New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4062012 =	56 (0.950)	3 (0.050)	3/242	NT	5.5%	coding (64/306 nt)	PP_3580	hypothetical protein
	?	NC_002947	4062056 =	51 (0.910)					coding (108/306 nt)	PP_3580	hypothetical protein

CTAGCAGGTGCTATCTTTAGTTTCCCGGCGGCCGCATCGATGTGGCCACCCGCTCATCACGTCCAGGTACGGACAAGGAGGCTGGCATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCGGGTATCCCCTGTGCAGCGATCATGGCCGCCGCCGATGTAGAGCGCATCATCGAGGCCGTCGAGG  >  NC_002947/4061908‑4062204                                                                                                                                                         |                                                                                                                                                       cTAGCAGGTGCTATCTTTAGTTTCCCGGCGGCCGCATCGATGTGGCCACCCGCTCATCACGTCCAGGTACGGACAAGGAGGCTGGCATGACCAAGATGACGTTC‑‑‑‑CCCAACGCCTGCGAGGTGATGCGCTGGCAGTGCCCTCCGTTGGGc                                                                                                                                                        >  2:147571/1‑149 (MQ=255)       gctgcacaggggatacccgcaatcgccagcagggtttcaccgctggcgcggtcgaacagccgcgcgaccatgctgcgtggcgcatccatgctggcctcgaagCCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCt                                                                                                                                                       >  2:279018‑M1/103‑148 (MQ=255)           cTATCTTTAGTTTCCCGGCGGCCGCATCGATGTGGCCACCCGCTCATCACGTCCAGGTACGGACAAGGAGGCTGGCATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGc                                                                                                                                                >  7:359572/1‑147 (MQ=255)                     tttCCCGGCGGCCGCATCGATGTGGCCACCCGCTCATCACGTCCAGGTACGGACAAGGAGGCTGGCATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑Tgc                                                                                                                                   >  1:220685/1‑149 (MQ=255)                                 cGCATCGATGTGGCCACCCGCTCATCACGTCCAGGTACGGACAAGGAGGCTGGCATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCAt                                                                                                                       >  1:265893/1‑149 (MQ=255)                                  gCATCGATGTGGCCACCCGCTCATCACGTCCAGGTACGGACAAGGAGGCTGGCATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATg                                                                                                                      >  4:174317/1‑149 (MQ=255)                                  gCATCGATGTGGCCACCCGCTCATCACGTCCAGGTACGGACAAGGAGGCTGGCATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATg                                                                                                                      >  4:168484/1‑149 (MQ=255)                                   cATCGATGTGGCCACCCGCTCATCACGTCCAGGTACGGACAAGGAGGCTGGCATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCTGTTCCATCCGTTGGGCTTCGACGCCAGCATGGA‑TGCGCCACGCAGCATgg                                                                                                                     >  2:99224/1‑149 (MQ=255)                                    aTCGATGTGGCCACCCGCTCATCACGTCCAGGTACGGACAAGGAGGCTGGCATGAACAAGATGACGTTCTGAGGCAAACGCATGCCAGGTAATGCGATGGAATTTCCATCCTTTGGGATTCGAGGCAAGAATGGA‑TGCGCCACgcagca                                                                                                                        >  1:117682/1‑149 (MQ=255)                                           tgGCCACCCGCTCATCACGTCCATGTACGGACAAGGAGGCTGGCATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCgg                                                                                                             <  3:322126/149‑1 (MQ=255)                                              ccACCCGCTCATCACGTCCAGGTACGGACAAGGAGGCTGGCATGCACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCCTTGGGCTACCAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTg                                                                                                          >  7:322893/1‑149 (MQ=255)                                               cACCCGCTCATCACGTCCAGGTACGGACAAGGAGGCTGGCATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGt                                                                                                         <  4:81745/149‑1 (MQ=255)                                               cACCCGCTCATCACGTCCAGGTACGGACAAGGAGGCTGGCATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGt                                                                                                         >  3:81745/1‑149 (MQ=255)                                                aCCCGCTCATCACGTCCAGGTACGGACAAGGAGGCTGGCATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGtt                                                                                                        >  1:115606/1‑149 (MQ=255)                                                        atcaCGTCCAGGTACGGACAAGGAGGCTGGCATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACcgcg                                                                                                >  8:406/1‑149 (MQ=255)                                                             gTCCAGGTACGGACAAGGAGGCTGGCATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATACGTTCGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGTTCGCGCGGCTGTTCGACCGCGCCAGc                                                                                           >  3:201792/1‑149 (MQ=255)                                                                cAGGTACGGACAAGTAGGCTGGCATGAACAAGATGACGGTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACTCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGt                                                                                        <  8:225769/149‑1 (MQ=255)                                                                 aGGTACGGACAAGGAGGCTGGCATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTg                                                                                       <  1:5259/149‑1 (MQ=255)                                                                     aCGGACAAGGAGGCTGGCATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCGGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGGCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAAc                                                                                  <  5:147123/149‑1 (MQ=255)                                                                      cGGACAAGGAGGCTGGCATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGATTGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAAc                                                                                  <  1:285041/149‑1 (MQ=255)                                                                      cGGACAAGGAGGCTGGCATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAAcc                                                                                 <  8:359572/149‑1 (MQ=255)                                                                               aggCTGGCATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGAc                                                                                                    >  7:260724/1‑122 (MQ=255)                                                                               aggCTGGCATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGAc                                                                                                    <  8:260724/122‑1 (MQ=255)                                                                               aggCTGGCATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCg                                                                        <  5:237620/149‑1 (MQ=255)                                                                                     gCATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGc                                                                   <  6:365315/148‑1 (MQ=255)                                                                                     gCATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCg                                                                  <  2:95692/149‑1 (MQ=255)                                                                                      cATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCgg                                                                 <  7:406/149‑1 (MQ=255)                                                                                      cATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCgg                                                                 <  3:168484/149‑1 (MQ=255)                                                                                      cATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCgg                                                                 <  3:174317/149‑1 (MQ=255)                                                                                      cATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCgg                                                                 <  2:115606/149‑1 (MQ=255)                                                                                      cATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCAATTGCgg                                                                 <  4:354927/149‑1 (MQ=255)                                                                                            cAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCGGGTATcc                                                           <  6:388923/149‑1 (MQ=255)                                                                                               gATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCgg                                                                 >  5:118216/1‑140 (MQ=255)                                                                                               gATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCgg                                                                 <  6:118216/140‑1 (MQ=255)                                                                                               gATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCGGGTATc                                                            >  2:354620/1‑145 (MQ=255)                                                                                               gATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCGGGTATc                                                            <  1:348889/145‑1 (MQ=255)                                                                                               gATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCGGGTATc                                                            <  1:354620/145‑1 (MQ=255)                                                                                               gATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCGGGTATc                                                            >  2:348889/1‑145 (MQ=255)                                                                                               gATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCGGGTATCCCCt                                                        >  8:264602/1‑149 (MQ=255)                                                                                               gATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCGGGTATCCCCt                                                        >  4:130384/1‑149 (MQ=255)                                                                                                aTGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCGGGTATCCCCt                                                        <  7:264602/148‑1 (MQ=255)                                                                                                    cGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACgc                                                                                                                            >  4:186555/1‑77 (MQ=255)                                                                                                    cGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACgc                                                                                                                            <  3:186555/77‑1 (MQ=255)                                                                                                    cGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCGGGTATCCCCtgtg                                                     >  2:346744/1‑147 (MQ=255)                                                                                                           agcccaacggatggaaatgccagcgcatcacctggcaggcgttgggCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCGGGTATCCCCTGTGCAGc                                                 >  2:279018‑M2/47‑148 (MQ=255)                                                                                                             CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCGGGTATCCCCTGTGCAGCGa                                               >  2:220685‑M1/1‑148 (MQ=255)                                                                                                              CCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCgg                                                                 >  8:7304‑M1/1‑129 (MQ=255)                                                                                                              CCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCgg                                                                 <  7:7304‑M1/129‑1 (MQ=255)                                                                                                              CCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCGGGTATCCCCTGTGCAg                                                  >  3:562‑M1/1‑144 (MQ=255)                                                                                                              CCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCGGGTATCCCCTGTGCAg                                                  <  4:562‑M1/144‑1 (MQ=255)                                                                                                               caacggatggaaatgccagcgcatcacctggcaggcgttgggCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCGGGTATCCCCTGTGCAGCGATCa                                            >  3:214509‑M2/43‑149 (MQ=255)                                                                                                                aacggatggaaatgccagcgcatcacctggcaggcgttgggCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCGGGTATCCCCTGTGCAGCGATCAt                                           <  4:214509‑M2/108‑1 (MQ=255)                                                                                                                        caaGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGAATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCGGGTATCCCCTGTGCAGCGATCATGgccgccg                                   >  1:176997/3‑149 (MQ=255)                                                                                                                         cAGGTGATGCGCTGGCATTTCCATCCGTTGCGCTTCGAGGCCAGCTTGGA‑TGCGCCACGCAGCATGGTCGCGCGTCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCGGGTATCCCCTGTGCAGCGATCATGgccgccgc                                  >  1:266611/1‑149 (MQ=255)                                                                                                                           ggTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCGGGTATCCCCTGTGCAGCGATCATGgccgccgcc                                 >  6:94328/1‑148 (MQ=255)                                                                                                                              gATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCGGGTATCCCCTGTGCAGCGATCATGGCCGCCGCCGATg                             >  5:357939/1‑149 (MQ=255)                                                                                                                               tatcccTGGGATTTTCCTGCGTTGGGCCTCGTCGCCAGCCTGGC‑AGCGGCACCGAGCATTGTGGCGCGGGTGGTTGTCCGGGGCACCGGTGTAACCCCTGCTGGCGATTGCGGGTATCCCCTGTGCAGCGATCATGGCCGCCGCCGATg                             <  1:99224/144‑1 (MQ=255)                                                                                                                               aTGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGCTTGCGGGTATCCCCTGTGCAGCGATCATGGCCGCCGCCGATg                             >  7:87003/1‑148 (MQ=255)                                                                                                                                   gcTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑aaa                                                                                   >  6:244178/1‑90 (MQ=255)                                                                                                                                   gcTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑aaa                                                                                   <  5:244178/90‑1 (MQ=255)                                                                                                                                    cTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCGGGTATCCCCTGTGCAGCGATCATGGCCGCCGCCGATGTAGAgc                       <  1:346744/149‑1 (MQ=255)                                                                                                                                                   gttgggCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCGGGTATCCCCTGTGCAGCGATCATGGCCGCCGCCGATGTAGAGCGCATCATCGAGGCCg        >  4:295046‑M2/7‑149 (MQ=255)                                                                                                                                                      gggCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCGGGTATCCCCTGTGCAGCGAt                                              <  6:120342‑M2/105‑1 (MQ=255)                                                                                                                                                         cTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCAATTGCGGGTATCCCCTGTGCAGCGATCATGGCCGCCGCCGATGTAGAGCGCATCATCGAGGCCGTCGAgg  >  4:361738/1‑149 (MQ=255)                                                                                                                                                         |                                                                                                                                                       CTAGCAGGTGCTATCTTTAGTTTCCCGGCGGCCGCATCGATGTGGCCACCCGCTCATCACGTCCAGGTACGGACAAGGAGGCTGGCATGAACAAGATGACGTTC‑‑‑‑CCCAACGCCTGCCAGGTGATGCGCTGGCATTTCCATCCGTTGGGCTTCGAGGCCAGCATGGA‑TGCGCCACGCAGCATGGTCGCGCGGCTGTTCGACCGCGCCAGCGGTG‑AAACCCTGCTGGCGATTGCGGGTATCCCCTGTGCAGCGATCATGGCCGCCGCCGATGTAGAGCGCATCATCGAGGCCGTCGAGG  >  NC_002947/4061908‑4062204

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.