New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4281980 =	53 (0.900)	3 (0.050)	3/244	NT	5.7%	intergenic (‑557/+161)	PP_3751/PP_3753	cyanate transporter/AraC family transcriptional regulator
	?	NC_002947	4282011 =	48 (0.850)					intergenic (‑588/+130)	PP_3751/PP_3753	cyanate transporter/AraC family transcriptional regulator

CGCCGCGTGAACGTGCTGCCCTGGCCTGGGTCGAGAGCCTGACCCGCTTGCCTGAACGGGGTGCGCCGCAAGAGCAATATGAAGCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCGGGCAAGCCCGCTCCTACAATTCTGGGCGTGCCCTGTAGGAGCGGGTTTACCCGCGAACACCGGCA  >  NC_002947/4281868‑4282159                                                                                                                                                |                                                                                                                                                     cgcccagaattgtaggagcgggcttgcccgcgaataggccagcacaggccacccgaaaggatcaggccggcaccatggcaaagccgacgccgaaccggttccaggcattgatGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAAt                                                                                                                                                 >  2:29632‑M1/113‑149 (MQ=255)  gccgcGTGAACGTGCTGCCCTGGCCTGGGTCGAGAGCCTGACCCGCTTGCCTGAACGGGGTGCGCCGCAAGAGCAATATGAAGCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATg                                                                                                                                                >  3:32271/1‑149 (MQ=255)          aaCGTGCTGCCCTGGCCTGGGTCGAGAGCCTGACCCGCTTGCCTGAACGGGGTGCGCCGCAAGAGCAATATGAAGCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGaa                                                                                                                                         <  2:356629/148‑1 (MQ=255)                   cccTGGCCTGGGTCGAGAGCCTGACCCGCTTGCCTGAACGGGGTGCGCCGCAAGAGCAATATGAAGCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCg                                                                                                                                 <  7:342199/147‑1 (MQ=255)                        gcctggGTCGAGAGCCTGACCCGCTTGCCTGAACGGGGTGCGCCGCAAGAGCAATATGAAGCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCg                                                                                                                                 <  5:384298/142‑1 (MQ=255)                        gcctggGTCGAGAGCCTGACCCGCTTGCCTGAACGGGGTGCGCCGCAAGAGCAATATGAAGCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCg                                                                                                                                 >  6:384298/1‑142 (MQ=255)                         cctggGTCGAGAGCCTGACCCGCTTGCCTGAACGGGGTGCGCCGCAAGAGCAATATGAAGCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGc                                                                                                                         >  6:35493/1‑149 (MQ=255)                          ctggGTCGAGAGCCTGACCCGCTTGCCTGAACGGGGTGCGCCGCAAGAGCAATATGAAGCCCTACAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCt                                                                                                                        >  7:331359/1‑149 (MQ=255)                               tCGAGAGCCTGACCCGCTTGCCTGAACGGGGTGCGCCGCAAGAGCAATATGAAGCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGc                                                                                                                    >  6:229511/1‑148 (MQ=255)                                 gagaGCCTGACCCGCTTGCCTGAACGGGGTGCGCCGCAAGAGCAATATGAAGCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCAt                                                                                                                 <  4:61583/149‑1 (MQ=255)                                       cTGACCCGCTTGCCTGAACGGGGTGCGCCGCAAGAGCAATATGAAGCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGcc                                                                                                           >  2:100941/1‑149 (MQ=255)                                        tGACCCGCTTGCCTGAACGGGGTGCGCCGCAAGAGCAATATGAAGCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGt                                                                                                                                    >  5:243608/1‑123 (MQ=255)                                        tGACCCGCTTGCCTGAACGGGGTGCGCCGCAAGAGCAATATGAAGCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGt                                                                                                                                    <  6:243608/123‑1 (MQ=255)                                          aCCCGCTTGCCTGAACGGGGTGCGCCGCAAGAGCAATATGAAGCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGATCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCg                                                                                                          <  4:200013/147‑1 (MQ=255)                                            ccGCTTGCCTGAACGGGGTGCGCCGCAAGAGCAATATGAAGCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCt                                                                                                      >  7:249889/1‑149 (MQ=255)                                                  gCCTGAACGGGGTGCGCCGCAAGAGCAATATGAAGCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCt                                                                                                >  5:36954/1‑149 (MQ=255)                                                    cTGAACGGGGTGCGCCGCAAGAGCAATATGAAGCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCttt                                                                                              <  2:45938/149‑1 (MQ=255)                                                       aaCGGGGTGCGCCGCAAGAGCAATATGAAGCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTc                                                                                             <  4:32271/147‑1 (MQ=255)                                                         cGGGGTGCGCCGCAAGAGCAATATGAAGCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCgggc                                                                                         <  5:229511/149‑2 (MQ=255)                                                            ggTGCGCCGCAAGAGCAATATGAAGCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGc                                                                                      >  2:304918/1‑149 (MQ=255)                                                             atcaggccggcaccatggcaaagccgacgccgaaccggttccaggcattgatGGTGGCCAACCTGACCTTGGCAATTGCCACCAt                                                                                                                                                     <  7:325358‑M1/33‑1 (MQ=255)                                                             atcaggccggcaccatggcaaagccgacgccgaaccggttccaggcattgatGGTGGCCAACCTGACCTTGGCAATTGCCACCAt                                                                                                                                                     >  8:325358‑M1/53‑85 (MQ=255)                                                                 gccgcAAGAGCAATATGAAGCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGt                                                                                                                                    >  7:113521/1‑98 (MQ=255)                                                                 gccgcAAGAGCAATATGAAGCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGt                                                                                                                                    <  8:113521/98‑1 (MQ=255)                                                                    gcAAGAGCAATATGAAGCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTg                                                                              >  2:334507/1‑149 (MQ=255)                                                                                tGAAGCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCgg                                                                  <  1:304918/149‑1 (MQ=255)                                                                                 gAAGCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTAGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCggg                                                                 >  7:75154/1‑149 (MQ=255)                                                                                   aGCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCGGGc                                                                >  4:72158/1‑148 (MQ=255)                                                                                   aGCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCGGGc                                                                >  7:21670/1‑148 (MQ=255)                                                                                    gCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCGGGCaa                                                              <  5:35493/149‑1 (MQ=255)                                                                                        tGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGc                                                                            >  7:227901/1‑131 (MQ=255)                                                                                        tGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGc                                                                            <  8:227901/131‑1 (MQ=255)                                                                                         gCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCt                                                                                    <  1:58836/122‑1 (MQ=255)                                                                                         gCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCt                                                                                    >  2:58836/1‑122 (MQ=255)                                                                                             gAACACATCGATCCGGGCGAGGTGTCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCGGGCAAGCCCGCTcc                                                     <  8:249889/149‑1 (MQ=255)                                                                                              aaCACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGCGCTGGCCTATTCGCGGGCAAGCCCGCTcc                                                     <  8:331359/148‑1 (MQ=255)                                                                                                cacTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCGGGCAAGCCCGCTCCTAc                                                  <  3:72158/149‑1 (MQ=255)                                                                                                   ttCGAGCCGGGCGAGGTGGCCAACCTGCCCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCGGGCAAGCCCGCTCCTACAAt                                               >  3:213291/1‑149 (MQ=255)                                                                                                   ttCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTg                                                                              <  5:179419/118‑1 (MQ=255)                                                                                                   ttCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTg                                                                              >  6:179419/1‑118 (MQ=255)                                                                                                      gAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCGGGCAAGCCCGCTCCTACAATTCt                                            >  6:48069/1‑149 (MQ=255)                                                                                                        gCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCGGGCAAGCCCGCTCCTACAATTCTgg                                          <  6:36954/149‑1 (MQ=255)                                                                                                         ccGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCATGTGCTGGACTATTAGCGGGCAAGCCCGCTCCTACAATTCTggg                                         >  2:325252/1‑149 (MQ=255)                                                                                                           attgatggtggcaattgccaaggtcaggttggccaccATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCGGGCAAGCCCGCTCCTACAATTCTGGGCg                                       >  2:29632‑M2/38‑149 (MQ=255)                                                                                                               atggtggcaattgccaaggtcaggttggccaccATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGAt                                                                                                   >  8:325358‑M2/34‑85 (MQ=255)                                                                                                               atggtggcaattgccaaggtcaggttggccaccATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGAt                                                                                                   <  7:325358‑M2/52‑1 (MQ=255)                                                                                                                 GGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCGGGCAAGCCCGCTCCTACAATTCTGGGCGTGCCCt                                 <  5:105654‑M1/149‑1 (MQ=255)                                                                                                                     GCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGTTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCGGGCAAGCCCGCTCCt                                                    >  4:71467‑M1/1‑126 (MQ=255)                                                                                                                     GCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCGGGCAAGCCCGCTCCt                                                    <  3:71467‑M1/126‑1 (MQ=255)                                                                                                                      CCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCGGGCAAGCCCGCTCCTACAATTCTGGGCGTGCCCTGTAg                             <  8:196978‑M1/148‑1 (MQ=255)                                                                                                                       cAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCGGGCAAGCCCGCTCCTACAATTCTGGGCGTGCCCTGTAg                             >  4:292972/1‑147 (MQ=255)                                                                                                                        aaCCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCGGGCAAGCCCGCTCCTACAATTCTGGGCGTGCCCTGTAGGAg                          >  7:343864/1‑149 (MQ=255)                                                                                                                           cTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCGGGCAAGCCCGCTCCTACAATTCTGGGCGTGCCCTGTAGGAGCgg                       >  2:199451/1‑149 (MQ=255)                                                                                                                            tGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCgg                                                                  >  5:109435/1‑105 (MQ=255)                                                                                                                            tGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCgg                                                                  <  6:109435/105‑1 (MQ=255)                                                                                                                             gACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTGTCGGGTGGCCTGTGCTGGCCTATTCGCGGGCAAGCCCGCTCCTACAATTCTGGGCGTGc                                    >  8:70678/1‑134 (MQ=255)                                                                                                                                cTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCGGGCAAGCCCGCTCCTACAATTCTGGGCGTGCCCTGTAGGAGCGGGTTTa                  >  4:38910/1‑149 (MQ=255)                                                                                                                                   ggCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCGGGCAAGCCCGCTCCTACAATTCTGGGCGTGCCCTGTAGGAGCGGGTTTAcc                <  6:229187/148‑1 (MQ=255)                                                                                                                                     cAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCGGGCAAGCCCGCTCCTACAATTCTGGGCGTGCCCTGTAGGAGCGGGTTTACCcgc             <  1:199451/149‑1 (MQ=255)                                                                                                                                           ccaccATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGGGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTCGCCTATTCGCGGGCCAGCCCGCTCCTACAATTCTGGGCGGGCCCTGTAGGAGCGGGTTTACCCGCGAacac       <  7:196978‑M2/144‑1 (MQ=255)                                                                                                                                            caccATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCGGGCAAGCCCGCTCCTACAATTCTGGGCGTGCCCTGTAGGAGCGGGTTTACCCGCGAACAcc      <  8:21670‑M2/145‑1 (MQ=255)                                                                                                                                            caccATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCGGGCAAGCCCGCTCCTACAATTCTGGGCGTGCCCTGTAGGAGCGGGCATGCCCgcgaagaa       >  1:156395‑M2/5‑145 (MQ=255)                                                                                                                                               cATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCGTATTCGCgg                                                                  <  6:337018‑M2/85‑1 (MQ=255)                                                                                                                                               cATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCgg                                                                  >  5:337018‑M2/2‑86 (MQ=255)                                                                                                                                               cATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCGGGCAAGCCCGCTCCTACAATTCTGGGCGTGCCCTGTAGGAGCGGGTTTACCCGCGAACACCGGc   <  8:343864‑M2/148‑1 (MQ=255)                                                                                                                                                aTCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCGGGCAAGCCCGCTCCTACAATTCTGGGCGTGCCCTGTAGGAGCGGGTTTACCCGCGAACACCGGCa  <  6:105654/149‑1 (MQ=255)                                                                                                                                                |                                                                                                                                                     CGCCGCGTGAACGTGCTGCCCTGGCCTGGGTCGAGAGCCTGACCCGCTTGCCTGAACGGGGTGCGCCGCAAGAGCAATATGAAGCCCTGCAGGAACACTTCGAGCCGGGCGAGGTGGCCAACCTGACCTTGGCAATTGCCACCATCAATGCCTGGAACCGGTTCGGCGTCGGCTTTGCCATGGTGCCGGCCTGATCCTTTCGGGTGGCCTGTGCTGGCCTATTCGCGGGCAAGCCCGCTCCTACAATTCTGGGCGTGCCCTGTAGGAGCGGGTTTACCCGCGAACACCGGCA  >  NC_002947/4281868‑4282159

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.