‑149 (MQ=255)                                                                                                                                        cccgcTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGcc     >  8:308162‑M2/6‑149 (MQ=255)                                                                                                                                         cggcTCCTACACAGCGCCCGCCACCCAAGCCCGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACcggc                   <  8:160126‑M2/130‑1 (MQ=255)                                                                                                                                         ccgcTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGCCt    >  6:298082‑M2/5‑149 (MQ=255)                                                                                                                                         ccgcTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTAGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGcc     >  8:137724‑M2/5‑148 (MQ=255)                                                                                                                                           gcTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGCCTTc  <  1:19826‑M2/147‑1 (MQ=255)                                                                                                                                             |                                                                                                                                                   GATCTTGAACAGGTCGAAGACGCTCAGTGACATGTGGACCTCCTGCCAGGTTGTTGGGTGGACATTGAGCCCTGTAGGCGCGGGTTTACCCGCGAATGCGGAGGTATAGCCACCATCGCATTCGCGGG‑T‑AAA‑CC‑GCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGCCTTC  >  NC_002947/1126514‑1126796

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.