New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4316196	44 (0.740)	3 (0.050)	3/244	NT	6.5%	coding (279/1554 nt)	PP_3788	non‑ribosomal peptide synthetase
	?	NC_002947	= 4316253	45 (0.800)					coding (336/1554 nt)	PP_3788	non‑ribosomal peptide synthetase

ATGTGGTTGCGGTGAATGCGACAGTGCAACTGCGCTATCCCGTCGTTGTCCTGGGGTTACTGCTCGCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCTGATGACGCAATACCAACCTGTACGCTCTCGTCTCTGTTTTCGGGCAAGCCCGTCGGTGCTGCCTTCGACCTGTTCCCGGAGCCTTCACCCGAAGCGACTG  >  NC_002947/4316123‑4316395                                                                                                                                   |                                                                                                                                               aTGTGGTTGCGGTGAATGCGACAGTGCAACTGCGCTATCCCGTCGTTGTCCTGGGGTTACTGCTCGCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTc                                                                                                                              <  6:166931/149‑1 (MQ=255)   gtgGTTGCGGTGAATGCGACAGTGCAACTGCGCTATCCCGTCGTTGTCCTGGGGTTACTGCTCGCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCAt                                                                                                                            >  3:309377/1‑149 (MQ=255)           ggTGAATGCGACAGTGCAACTGCGCTATCCCGTCGTTGTCCTGGGGTTACTGCTCGCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACg                                                                                                                     >  3:342963/1‑148 (MQ=255)                aTGCGACAGTGCAACTGCGCTATCCCGTCGTTGTCCTGGGGTTACTGCTCGCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGa                                                                                                                <  4:309377/148‑1 (MQ=255)                aTGCGACAGTGCAACTGCGCTATCCCGTCGTTGTCCTGGGGTTACTGCTCGCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAg                                                                                                               <  2:272832/149‑1 (MQ=255)                 tGCGACAGTGCAACTGCGCTATCCCGTCGTTGTCCTGGGGTTACTGCTCGCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAg                                                                                                               >  1:291451/1‑148 (MQ=255)                  gCGACAGTGCAACTGCGCTATCCCGTCGTTGTCCTGGGGTTACTGCTCGCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCcggccggc                                                                                                                                  <  4:237964/128‑1 (MQ=255)                  gCGACAGTGCAACTGCGCTATCCCGTCGTTGTCCTGGGGTTACTGCTCGCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCcggccggc                                                                                                                                  >  3:237964/1‑128 (MQ=255)                    gACAGTGCAACTGCGCTATCCCGTCGTTGTCCTGGGGTTACTGCTCGCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAAcaggcc                                                                                                                                          <  6:267716‑M2/118‑7 (MQ=255)                    gACAGTGCAACTGCGCTATCCCGTCGTTGTCCTGGGGTTACTGCTCGCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAAcaggcc                                                                                                                                          >  5:267716‑M2/1‑112 (MQ=255)                    gACAGTGCAACTGCGCTATCCCGTCGTTGTCCTGGGGTTACTGCTCGCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCaa                                                                                                            >  4:265847/1‑148 (MQ=255)                    gACAGTGCAACTGCGCTATCCCGTCGTTGTCCTGGGGTTACTGCTCGCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCaa                                                                                                            >  5:369934/1‑148 (MQ=255)                    gACAGTGCAACTGCGCTATCCCGTCGTTGTCCTGGGGTTACTGCTCGCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCaa                                                                                                            >  7:2985/1‑148 (MQ=255)                           cAACTGCGCTATCCCGTCGTTGTCCTGGGGTTACTGCTCGCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCtga                                                                                                    >  4:215642/1‑149 (MQ=255)                              cTGAGCTATCGCGTCGTTGTGCTGGGGTTACTGCTCGCTGGCCTGGTCTACTTGCTAATCGCCGCAGCTCTGCCGCCTGATCGCAAGCGGGCGATCTGCGAACAGGACCTGCCGGCCCTCATGATCACGGAGGAGCAAAATCGtgatga                                                                                                 <  4:304769/149‑1 (MQ=255)                               