| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2032810 = | NA (NA) | 5 (0.090) | 5/244 | NT | 20.0% | coding (291/1665 nt) | pgi‑I | glucose 6‑phosphate isomerase |
| ? | NC_002947 | 2032835 = | 21 (0.360) | coding (316/1665 nt) | pgi‑I | glucose 6‑phosphate isomerase | |||||
CTCAAAAAACCTGATCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCT‑GCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACTGGTTGGTCGCATTCACGATGGCCTGTGGCGCGGCTACAGC > NC_002947/2032687‑2032957 | ctCAAAAAACCTGATCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCT‑GCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGcc > 6:110269/1‑149 (MQ=34) tgtagccgcgccacaggccatcgtgaatgcgaccaaccagttcggtaatctggttgagcaccttgtgcacttccggcatgacgttcacgccgttgacgctgagtttgtcacctacaggccggcgcaaggcggtgtgcagcaccggaCgg > 1:327274‑M2/147‑149 (MQ=255) tgtagccgcgccacaggccatcgtgaatgcgaccaaccagttcggtaatctggttgagcaccttgtgcacttccggcatgacgttcacgccgttgacgctgagtttgtcacctacaggccggcgcaaggcggtgtgcagcaccggaCgg > 6:56955‑M2/147‑149 (MQ=255) tagccgcgccacaggccatcgtgaatgcgaccaaccagttcggtaatctggttgagcaccttgtgcacttccggcatgacgttcactcgccgttgacgctgagtttgtcacctacaggccggcgcaaggcggtgtgcagcaccggaCg < 1:298593‑M2/2‑1 (MQ=255) tagccgcgccacaggccatcgtgaatgcgaccaaccagttcggtaatctggttgagcaccttgtgcacttccggcatgacgttcacgccgttgacgctgagtttgtcacctacaggccggcgcaaggcggtgtgcagcaccggaCGGc < 4:296019‑M2/4‑1 (MQ=255) aaCCTGATCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCT‑GCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGt < 7:142193/149‑1 (MQ=32) ccgcgccacaggccatcgtgaatgcgaccaaccagttcggtaatctggttgagcaccttgtgcacttccggcatgacgttcacgccgttgacgctgagtttgtcacctacaggccggcgcaaggcggtgtgcagcaccggaCGGcc < 6:57344‑M2/5‑1 (MQ=255) ccgcgccacaggccatcgtgaatgcgaccaaccagttcggtaatctggttgagcaccttgtgcacttccggcatgacgttcacgccgttgacgctgagtttgtcacctacaggccggcgcaaggcggtgtgcagcaccggaCGGcc > 5:57344‑M2/142‑146 (MQ=255) aTCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCT‑GCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGa < 7:227537/149‑1 (MQ=32) aTCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCT‑GCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGa < 5:26646/149‑1 (MQ=32) cACCGAGCAAAGCCGCGATCTGCTGGTCACCCTGGCCAATGAAGTGGGCCT‑GCAGGACGCCATCAAGTCGCTGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGGGCTGCACACCGCCTTGCGCCGGCCTGTAGGTgcc > 3:220481/1‑146 (MQ=12) cACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCT‑GCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGGGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGAc > 3:215617/1‑148 (MQ=17) aCCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCT‑GCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGACTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACa > 1:63873/1‑148 (MQ=17) aCCGAGCAAAGCCGCGATCTGCTGGTAAACCTGGCCAATGAAGTGGGCCT‑GCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACa < 5:110269/148‑1 (MQ=17) ccGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCT‑GCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACaaa > 2:300700/1‑149 (MQ=32) aaGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCT‑GCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCg > 3:313843/1‑149 (MQ=32) ccGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCC‑GCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTc > 5:339679/1‑148 (MQ=17) aatgcgaccaaccagttcggtaatctggttgagcaccttgtgcacttccggcatgacgttcacgccgttgacgctgagtttgtcacctacaggccggcgcaaggcggtgtgcagcaccggaCGGc > 3:34476‑M2/122‑125 (MQ=255) aatgcgaccaaccagttcggtaatctggttgagcaccttgtgcacttccggcatgacgttcacgccgttgacgctgagtttgtcacctacaggccggcgcaaggcggtgtgcagcaccggaCGGc < 4:34476‑M2/4‑1 (MQ=255) gcgATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCT‑GCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAAc > 5:56955/1‑149 (MQ=32) gcgATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCT‑GCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCATCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAAc > 8:99887/1‑149 (MQ=17) tCTGCTGGTCAACCTGGCCAATGAAGTGGGCCT‑GCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCg > 4:368692/1‑149 (MQ=32) gaccagccagttcggtaatctggttgagcaccttgtgcacttccggcatgacgttcacgccgttgacgctgagtttgtcacctacaggccggcgcaaggcggtgtgcagcaccggaCg > 4:288419‑M2/117‑118 (MQ=255) ctgctgGTCAACCTGGCCAATGAAGTGGGCCT‑GCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGt > 4:188864/1‑149 (MQ=32) gctgGTCAACCTGGCCAATGAAGTGGGCCT‑GCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTg > 7:56194/1‑148 (MQ=32) ctgGTCAACCTGGCCAATGAAGTGGGCCT‑GCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGt < 3:159818/146‑1 (MQ=32) cggTCAACCTGGCCAATGAAGTGGGCCTAGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGaa > 1:23470/2‑149 (MQ=17) aaCCTGGCCAATGAAGTGGGCCT‑GCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAAc > 4:256403/1‑135 (MQ=32) aaCCTGGCCAATGAAGTGGGCCT‑GCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAAc < 3:256403/135‑1 (MQ=32) aaCCTGGCCAATGAAGTGGGCCT‑GCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCCGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCAt > 8:262927/1‑149 (MQ=17) aCCTGGCCAATGAAGTGGGCCT‑GCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATg > 1:185179/1‑149 (MQ=31) cctacaggccggcgcaaggcggtgtgcagcaccggaCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACTGGTTGGTCGCATTCACGATGGCCTGTGgcg > 7:310084‑M2/37‑149 (MQ=255) ctacaggccggcgcaaggcggtgtgtagcaccggaCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAAc < 7:263505‑M2/82‑1 (MQ=255) ctacaggccggcgcaaggcggtgtgtagcaccggaCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAAc > 8:263505‑M2/36‑117 (MQ=255) tacaggccggcgcaaggcggtgtgcagcaccggaCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACTGGTTGGTCGCATTCACGATGGCCTGTGGcgcg > 1:269547‑M2/35‑149 (MQ=255) ggcgcaaggcggtgtgcagcaccggaCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACTGGTTGGTCGCATTCACGATGGCCTGTGGCGCGGCTACAGc < 2:269547‑M2/123‑1 (MQ=255) | CTCAAAAAACCTGATCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCT‑GCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACTGGTTGGTCGCATTCACGATGGCCTGTGGCGCGGCTACAGC > NC_002947/2032687‑2032957 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |