New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1204282	72 (1.220)	4 (0.070)	4/246	NT	5.9%	coding (625/645 nt)	gspN	type II secretion pathway protein GspN
	?	NC_002947	= 1204318	59 (1.040)					intergenic (+16/+144)	gspN/PP_1056	type II secretion pathway protein GspN/iron‑chelator utilization protein

CGACCTGCCAGGACGCCAGGTGCAGGTGGTGTTCCAGCTGCAGCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCTGCGCTTTGCGTGGCACCGGCGAAGACGGCAGATCAGGCAATCACGATCA  >  NC_002947/1204173‑1204464                                                                                                                                                  |                                                                                                                                                   cGACCTGCCAGGACGCCAGGTGCAGGTGGTGTTCCAGCTGCAGCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGgcc                                                                                                                                                 >  3:241932‑M2/1‑146 (MQ=255)        ccAGGACGCCAGGTGCAGGTGGTGTTCCAGCTGCAGCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTa                                                                                                                                          <  5:156980/149‑1 (MQ=255)        ccAGGACGCCAGGTGCAGGTGGTGTTCCAGCTGCAGCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTa                                                                                                                                          <  2:270273/149‑1 (MQ=255)          aGGACGCCAGGTGCAGGTGGTGTTCCAGCTGCAGCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTg                                                                                                                                            >  7:302126/1‑145 (MQ=255)          aGGACGCCAGGTGCAGGTGGTGTTCCAGCTGCAGCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGAAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTg                                                                                                                                            >  5:111270/1‑145 (MQ=255)            gACGCCAGGTGCAGGTGGTGTTCCAGCTGCAGCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATa                                                                                                                                      <  2:4930/149‑1 (MQ=255)             aCGCCAGGTGCAGGTGGTGTTCCAGCTGCAGCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAg                                                                                                                                     <  6:210339/149‑1 (MQ=255)              cGCCAGGTGCAGGTGGTGTTCCAGCTGCAGCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAgg                                                                                                                                    <  4:196673/149‑1 (MQ=255)                  aggtgcaggtgGTGTTCCAGCTGCAGCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGt                                                                                                                                <  4:237641/149‑1 (MQ=255)                     tgcaggtgGTGTTCCTGCTGCAGCGTGATGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCGTCGTTGGTAAGCACCAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTgg                                                                                                                             <  6:16334/149‑1 (MQ=255)                     tgcaggtgGTGTTCCAGCTGCAGCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTgg                                                                                                                             <  1:150860/149‑1 (MQ=255)                     tgcaggtgGTGTTCCAGCTGCAGCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTgg                                                                                                                             <  5:144875/149‑1 (MQ=255)                         ggtggtGTTCCAGCTGCAGCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGt                                                                                                                         >  5:66728/1‑149 (MQ=255)                          gtggtgTTCCAGCTGCAGCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTc                                                                                                                        <  6:66728/149‑1 (MQ=255)                               gtTCCAGCTGCAGCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGa                                                                                                                      <  1:122986/146‑1 (MQ=255)                               gtTCCAGCTGCAGCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGa                                                                                                                      >  2:122986/1‑146 (MQ=255)                                ttCCAGCTGCAGCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCt                                                                                                                   <  6:111270/148‑1 (MQ=255)                                   cAGCTGCAGCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTc                                                                                                               >  4:74411/1‑149 (MQ=255)                                     gCTGCAGCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCACAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCt                                                                                                              >  4:276510/1‑148 (MQ=255)                                         cAGCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGt                                                                                                         >  6:119344/1‑149 (MQ=255)                                          aGCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTg                                                                                                        >  5:337888/1‑149 (MQ=255)                                               gAAGCGCAGTTGACGCCATTGTTCCGTGGGGCTCAATGGCTTGGACAGCAGGCCCTGGCGGGGCAGCGAGACCTTCCTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTCGCGGTCGAGCTTTTCTGACGAGCTTgg                                                                                                   >  5:240581/1‑149 (MQ=255)                                                 aGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTgggg                                                                                                 <  4:366739/149‑1 (MQ=255)                                                     cAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTg                                                                                              >  3:111617/1‑148 (MQ=255)                                                       gTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAAc                                                                                           >  2:192815/1‑149 (MQ=255)                                                       gTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAAc                                                                                           <  8:188335/149‑1 (MQ=255)                                                       gTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTAGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAAc                                                                                           <  4:240508/149‑1 (MQ=255)                                                       gTTGACGCAATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGCGACCTTCGTTGGTAAGCAACAACGTGGCGCGGACCCCTGTAGATAGGCTCTTTGCGGTCGAGCTTTTCTGAGGTGCTTGGGGATGAAc                                                                                           >  8:347276/1‑149 (MQ=255)                                                             gCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTg                                                                                     <  4:111617/149‑1 (MQ=255)                                                               cATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGt                                                                                   >  2:35524/1‑149 (MQ=255)                                                               cATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGt                                                                                   >  6:160645/1‑149 (MQ=255)                                                                 ttgttgCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGc                                                                                                <  3:275624/134‑1 (MQ=255)                                                                 ttgttgCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGc                                                                                                >  4:275624/1‑134 (MQ=255)                                                                      gCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATc                                                                             >  6:253711/1‑148 (MQ=255)                                                                       cGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCa                                                                            <  8:302126/148‑1 (MQ=255)                                                                          ggggCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATg                                                                        <  3:74411/149‑1 (MQ=255)                                                                            ggCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGt                                                                      <  5:108453/149‑1 (MQ=255)                                                                             gCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAATCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGtt                                                                     <  3:276510/149‑1 (MQ=255)                                                                             gCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGtt                                                                     >  3:186824/1‑149 (MQ=255)                                                                                 aaTGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTaaa                                                                 <  5:119344/149‑1 (MQ=255)                                                                                 aaTGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTaaa                                                                 >  6:202850/1‑149 (MQ=255)                                                                                          gACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAg                                                                                                           >  6:202060/1‑98 (MQ=255)                                                                                          gACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAg                                                                                                           <  5:202060/98‑1 (MQ=255)                                                                                          gACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAg                                                         >  6:133519/1‑148 (MQ=255)                                                                                           aCCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTGTTATCAAATGGTTTACACCGCGatg                                                         >  8:80117/1‑145 (MQ=255)                                                                                           aCCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCa                                                       <  1:35524/149‑1 (MQ=255)                                                                                             cGCAGGCCCTGGCGCGGCAGCGAGACCTTCGTTGGAAAGCACCAACGTCGCGCCGCCCCCTGGAGATAGCCTGTTGGCGCTCGAGCTTTTCTGAGGTGCTAGGGGCTGAACCGCTTCGTCTTATCAAAACTTTTAAACCGAGAAGCAgg                                                     >  5:274659/1‑149 (MQ=255)                                                                                                    ccTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCTGCGCt                                              <  3:290483/149‑1 (MQ=255)                                                                                                    ccTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCTGCGCt                                              >  6:181805/1‑149 (MQ=255)                                                                                                    ccTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCTGCGCt                                              >  5:244190/1‑149 (MQ=255)                                                                                                          ggggCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGgccccgccagggcctgcggtccaagccattgagccccacgcaacaatggcgtcaactgcgcttcaggctgcagctggaac                                                                    >  8:166220‑M2/1‑41 (MQ=255)                                                                                                          ggggCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGgccccgccagggcctgcggtccaagccattgagccccacgcaacaatggcgtcaactgcgcttcaggctgcagctggaac                                                                    <  7:166220‑M2/121‑81 (MQ=255)                                                                                                           gggCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCTGCGCTTTGCGTg                                       <  5:160645/149‑1 (MQ=255)                                                                                                             gCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGgccccgccagggcctgcggtccaagccattgagccccacgcaacaatggcgtcaactgcgcttcaggctgcagctggaacaccacct                                                             >  8:70944‑M2/1‑38 (MQ=255)                                                                                                             gCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGgccccgccagggcctgcggtccaagccattgagccccacgcaacaatggcgtcaactgcgcttcaggctgcagctggaacaccacct                                                             <  7:70944‑M2/125‑88 (MQ=255)                                                                                                                gCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAACCCGCGAAGCAGGCTGCGCTTTGCGTGGCAcc                                  >  7:117687/1‑149 (MQ=255)                                                                                                                 cGAGACCTTCGTTGGTAAGCAACAGCGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAAt                                                                         >  2:85948/1‑109 (MQ=255)                                                                                                                 cGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCTgcgc                                               >  4:257174/1‑135 (MQ=255)                                                                                                                 cGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCTgcgc                                               <  3:257174/135‑1 (MQ=255)                                                                                                                  gagaCCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCTGCGCTTTGCGTGGCACCgg                                <  5:133519/149‑1 (MQ=255)                                                                                                                        ttCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGACGACGCCTGCGATTTGCTTGGCACCGGctacga                          >  2:210506/1‑144 (MQ=255)                                                                                                                        ttCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCTGCGCTTTGCGTGGCACCGGCGAAGa                          >  3:357722/1‑149 (MQ=255)                                                                                                                          cGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCTGCGCTTTGCGTGGCACCGGCGAAGa                          <  5:202850/147‑1 (MQ=255)                                                                                                                                       caacGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCTGCGCTTTGCGTGGCACCGGCGAAGACGGCAGATCAGGCaa           >  5:250891/1‑149 (MQ=255)                                                                                                                                       caacGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTAGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCTGCGCTTTGCGTGGCACCGGCGAAGACGGCAGATCAGGCaa           <  6:337888/149‑1 (MQ=255)                                                                                                                                        cacGTTGCGCGGCCCCCTGTAGATAGGCTGTTGGCCGTCGCCCCTTTCTGAGGTGCTTGGGGCTGAACCGCGTGGTCTTATCAAATGGGTTAAACCGCGAAGCAGGCTGCGCTTTGCGTGGCACCGGCGAAGACGGCAGATCAGGCAAt          <  1:210506/148‑1 (MQ=255)                                                                                                                                           gTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCTGCGCTTTGCGTGGCACCGGCGAAGACGGCAGATCAGGCAATCAc       <  4:204244/149‑1 (MQ=255)                                                                                                                                            tGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTAGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCTGCGCTTTGCGTGGCACCGGCGAAGACGGCAGATCAGGCAATCAc       >  2:296551/1‑148 (MQ=255)                                                                                                                                              gcgcGGCCCCGTGTAGTTAGGCTGTTGGAGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCTTCGCTTTGCGTGGCACCGGCGAAGACGGCAGATCAGGCAACCACGa     <  7:347276/148‑1 (MQ=255)                                                                                                                                              gcgcGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACTGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCTGCGCTTTGCGTGGCACCGGCGAAGACGGCAGATCAGGCAATCACGa     <  1:192815/148‑1 (MQ=255)                                                                                                                                              gcgcGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCTGCGCTTTGCGTGGCACCGGCGAAGACGGCAGATCACGCAATCACGAt    >  8:273835/1‑149 (MQ=255)                                                                                                                                               cgcgGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCTGCGCTTTGCGTGGCACCGGCGAAGACGGCAGATCAGGCAATCACGATc   <  6:250891/149‑1 (MQ=255)                                                                                                                                                gcgGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAATCCGCGAAGCAGGCTGCGCTTTGCGTGGCACCGGCGAAGACGGCAGATCAGGCAATCACGATCa  <  8:117687/149‑1 (MQ=255)                                                                                                                                                gcgGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCTGCGCTTTGCGTGGCACCGGCGAAGACgg                       <  2:169103/128‑1 (MQ=255)                                                                                                                                                gcgGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCTGCGCTTTGCGTGGCACCGGCGAAGACgg                       >  1:169103/1‑128 (MQ=255)                                                                                                                                                  |                                                                                                                                                   CGACCTGCCAGGACGCCAGGTGCAGGTGGTGTTCCAGCTGCAGCCTGAAGCGCAGTTGACGCCATTGTTGCGTGGGGCTCAATGGCTTGGACCGCAGGCCCTGGCGGGGCAGCGAGACCTTCGTTGGTAAGCAACAACGTGGCGCGGCCCCCTGTAGATAGGCTGTTGGCGGTCGAGCTTTTCTGAGGTGCTTGGGGCTGAACCGCTTGGTCTTATCAAATGGTTTAAACCGCGAAGCAGGCTGCGCTTTGCGTGGCACCGGCGAAGACGGCAGATCAGGCAATCACGATCA  >  NC_002947/1204173‑1204464

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.