tGCGCTATCCCGTCGTTGTCCTGGGGTTACTGCTCGCTGGCCTGGACTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCTGATGAc                                                                                                >  1:268486/1‑149 (MQ=255)                                  gcTATCCCGTCGTTGTCCTGGGGTTACTGCTCGCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCTGATGACGCa                                                                                             <  4:342963/149‑1 (MQ=255)                                   cTATCCCGTCGTTGTCCTGGGGTTACTGCTCGCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCTGATGACGCaa                                                                                            <  3:215642/149‑1 (MQ=255)                                      tCCCGTCGTTGTCCTGGGGTTACTGCTCGCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCTGATGACGCAAt                                                                                           <  6:300038/147‑1 (MQ=255)                                             gtTGTCCTGGGGTTACTGCTCGCTGGCCTGGTATACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCTGATGACGCAATACCAACCTg                                                                                  >  3:138014/1‑149 (MQ=255)                                                    tGGGGTTACTGCTCGCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCTGATGACGCAATACCAACCTGTACGctc                                                                           >  3:131939/1‑149 (MQ=255)                                                    gggggTTACTGCTCGCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCTGATGACGCAATACCAACCTGTACGctc                                                                           <  4:351929/148‑1 (MQ=255)                                                     ggggTTACTGCTCGCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCTGATGACGCAATACCAACCTGTACGctct                                                                          >  4:345591/1‑149 (MQ=255)                                                      gggTTACTGCTCGCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCTGATGACGCAATACCAACCTGTACGCtctc                                                                         <  6:369934/149‑1 (MQ=255)                                                      gggTTACTGCTCGCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCTGATGACGCAATACCAACCTGTACGCtctc                                                                         <  8:2985/149‑1 (MQ=255)                                                        gTTACTGCTCGCTGGCCTTGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCtgat                                                                                                   <  7:172364/121‑1 (MQ=255)                                                                  gCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAAcaggccagcgagcagtaaccccaggacaacgacgggatagcgcagttgcactgtcgcattcaccgcaaccacatccccgctg                                                              <  7:191287‑M2/148‑83 (MQ=255)                                                                  gCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAAcaggccagcgagcagtaaccccaggacaacgacgggatagcgcagttgcactgtcgcattcaccgcaaccacatccccgctg                                                              >  8:191287‑M2/1‑66 (MQ=255)                                                                  gCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAg                                                                                                         >  3:350800/1‑105 (MQ=255)                                                                  gCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAg                                                                                                         <  4:350800/105‑1 (MQ=255)                                                                   cTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAAcaggccagcgagcagtaaccccaggacaacgacgggatagcgcagttgcactgtcgcattcaccgcaaccacatccccgctgcg                                                            <  7:101354‑M2/149‑85 (MQ=255)                                                                      gCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCTGATGACGCAATACCAACCTGTACGCTCTCGTCTCTGTTTTCggg                                                          <  3:345591/148‑1 (MQ=255)                                                                      gCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCTGATGACGCAATACCAACCTGTACGCTCTCGTCTCTGTTTTCgg                                                           <  5:379348/147‑1 (MQ=255)                                                                        cTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCt                                                                                                      <  8:151030/102‑1 (MQ=255)                                                                        cTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCt                                                                                                      >  7:151030/1‑102 (MQ=255)                                                                                 ttGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCCGATGACGCAATACCAACCTGTACGCTCTCGTctct                                                                   >  8:29952/1‑128 (MQ=255)                                                                                 ttGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCCGATGACGCAATACCAACCTGTACGCTCTCGTctct                                                                   <  7:29952/128‑1 (MQ=255)                                                                                   gCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCTGATGACGCAATACCAACCTGTACGCTCTCGTCTCTTGTTTCGGGCAAGCCCGTCGGtg                                            >  8:130381/1‑149 (MQ=255)                                                                                   gCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCTGATGACGCAATACCAACCTGTACGCTCTCGTCTCTGTTTTCGGGCAAGCCCGTCGGtg                                            >  5:197868/1‑149 (MQ=255)                                                                                      aaTCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCTGATGACTCAATACCAACCTGTACGCTCTCGTCTCTGTTTTCTGGCAAGCCAGTCGGtgctt                                         <  4:138014/149‑2 (MQ=255)                                                                                                  tctGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCTGATGACGCAATACCAACCTGTACGCTCTCGTATCTGTTTTCGGGCAAGCCCGTCGGTGCTGCCTTCGACCTGt                             >  1:343900/1‑149 (MQ=255)                                                                                                   ctGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCTGATGACGCAATACCAACCTGTACGCTCTCGTCTCTGTTTTCGGGCAAGCCCGTCGGTGCTGCCt                                      <  7:148392/139‑1 (MQ=255)                                                                                                   ctGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCTGATGACGCAATACCAACCTGTACGCTCTCGTCTCTGTTTTCGGGCAAGCCCGTCGGTGCTGCCt                                      >  8:148392/1‑139 (MQ=255)                                                                                                         ccTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCTGATGACGCAATACCAACCTGTACGCTCTCGTCTCTGTTTTCGGGCAAGCCCGTCGGTGCTGCCTTCGACCTGTTCCCGGa                      <  2:291451/149‑1 (MQ=255)                                                                                                          cTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCTGATGACGCAATACCAACCTGTACGCTCTCGTCTCTGTTTTCGGGCAAGCCCGTCGGTGCTGCCTTCGACCTGTTCCCGGAg                     >  1:53331/1‑149 (MQ=255)                                                                                                                  aaGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCTGATGACGCAATACCAACCTGTACGCTCTCGTCTCTGTTTTCgg                                                           <  7:272842/103‑1 (MQ=255)                                                                                                                  aaGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCTGATGACGCAATACCAACCTGTACGCTCTCGTCTCTGTTTTCgg                                                           >  8:272842/1‑103 (MQ=255)                                                                                                                      gggCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCTGATGACGCAATACCAACCTGTACGCTCTCGTCTCTGTTTTCGGGCAAGCCCGTCGGTGCTGCCTTCGACCTGTTCCCGGAGCCTTCACCCGaa         <  2:268486/149‑1 (MQ=255)                                                                                                                        gCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCTGATGACGCAATACCAACCTGTACGCTCTCGTCTCTGTTTTCGGGCAAGCCCGTCGGTGCTGCCTTCGACCTGTTCCCGGAGCCTTCACCCGAAGc       >  6:305552/1‑149 (MQ=255)                                                                                                                             cTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCTGATGACGCAATACCAACCTGTACGCTCTCGTCTCTGTTTTCGGGCAAGCCCGTCGGTGCTGCCTTCGACCTGTTCCCGGAGCCTTCACCCGAAGCGACTg  >  6:246159/1‑149 (MQ=255)                                                                                                                                   |                                                                                                                                               ATGTGGTTGCGGTGAATGCGACAGTGCAACTGCGCTATCCCGTCGTTGTCCTGGGGTTACTGCTCGCTGGCCTGGTCTACTTGCCAATCGCCGCAGCTCTGCCGCCTGAGCGCAAGCGGGCGATCTGCGAACAGGCCCGGCCGGCCCTCATGATCACGGACGAGCAAAAGCCTGATGACGCAATACCAACCTGTACGCTCTCGTCTCTGTTTTCGGGCAAGCCCGTCGGTGCTGCCTTCGACCTGTTCCCGGAGCCTTCACCCGAAGCGACTG  >  NC_002947/4316123‑4316395

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.