New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3649389	69 (1.170)	6 (0.110)	5/244	NT	8.5%	intergenic (+866/+825)	PP_3214/PP_3216	hypothetical protein/cysteine dioxygenase
	?	NC_002947	= 3649415	64 (1.140)					intergenic (+892/+799)	PP_3214/PP_3216	hypothetical protein/cysteine dioxygenase

AGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAGCGGCGGTCCTGACCATGAGCCAGTTGCTGCCCCGCCAGGGTCCAGCCGATGGTGC  >  NC_002947/3649267‑3649562                                                                                                                                                     |                                                                                                                                                     aGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGa                                                                                                                                                      <  1:209580/149‑1 (MQ=255)           tgCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTg                                                                                                                                             >  1:305499/1‑148 (MQ=255)           tgCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTg                                                                                                                                             >  4:234280/1‑148 (MQ=255)             ccagccaCGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCAGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑t                                                                                                                                         >  3:153374/1‑149 (MQ=255)                   aCGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCg                                                                                                                                   <  5:292089/149‑1 (MQ=255)                   aCGAGGCGCTCATGGTGGCGCGCACGCCAGCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGCACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCg                                                                                                                                   <  6:246459/149‑1 (MQ=255)                    cGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCgg                                                                                                                                  <  4:209326/149‑1 (MQ=255)                    cGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCgg                                                                                                                                  <  5:164779/149‑1 (MQ=255)                      aGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTc                                                                                                                                <  6:176625/149‑1 (MQ=255)                            tCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTAcgc                                                                                                                          >  7:352114/1‑149 (MQ=255)                                       cgcACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTAcc                                                                                                               <  6:344270/149‑1 (MQ=255)                                        gcACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCg                                                                                                              >  3:190863/1‑149 (MQ=255)                                        gcACGCCATCGTCCTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCAGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCg                                                                                                              >  6:179488/1‑149 (MQ=255)                                            gCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCg                                                                                                          >  3:303321/1‑149 (MQ=255)                                             ccATCGTCGTCCACCAGCGCGATGTGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCgg                                                                                                         <  5:257221/149‑1 (MQ=255)                                              cATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCggg                                                                                                        >  5:186367/1‑149 (MQ=255)                                              cATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCggg                                                                                                        >  4:206268/1‑149 (MQ=255)                                              cATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGAGGTCGGTCTCTTGAACGAGTGGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTCTA‑TTCCTCGGTCGTAcgcg                                                                                                                         >  5:264363/1‑132 (MQ=255)                                                tcgtcgTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGcc                                                                                                      >  5:256013/1‑149 (MQ=255)                                                tcgtcgTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGcc                                                                                                      >  5:116403/1‑149 (MQ=255)                                                  gtcgtcCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTg                                                                                                    <  7:127176/149‑1 (MQ=255)                                                     gtcCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCggc                                                                                                        <  4:182490/142‑2 (MQ=255)                                                     gtcCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCggc                                                                                                        >  3:182490/1‑141 (MQ=255)                                                     gtcCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGc                                                                                                  <  4:303321/148‑1 (MQ=255)                                                        caccaGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCcgg                                                                                               <  6:302995/148‑1 (MQ=255)                                                          ccaGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCcggcgg                                                                                            >  6:94551/1‑149 (MQ=255)                                                            aGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCGGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGgcggcg                                                                                          <  4:153374/149‑1 (MQ=255)                                                             gcgcGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCGCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGGCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGt                                                                                         <  5:383187/149‑1 (MQ=255)                                                               gcgATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTg                                                                                       <  8:352114/149‑1 (MQ=255)                                                                cgATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTgg                                                                                      >  7:265116/1‑149 (MQ=255)                                                                     cgcgcCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCgg                                                                                 <  6:109716/149‑1 (MQ=255)                                                                      gcgcCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCt                                                                                                                                              >  8:236107/1‑88 (MQ=255)                                                                      gcgcCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCt                                                                                                                                              <  7:236107/88‑1 (MQ=255)                                                                       cgcCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCggg                                                                                >  5:70735/1‑148 (MQ=255)                                                                           ccGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAAcc                                                                           >  6:338248/1‑149 (MQ=255)                                                                                cacaCTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGt                                                                      <  4:190863/149‑1 (MQ=255)                                                                                     tGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCt                                                                 >  7:304845/1‑149 (MQ=255)                                                                                       gCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCg                                                               >  7:107635/1‑149 (MQ=255)                                                                                                tcggtcTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAgcgg                                                      <  4:347463/149‑1 (MQ=255)                                                                                                  ggtcTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAgcggcg                                                    <  5:338248/149‑1 (MQ=255)                                                                                                  ggtcTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAgcggc                                                     <  2:305499/148‑1 (MQ=255)                                                                                                  ggtcTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAgcggc                                                     <  8:107635/148‑1 (MQ=255)                                                                                                  ggtcTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAgcggc                                                     <  6:186367/148‑1 (MQ=255)                                                                                                      tctTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAGCGGCGGTcc                                                >  2:305364/1‑149 (MQ=255)                                                                                                       ctTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGAcc                                                                  >  6:138774/1‑130 (MQ=255)                                                                                                       ctTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGAcc                                                                  <  5:138774/130‑1 (MQ=255)                                                                                                        ttGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAGCGGCGGTc                                                 <  6:70735/146‑1 (MQ=255)                                                                                                        ttGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAGCGGCGGTCCt                                               >  8:54978/1‑148 (MQ=255)                                                                                                        ttGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAGCGGCGGTCCTg                                              >  5:297565/1‑149 (MQ=255)                                                                                                        ttGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAGCGGCGGTCCTg                                              >  1:257938/1‑149 (MQ=255)                                                                                                         tGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAGcggcgg                                                   <  4:200020/143‑1 (MQ=255)                                                                                                         tGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAGcggcgg                                                   >  3:200020/1‑143 (MQ=255)                                                                                                          gAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGCCCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAGCGGCGGCCCTgcg                                            >  5:230764/1‑147 (MQ=255)                                                                                                          gAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGTCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAGCGGCGGTCCt                                               <  1:294771/146‑1 (MQ=255)                                                                                                           aaCCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTAGTTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAGCGGCGGTCCTGAc                                            >  1:289514/1‑149 (MQ=255)                                                                                                           aaCCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAGCGGCGGTCCTgcc                                            >  6:104846/1‑146 (MQ=255)                                                                                                            aCCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAGCGGCGGTCCTGACCa                                          >  1:249247/1‑149 (MQ=255)                                                                                                              cAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGAccggcgggcaactggttcaagagaccgaccacgtcgccagtgtgcgcggggcgcgcatcgcgctggtggacgacgatggcgtgcgcgccaacatgagcgcctcgtggct                                         <  1:333899‑M2/149‑110 (MQ=255)                                                                                                               aGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAGCGGCGGTCCTGACCATGa                                       <  8:304845/149‑1 (MQ=255)                                                                                                                    cccGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAGCGGCGGTCCTGACCATGAGCCAg                                  >  1:306905/1‑149 (MQ=255)                                                                                                                     ccgccgGGCACCGGGCGGCTGCCCGGCAGATGAccggcgggcaactggttcaagagaccgaccacgtcgccagtgtgcgcggggcgcgcatcgcgctggtggacgacgatggcgtgcgcgccaacatgagcgcctcgtggctggca                                     <  5:295794‑M2/146‑114 (MQ=255)                                                                                                                     ccgccgGGCACCGGGCGGCTGCCCGGCAGATGAccggcgggcaactggttcaagagaccgaccacgtcgccagtgtgcgcggggcgcgcatcgcgctggtggacgacgatggcgtgcgcgccaacatgagcgcctcgtggct                                         >  7:69197‑M2/1‑33 (MQ=255)                                                                                                                     ccgccgGGCACCGGGCGGCTGCCCGGCAGATGAccggcgggcaactggttcaagagaccgaccacgtcgccagtgtgcgcggggcgcgcatcgcgctggtggacgacgatggcgtgcgcgccaacatgagcgcctcgtggct                                         <  8:69197‑M2/142‑110 (MQ=255)                                                                                                                     ccgccgGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAgcgg                                                      <  7:124291/128‑1 (MQ=255)                                                                                                                     ccgccgGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAgcgg                                                      >  8:124291/1‑128 (MQ=255)                                                                                                                      cgccgGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAGCGGCGGTCCTGACCATGAGCCAGtt                                <  6:116403/149‑1 (MQ=255)                                                                                                                       gccgGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAGCGGCGGTCCTGACCATGAGCCAGTtg                               <  8:265116/149‑1 (MQ=255)                                                                                                                         cgGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAGCGGCGGTCCTGACCATGAGCCAGTtgct                             <  5:94551/149‑1 (MQ=255)                                                                                                                                cGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCg                                                               >  2:318001/1‑108 (MQ=255)                                                                                                                                cGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCg                                                               <  1:318001/108‑1 (MQ=255)                                                                                                                                cGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAGCGGCGGTCCTGACCATGAGCCAGTTGCTGCCCCGc                      >  5:302224/1‑149 (MQ=255)                                                                                                                                 gggCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAGCGGCGGTCCTGACCATGAGCCAGTTGCTGCCCCGcc                     <  2:306905/149‑1 (MQ=255)                                                                                                                                  ggcggcTGCCCGGCAGATGAccggcgggcaactggttcaagagaccgaccacgtcgccagtgtgcgcggggcgcgcatcgcgctggtggacgacgatggcgtgcgcgccaacatgagcgcctcgtggctggcacagatgggctggcagg                     >  6:295794‑M2/1‑20 (MQ=255)                                                                                                                                       cTGCCCGGCAGATGAccggcgggcaactggttcaagagaccgaccacgtcgccagtgtgcgcggggcgcgcatcgcgctggtggacgacgatggcgtgcgcgccaacatgagcgcctcgtggctggcacagatgggctggcaggtcgct                >  2:333899‑M2/1‑15 (MQ=255)                                                                                                                                                aGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCgg                                                              >  2:81801/1‑93 (MQ=255)                                                                                                                                                     aCCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAGCGGCGGTCCTGACCATGAGCCAGTTGCTGCCCCGCCAGGGTCCAGCCGATGGTGc  <  7:255235/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     AGCCCATCTGTGCCAGCCACGAGGCGCTCATGTTGGCGCGCACGCCATCGTCGTCCACCAGCGCGATGCGCGCCCCGCGCACACTGGCGACGTGGTCGGTCTCTTGAACCAGTTGCCCGCCGGGCACCGGGCGGCTGCCCGGCAGATGACCGGCGCTGTA‑TTCCTCGGTCGTACGCGGTCTGCTACCGCCCGGGCCTGGCCGGCGGCGTTGGCGCGGGTAACCGCGGTGACCTCGGCAAAGCGGCGGTCCTGACCATGAGCCAGTTGCTGCCCCGCCAGGGTCCAGCCGATGGTGC  >  NC_002947/3649267‑3649562

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.