New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1850759 =59 (1.000)5 (0.090) 5/238 NT 8.0% coding (1300/1359 nt) rlmD 23S rRNA (uracil(1939)‑C(5))‑methyltransferase RlmD
?NC_002947 1850792 = 60 (1.090)coding (1333/1359 nt) rlmD 23S rRNA (uracil(1939)‑C(5))‑methyltransferase RlmD

AAGGCCAGAAGGCTGGTCTACGTATCGTGCAACCCGGCCACGCTGGCGAGAGACGCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGGTGTGCTGCATGGAAAGGTAAAACAAAGATGGTACAGGTGAGAGTGCACCAGC  >  NC_002947/1850657‑1850939
                                                                                                                                       |                                                                                                                                                   
aaGGCCAGAAGGCTGGTCTACGTATCGTGCAACCCGGCCACGCTTGCGAGAGACGCCCAAGTGCTGGTCGGCCAGGGGTACAGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTAtt                                                                                                                                        >  1:269136/1‑149 (MQ=255)
   gCCAGAAGGCTGGTCTACGTATCGTGCAACCCGGCCACGCTGGCGAGAGACGCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCg                                                                                                                                      >  8:61181/1‑148 (MQ=255)
          ggCTGGTCTACGTATCGTGCAACCCGGCCACGCTGGCGAGAGACGCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGc                                                                                                                              >  1:341629/1‑149 (MQ=255)
           gCTGGTCTACGTATCGTGCAACCCGGCCACGCTGGCGAGAGACGCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGc                                                                                                                              >  3:335393/1‑148 (MQ=255)
             tGGTCTACGTATCGTGCAACCCGGCCACGCTGGCGAGAGACGCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGc                                                                                                                              >  1:12451/1‑146 (MQ=255)
             tGGTCTACGTATCGTGCAACCCGGCCACGCTGGCGAGAGACGCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGc                                                                                                                              <  2:12451/146‑1 (MQ=255)
                 cTACGTATCGTGCAACCCGGCCACGCTGGCGAGAGACGCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTAtt                                                                                                                                        >  6:85706/1‑132 (MQ=255)
                 cTACGTATCGTGCAACCCGGCCACGCTGGCGAGAGACGCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTAtt                                                                                                                                        <  5:85706/132‑1 (MQ=255)
                    cGTTTCGTGCAACCCGGCCACGCTGGCGAGAGTCGCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACt                                                                                                                     <  1:264078/148‑1 (MQ=255)
                    cGTATCGTGCAACCCGGCCACGCTGGCGAGAGACGCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTg                                                                                                                    <  5:14235/149‑1 (MQ=255)
                      tATCGTGCAACCCGGCCACGCTGGCGAGAGACGCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGc                                                                                                                  >  1:104760/1‑149 (MQ=255)
                      tATCGTGCAACCCGGCCACGCTGGCGAGAGACGCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGc                                                                                                                  <  3:134934/149‑1 (MQ=255)
                       aTCGTGCAACCCGGCCACGCTGGCGAGAGACGCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGcc                                                                                                                 >  6:334917/1‑149 (MQ=255)
                        tCGTGCAACCCGGCCACGCTGGCGAGAGACGCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGcc                                                                                                                 <  2:513/148‑1 (MQ=255)
                          gTGCAACCCGGCCACGCTGGCGAGAGACGCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCt                                                                                                              >  6:356431/1‑149 (MQ=255)
                             cAACCCGGCCACGCTGGCGAGAGACGCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTgg                                                                                                           <  6:49650/149‑1 (MQ=255)
                               gtgcggccgcccttccgtggcaaccgcaccaaggggccagtcagctagcccgcttcgaataacgccatggcCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATg                                                                                                                                                >  5:298359‑M1/72‑110 (MQ=255)
                               gtgcggccgcccttccgtggcaaccgcaccaaggggccagtcagctagcccgcttcgaataacgccatggcCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATg                                                                                                                                                <  6:298359‑M1/39‑1 (MQ=255)
                                  cGGCCACGCTGGCGAGAGACGCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCgg                                                                                                      >  3:41714/1‑149 (MQ=255)
                                  cGGCCACGCTGGCGAGAGACGCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCgg                                                                                                      >  3:36811/1‑149 (MQ=255)
                                      cACGCTGGCGAGAGACGCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGc                                                                                                  <  4:41714/149‑1 (MQ=255)
                                      cACGCTGGCGAGAGACGCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGc                                                                                                  <  4:36811/149‑1 (MQ=255)
                                         gCTGGCGAGAGACGCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCAc                                                                                               <  2:341629/149‑1 (MQ=255)
                                          cTGGCGAGAGACGCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACg                                                                                              <  5:334917/149‑1 (MQ=255)
                                             gCGAGAGACGCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACgg                                                                                             >  3:147953/1‑147 (MQ=255)
                                               gtggcaaccgcaccaaggggccagtcagctagcccgcttcgaataacgccatggcCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGc                                                                                                                                                    >  4:359204‑M1/56‑90 (MQ=255)
                                               gtggcaaccgcaccaaggggccagtcagctagcccgcttcgaataacgccatggcCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGc                                                                                                                                                    <  3:359204‑M1/35‑1 (MQ=255)
                                               gagagaCGCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAgg                                                                                         <  1:171926/149‑1 (MQ=255)
                                                    aCGCCCAAGTGCTTGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGggcggc                                                                                    >  3:227698/1‑149 (MQ=255)
                                                    aCGCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGggcggc                                                                                    >  4:273136/1‑149 (MQ=255)
                                                      gCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCgg                                                                                                      >  2:367204/1‑129 (MQ=255)
                                                      gCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCgg                                                                                                      <  1:367204/129‑1 (MQ=255)
                                                        ccAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCa                                                                                >  2:345780/1‑149 (MQ=255)
                                                        ccAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCa                                                                                >  7:229138/1‑149 (MQ=255)
                                                          aaGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGggcgg                                                                                     >  3:122240/1‑142 (MQ=255)
                                                          aaGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGggcgg                                                                                     <  4:122240/142‑1 (MQ=255)
                                                          aaGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACg                                                                              <  5:356431/149‑1 (MQ=255)
                                                          aaGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACg                                                                              <  3:273136/149‑1 (MQ=255)
                                                             tGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGt                                                                            >  7:144080/1‑148 (MQ=255)
                                                                    cGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCa                                                                    <  8:131994/149‑1 (MQ=255)
                                                                     ggCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCa                                                                    <  4:227698/148‑1 (MQ=255)
                                                                       ccAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGtt                                                                                                    <  6:158215/114‑1 (MQ=255)
                                                                       ccAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGtt                                                                                                    >  5:158215/1‑114 (MQ=255)
                                                                       ccAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCa                                                                    >  3:133129/1‑146 (MQ=255)
                                                                       ccAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCa                                                                    <  4:133129/146‑1 (MQ=255)
                                                                               aCCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTa                                                         >  7:212424/1‑149 (MQ=255)
                                                                                ccGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTAt                                                        >  6:313929/1‑149 (MQ=255)
                                                                                ccGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTAt                                                        >  7:292433/1‑149 (MQ=255)
                                                                                 cGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATg                                                       <  4:335393/149‑1 (MQ=255)
                                                                                   gTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGgt                                                     <  7:61181/149‑1 (MQ=255)
                                                                                    ttAAAAAGGGCCGGGATTCTCGACATGTTTCCTAAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGgtg                                                    >  3:155250/1‑149 (MQ=255)
                                                                                             gCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGGTGTGCTGCATg                                           <  3:332904/149‑1 (MQ=255)
                                                                                                gggATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGGTGTGCTGCATGGaa                                        <  4:147953/149‑1 (MQ=255)
                                                                                                catggcctcgacatgcgccgtctgaggaaacatgtcgagGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCAc                                                                               <  6:298359‑M2/71‑1 (MQ=255)
                                                                                                catggcctcgacatgcgccgtctgaggaaacatgtcgagGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCAc                                                                               >  5:298359‑M2/40‑110 (MQ=255)
                                                                                                  gATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGGTGTGCTGCATGGAAAg                                      <  2:104760/149‑1 (MQ=255)
                                                                                                  gATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGGTGTGCTGCATGGAAAg                                      <  8:229138/149‑1 (MQ=255)
