New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1362407	65 (1.100)	4 (0.070)	3/240	NT	6.2%	coding (797/1347 nt)	phoQ	sensor protein
	?	NC_002947	= 1362436	61 (1.100)					coding (826/1347 nt)	phoQ	sensor protein

TCTGTTGCGCAGTGAGCGTGAGCAGCGCACGCGCTACCGTGATTCGCTGGACGACCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTATTGCTGCGGCCGTTGCTCGACAGCCTGTGCAGCACCTTGGCCAAGGTTTACCG  >  NC_002947/1362291‑1362584                                                                                                                                                  |                                                                                                                                                      tCTGTTGCGCAGTGAGCGTGAGCAGCGCACGCGCTACCGTGATTCGCTGGACGACCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGtgc                                                                                                                                                    >  2:55807‑M2/1‑146 (MQ=255)    gTTGCGCAGTGAGCGTGAGCAGCGCACGCGCTACCGTGATTGGCTGGACGACCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGtgctg                                                                                                                                                  >  8:311887‑M2/1‑143 (MQ=255)     ttGCGCAGTGAGCGTGAGCAGCGCACGCGCTACCGTGATTCGCTGGACGACCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGtgctg                                                                                                                                                  >  5:301504‑M2/1‑142 (MQ=255)     ttGCGCAGTGAGCGTGAGCAGCGCACGCGCTACCGTGATTCGCTGGACGACCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGtgct                                                                                                                                                   >  4:320635‑M2/1‑142 (MQ=255)     ttGCGCAGTGAGCGCGAGCAGCGCACGCGCTACCGTGATTCGCTGGACGACCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGtgctgc                                                                                                                                                 >  3:292879‑M2/1‑142 (MQ=255)       gcgcAGTGAGCGTGAGCAGCGCACGCGCTACCGTGATTCGCTGGACGACCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGtgctgca                                                                                                                                                <  2:18104‑M2/147‑8 (MQ=255)         gcAGTGAGCGTGAGCAGCGCACGCGCTACCGTGATTCGCTGGACGACCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGc                                                                                                                                            <  5:136924/149‑1 (MQ=255)                gcgtgagcAGCGCACGCGCTACCGTGATTCGCTGGACGACCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATc                                                                                                                                      >  8:225340/1‑148 (MQ=255)                 cgtgagcAGCGCACGCGCTACCGTGATTCGCTGGACGACCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATc                                                                                                                                      >  3:113436/1‑147 (MQ=255)                  gtgagcAGCGCACGCGCTACCGTGATTCGCTGGACGACCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCTCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAg                                                                                                                                   <  7:186355/149‑1 (MQ=255)                     agcagcGCACGCGCTACCGTGATTCGCTGGACGACCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAgcgc                                                                                                                                <  7:225340/149‑1 (MQ=255)                      gcagcGCACGCGCTACCGTGATTCGCTGGACGACCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCaaa                                                                                                                                              >  5:220334/1‑134 (MQ=255)                      gcagcGCACGCGCTACCGTGATTCGCTGGACGACCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑a                                                                                                                              >  2:326515/1‑149 (MQ=255)                         gcgcACGCGCTACCGTGATTCGCTGGACGACCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGa                                                                                                                           <  7:148960/149‑1 (MQ=255)                             aCGCGCTACCGTGATTCGCTGGACGACCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGc                                                                                                                         >  2:373112/1‑147 (MQ=255)                             aCGCGCTACCGTGATTCGCTGGACGACCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCca                                                                                                                       <  7:168329/149‑1 (MQ=255)                                          aTTCGCTGGACGACCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTAc                                                                                                          >  5:197248/1‑149 (MQ=255)                                           ttCGCTGGACGACCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTAcc                                                                                                         <  6:197248/149‑1 (MQ=255)                                           ttCGCTGGACGACCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTAc                                                                                                          >  2:283172/1‑148 (MQ=255)                                              gCTGGACGACCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGa                                                                                                                                        >  1:9697/1‑116 (MQ=255)                                              gCTGGACGACCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGa                                                                                                                                        <  2:9697/116‑1 (MQ=255)                                              gCTGGACGACCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAg                                                                                                       <  1:373112/148‑1 (MQ=255)                                                tGGACGACCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTg                                                                                                    >  1:172336/1‑149 (MQ=255)                                                    cgacCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAAc                                                                                                >  6:289159/1‑149 (MQ=255)                                                      acCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAAcgc                                                                                              <  2:73701/149‑1 (MQ=255)                                                        cTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAg                                                                                                       >  6:293869/1‑138 (MQ=255)                                                        cTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAg                                                                                                       <  5:293869/138‑1 (MQ=255)                                                        cTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACgcgc                                                                                            >  1:87382/1‑149 (MQ=255)                                                        cTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACgcgc                                                                                            >  1:82102/1‑149 (MQ=255)                                                          ggCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGtgc                                                                                                                                                    >  5:170624‑M2/1‑89 (MQ=255)                                                          ggCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGtgc                                                                                                                                                    <  6:170624‑M2/92‑4 (MQ=255)                                                          ggCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACgcgc                                                                                            >  1:251158/1‑147 (MQ=255)                                                           gcgcACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCa                                                                                          <  3:233001/148‑1 (MQ=255)                                                             gcACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGATAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGcc                                                                                       >  1:270633/1‑149 (MQ=255)                                                                   ccTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTgcgc                                                                                  >  1:10930/1‑148 (MQ=255)                                                                      gAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCGGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCaa                                                                                >  5:326810/1‑147 (MQ=255)                                                                       aaGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAaga                                                                              <  3:170124/148‑1 (MQ=255)                                                                          aCGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTgc                                                                                    >  5:249138/1‑139 (MQ=255)                                                                          aCGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTgc                                                                                    <  6:249138/139‑1 (MQ=255)                                                                             ccgcTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCt                                                                       >  8:345647/1‑149 (MQ=255)                                                                             ccgcTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCt                                                                       <  7:345647/149‑1 (MQ=255)                                                                                   gCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTAc                                                                  <  2:251158/148‑1 (MQ=255)                                                                                    cGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGc                                                                <  6:326810/149‑1 (MQ=255)                                                                                     ggTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTGCCAGCTGCAACGCGCCAGCCTg                                                                                     >  2:136991/1‑127 (MQ=255)                                                                                     ggTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTGCCAGCTGCAACGCGCCAGCCTg                                                                                     <  1:136991/127‑1 (MQ=255)                                                                                      gTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCca                                                              >  8:277770/1‑149 (MQ=255)                                                                                         ctgcAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCcaca                                                            <  7:139017/148‑1 (MQ=255)                                                                                         ctgcAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCcaca                                                            <  8:286970/148‑1 (MQ=255)                                                                                            cAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGc                                                          <  2:10289/147‑1 (MQ=255)                                                                                             aGGGGGGGGGTGAAAGCTTGCTGCAGCGCAGCGGGGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTa                                                       <  2:82102/149‑1 (MQ=255)                                                                                             aGGGCGTGGGGGAATGCTTGCAGCAGGGCTGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTa                                                       <  2:87382/149‑1 (MQ=255)                                                                                                  gTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTATtgct                                                  <  2:172336/149‑1 (MQ=255)                                                                                                       tGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTATTGCTGCgg                                              >  4:148620/1‑148 (MQ=255)                                                                                                       tGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTATTGCTGCgg                                              <  3:148620/148‑1 (MQ=255)                                                                                                       tGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTATTGCTGCGGc                                             >  2:375778/1‑149 (MQ=255)                                                                                                       tGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTATTGCTGCGGc                                             >  3:62508/1‑149 (MQ=255)                                                                                                        gAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTATTGCTGCGGcc                                            >  1:202976/1‑149 (MQ=255)                                                                                                         acaGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTATTGCTGCGGCCg                                           <  4:110785/147‑1 (MQ=255)                                                                                                         aaaGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTATTGCTGCGGCCg                                           <  2:10930/149‑1 (MQ=255)                                                                                                              ttGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGtgctgcaagctttcacccacgccctgcagcaccgccagcggcgtcttcaggctgtgcgccaggtcgtccagcgaatcacggtagcgcgtgcgctgctcacgctcactgcgc                                        <  7:316090‑M2/148‑112 (MQ=255)                                                                                                              ttGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGtgctgcaagctttcacccacgccctgcagcaccgccagcggcgtcttcaggctgtgcgccaggtcgtccagcgaatcacggtagcgcgtgcgctgctcacgctcact                                            <  5:278907‑M2/144‑108 (MQ=255)                                                                                                              ttGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGtgctgcaagctttcacccacgccctgcagcaccgccagcggcgtcttcaggctgtgcgccaggtcgtccagcgaatcacggtagcgcgtgcgctgctcacgctcact                                            >  6:278907‑M2/1‑37 (MQ=255)                                                                                                               tGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTATTGCTGCGGCCGTTGCTc                                     >  7:28976/1‑149 (MQ=255)                                                                                                                gcagcaGCGCAGCGGCGAGCGCGAGCAGGCGCGGGtgctgcaagctttcacccacgccctgcagcaccgccagcggcgtcttcaggctgtgcgccaggtcgtccagcgaatcacggtagcgcgtgcgctgctcacgctcactgcgcaa                                      <  4:70042‑M2/148‑114 (MQ=255)                                                                                                                    cagcgcagcgGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTATTGCTGCGGCCGTTGc                                       <  7:203186/142‑1 (MQ=255)                                                                                                                    cagcgcagcgGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTATTGCTGCGGCCGTTGc                                       >  8:203186/1‑142 (MQ=255)                                                                                                                         cagcgGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTATTGCTGCGGCCGTTGCTCGACAGCCtgt                           <  4:62508/149‑1 (MQ=255)                                                                                                                           gcggcgAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTATTGCTGCGGCCGTTGCTCGACAGCCTGTgc                         <  1:326515/149‑1 (MQ=255)                                                                                                                              gcgagcgcgagcAGGCGCGGGTGCTGCAAAGCCAGATCAAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTATTGCTGCGGCCGTTGCTCGACAGCCTGTgcag                       >  6:1085/1‑148 (MQ=255)                                                                                                                                   cgcgagcAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTATTGCTGCGGCCGTTGCTCGACAGCCTGTGCAGCACCtt                 <  2:270633/149‑1 (MQ=255)                                                                                                                                   cgcgagcAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTATTGCTGCGGCCGTTGCTCGACAGCCTGTGCAGCACCtt                 <  5:289159/149‑1 (MQ=255)                                                                                                                                    gcgagcAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTATTGCTGCGGCCGTTGCTCGACAGCCTGTGCAGCACCTTg                <  8:28976/149‑1 (MQ=255)                                                                                                                                      gagcAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTATTGCTGCGGCCGTTGCTCGACAGCCTGTGCAGCACCTTGGc              >  1:210249/1‑149 (MQ=255)                                                                                                                                            gcgcGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTATTGCTGCGGCCGTTGCTCGACAGCCTGTGCAGCACCTTGGCCAAGGt        <  1:18104/149‑1 (MQ=255)                                                                                                                                            gcgcGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTATTGCTGCGGCCGTTGCTCGACAGCCTGTGCAGCACCTTGGCCAAGGt        <  2:202976/149‑1 (MQ=255)                                                                                                                                              gcgGGTGCTGCAAAGCCAGATCGAGCGCAATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTATTGCTGCGGCCGTTGCTCGACAGCCTGTGCAGCACCTTGGCCAAGGtt       >  1:216319/1‑149 (MQ=255)                                                                                                                                              gcgGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTATTGCTGCGGCCGTTGCTCGACAGCCTGTGCAGCACCTTGGCCAAGGtt       >  1:116090/1‑148 (MQ=255)                                                                                                                                                  gTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTATTGCTGCGGCCGTTGCTCGACAGCCTGTGCAGCACCTTGGCCAAGGTTTACCg  >  5:14566/1‑149 (MQ=255)                                                                                                                                                  gTGCTGCAAAGCCAGATCAAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTATTGCTGCGGCCGTTGCTCGACAGCCTGTGCAGCACCTTGGCCAAGGTTTACCg  <  5:1085/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                      TCTGTTGCGCAGTGAGCGTGAGCAGCGCACGCGCTACCGTGATTCGCTGGACGACCTGGCGCACAGCCTGAAGACGCCGCTGGCGGTGCTGCAGGGCGTGGGTGAAAGCTTGCAGCAGCGCAGCGGCGAGCGCGAGCAGGCGCGGGTGCTGCAAAGCCAGATCGAGCGC‑ATGAGCCAGCAGATCGACTACCAGCTGCAACGCGCCAGCCTGCGCAAGAGTGGCCTGGTACGCCACAGCGTATTGCTGCGGCCGTTGCTCGACAGCCTGTGCAGCACCTTGGCCAAGGTTTACCG  >  NC_002947/1362291‑1362584

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.