                                                                                                    gcctcgacatgcgccgtctgaggaaacatgtcgagGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCAc                                                                                               <  3:359204‑M2/55‑1 (MQ=255)
                                                                                                    gcctcgacatgcgccgtctgaggaaacatgtcgagGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCAc                                                                                               >  4:359204‑M2/36‑90 (MQ=255)
                                                                                                     tctcGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGGTGTGCTGCATGGa                                         >  6:234069/1‑143 (MQ=255)
                                                                                                     tctcGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGGTGTGCTGCATGGa                                         <  5:234069/143‑1 (MQ=255)
                                                                                                      ctcgacatgcgccgtctgaggaaacatgtcgagGCCATGGCGTTATTCGAAGAGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGGTGTGCTGCATGGAAAGGTa                                   >  8:258162‑M2/34‑148 (MQ=255)
                                                                                                         GACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCAACGGAAGTGCGGCCGCACGGTGATCGCCAGCACACTCGTATGGTGTGCTGCATGGAAAGGTaaaa                                >  5:267596‑M1/1‑148 (MQ=255)
                                                                                                          ACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGGTGTGCTGCATGGAAAGGTAAAAc                               <  3:373066‑M1/148‑1 (MQ=255)
                                                                                                               tttCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGGTGTGCTGCATGGAAAGGTAAAACAAAGAt                         >  5:74238/1‑149 (MQ=255)
                                                                                                               tttCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGGTGTGCTGCATGGAAAGGTAAAACAAAGAt                         >  2:93959/1‑149 (MQ=255)
                                                                                                                  ccTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGGTGTGCTGCATGGAAAGGTAAAACAAAGATGGt                      >  8:255164/1‑149 (MQ=255)
                                                                                                                   cTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACgg                                                                             <  3:153704/93‑1 (MQ=255)
                                                                                                                   cTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACgg                                                                             >  4:153704/1‑93 (MQ=255)
                                                                                                                   cTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGgt                                                     <  4:363071/117‑1 (MQ=255)
                                                                                                                   cTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGgt                                                     >  3:363071/1‑117 (MQ=255)
                                                                                                                          ggCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGGTGTGCTGCATGGAAAGGTAAAACAAAGATGGTACAGGTga              >  4:304445/1‑149 (MQ=255)
                                                                                                                           gcgcATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGGTGTGCTGCATGGAAAGGTAAAACAAAGATGGTACAGGt                >  1:196356/1‑146 (MQ=255)
                                                                                                                            cgcATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGGTGTGCTGCATGGAAAGGTAAAACAAAGATGGTACAGGTgaga            <  1:345780/149‑1 (MQ=255)
                                                                                                                            cgcATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGGTGTGCTGCATGGAAAGGTAAAACAAAGATGGTACAGGTgaga            <  4:119577/149‑1 (MQ=255)
                                                                                                                             gcATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGGTGTGCTGCATGGAAAGGTAAAACAAAGATgg                       <  6:57295/137‑1 (MQ=255)
                                                                                                                             gcATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGGTGTGCTGCATGGAAAGGTAAAACAAAGATgg                       >  5:57295/1‑137 (MQ=255)
                                                                                                                               atgtcgagGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGGTGTGCTGCATGGAAAGGTAAAACAAAGATGGTACAGGTGAGAGTg         <  5:313929‑M2/141‑1 (MQ=255)
                                                                                                                                    gagGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGGTGTGCTGCATGGAAAGGTAAAACAAAGATGGTACAGGTGAGAGTGCAcc     <  4:373066‑M2/145‑1 (MQ=255)
                                                                                                                                    gagGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGGTGTGCTGCATGGAAAGGTAAAACAAAGATGGTACAGGTGAGAGTGCAc      >  5:12775‑M2/4‑147 (MQ=255)
                                                                                                                                    gagGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGGTGTGCTGCATGGAAAGGTAAAACAAAGATGGTACAGGTGAGAGTGCAc      >  8:7734‑M2/4‑147 (MQ=255)
                                                                                                                                      gGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGGTGTGCTGCATGGAAAGGTAAAACAAAGATGGTACAGGTGAGAGTGCACCAGc  <  8:144080‑M2/148‑1 (MQ=255)
                                                                                                                                       |                                                                                                                                                   
AAGGCCAGAAGGCTGGTCTACGTATCGTGCAACCCGGCCACGCTGGCGAGAGACGCCCAAGTGCTGGTCGGCCAGGGGTACCGGTTAAAAAGGGCCGGGATTCTCGACATGTTTCCTCAGACGGCGCATGTCGAGGCCATGGCGTTATTCGAAGCGGGCTAGCTGACTGGCCCCTTGGTGCGGTTGCCACGGAAGGGCGGCCGCACGGTGATCGCCAGCACACTCGTATGGTGTGCTGCATGGAAAGGTAAAACAAAGATGGTACAGGTGAGAGTGCACCAGC  >  NC_002947/1850657‑1850939

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.