New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4658500	72 (1.220)	4 (0.070)	4/240	NT	5.7%	coding (1136/1782 nt)	nuoC	NADH‑quinone oxidoreductase subunit C/D
	?	NC_002947	= 4658517	65 (1.170)					coding (1153/1782 nt)	nuoC	NADH‑quinone oxidoreductase subunit C/D

CCGCCAGCGCGCCTACACCGTGATCGAAGCGATCACCGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATGGGGCACCACCGGTGCCGGCTTGCGTGCCACCGGTTGCAACTTCGACCTGC  >  NC_002947/4658372‑4658661                                                                                                                                                  |                                                                                                                                                  ccGCCAGCGCGCCTACACCGTGATCGAAGCGATCACCGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCtcg                                                                                                                                                >  1:181085‑M2/1‑146 (MQ=255)   gCCAGCGCGCCTACACCGTGATCGAAGCGATCACCGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCtcgac                                                                                                                                              >  7:182882‑M2/1‑144 (MQ=255)   gCCAGCGCGCCTACACCGTGATCGAAGCGATCACCGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCtcgac                                                                                                                                              <  2:213945‑M2/149‑6 (MQ=255)      aGCGCGCCTACACCGTGATCGAAGCGATCACCGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCtcgacgaa                                                                                                                                           >  3:253372‑M2/1‑141 (MQ=255)       gcgcgcCTACCCCGTGATCGAAGCGATCACCGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAAt                                                                                                                                          <  2:156490/149‑1 (MQ=255)       gcgcgcCTACACCGTGATCGAAGCGATCACCGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTACCCAAGCGCCTCGACGAAt                                                                                                                                          <  8:315499/149‑1 (MQ=255)         gcgcCTACACCGTGATCGAAGCGATCACCGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATac                                                                                                                                        <  1:2033/149‑1 (MQ=255)                   cGTGATCGAAGCGATCACCGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACAACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGgccg                                                                                                                              >  3:82923/1‑149 (MQ=255)                    gTGATCGAAGCGATCACCGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGgccgc                                                                                                                             >  8:196717/1‑149 (MQ=255)                          gAAGCGATCACCGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCa                                                                                                                                    >  6:306957/1‑136 (MQ=255)                          gAAGCGATCACCGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGc                                                                                                                        <  2:19902/148‑1 (MQ=255)                          gAAGCGATCACCGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCa                                                                                                                       <  5:249375/149‑1 (MQ=255)                           aaGCGATCACCGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCt                                                                                                                                                  <  6:379667‑M2/121‑2 (MQ=255)                           aaGCGATCACCGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCt                                                                                                                                                  >  5:379667‑M2/1‑120 (MQ=255)                           aaGCGATCACCGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCa                                                                                                                       >  1:63323/1‑148 (MQ=255)                           aaGCGATCACCGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCa                                                                                                                       >  5:108882/1‑148 (MQ=255)                               gATCACCGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACTACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACa                                                                                                                  <  4:82923/149‑1 (MQ=255)                               gATCACCGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCaaaa                                                                                                                    >  7:196564/1‑147 (MQ=255)                               gATCACCGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACa                                                                                                                  <  8:196564/149‑1 (MQ=255)                                aTCACCGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAAt                                                                                                                                          >  2:191232/1‑124 (MQ=255)                                aTCACCGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAAt                                                                                                                                          >  8:117677/1‑124 (MQ=255)                                aTCACCGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAAt                                                                                                                                          <  7:117677/124‑1 (MQ=255)                                aTCACCGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAAt                                                                                                                                          <  1:191232/124‑1 (MQ=255)                                   aCCGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCa                                                                                                               <  1:213945/148‑1 (MQ=255)                                   aCCGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCAt                                                                                                              >  6:262019/1‑149 (MQ=255)                                    ccGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATc                                                                                                             >  8:95200/1‑149 (MQ=255)                                      ggCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGGCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCt                                                                                                           >  1:285385/1‑149 (MQ=255)                                      ggCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCACGGCCGCCCTGCAAAACAGCATCCt                                                                                                           >  8:308637/1‑149 (MQ=255)                                            ctccTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAgg                                                                                                      <  6:34668/146‑1 (MQ=255)                                               cTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGccc                                                                                                                           >  2:95589/1‑124 (MQ=255)                                               cTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGccc                                                                                                                           <  1:95589/124‑1 (MQ=255)                                                     ccGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATacac                                                                                                                                      >  6:61418/1‑107 (MQ=255)                                                     ccGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATacac                                                                                                                                      <  5:61418/107‑1 (MQ=255)                                                     ccGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCAt                                                                                           <  2:45640/149‑1 (MQ=255)                                                     ccGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCAt                                                                                           >  7:234314/1‑149 (MQ=255)                                                         ccTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGc                                                                                       <  4:47904/149‑1 (MQ=255)                                                            ggTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGGCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGtt                                                                                    >  1:118767/1‑149 (MQ=255)                                                             gTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTg                                                                                   >  2:33964/1‑149 (MQ=255)                                                                            cGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCa                                                                    <  7:95200/149‑1 (MQ=255)                                                                             gTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCaa                                                                   <  8:79835/149‑1 (MQ=255)                                                                                gCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCGTTACCATCGGCGTTGCCGCGTACAACACCAAg                                                                  <  1:33964/148‑1 (MQ=255)                                                                                 cccACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑Ta                                                                                               >  4:149922/1‑117 (MQ=255)                                                                                 cccACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑Ta                                                                                               <  3:149922/117‑1 (MQ=255)                                                                                  ccACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAg                                                              <  7:196717/149‑1 (MQ=255)                                                                                  ccACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAg                                                              >  4:226512/1‑149 (MQ=255)                                                                                  ccACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATAAACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGGGTTGCCGCGTACAACACCAAGGAAg                                                              >  8:239319/1‑149 (MQ=255)                                                                                    aCGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAgcg                                                            <  2:118767/149‑1 (MQ=255)                                                                                      gACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCt                                                          <  3:329491/149‑1 (MQ=255)                                                                                       aCCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTg                                                         >  4:268163/1‑149 (MQ=255)                                                                                           gCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCGTCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAAt                                                     >  3:141835/1‑149 (MQ=255)                                                                                            ccACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATg                                                    >  5:137222/1‑149 (MQ=255)                                                                                             cACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATgg                                                   <  3:268163/149‑1 (MQ=255)                                                                                              aCGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATggg                                                  <  2:63323/149‑1 (MQ=255)                                                                                                gTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATGGGGc                                                <  6:137222/149‑1 (MQ=255)                                                                                                 tGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATgg                                                   >  2:169121/1‑145 (MQ=255)                                                                                                 tGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATgg                                                   <  1:169121/145‑1 (MQ=255)                                                                                                 tGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATGGGGca                                               >  1:345346/1‑149 (MQ=255)                                                                                                     tGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATGGGGcaccac                                           >  3:67881/1‑149 (MQ=255)                                                                                                           aaGCTGGTCAAGGACTTCGTCGAATGGCTGCCAAAGCGCCTCGACGAATACAACAAGGCCGCACTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAAAACAAAGGAAGAGCGGGACTGGGGCACCACCGCTGc                                     >  4:235164/1‑149 (MQ=255)                                                                                                             gCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATGGGGCACCACCGGTGCCg                                   >  4:99042/1‑149 (MQ=255)                                                                                                                 gTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATGGGGCACCACCGGTGCCGGCtt                               >  7:130213/1‑149 (MQ=255)                                                                                                                  tCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCtcgacgaagtccttgaccagcttgtcccagccacgtggcaggtcgtgggcgacgccaccgatgcggtaccaggccgggtgcaggc                                                              <  4:309474‑M2/118‑86 (MQ=255)                                                                                                                  tCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCtcgacgaagtccttgaccagcttgtcccagccacgtggcaggtcgtgggcgacgccaccgatgcggtaccaggccgggtgcaggc                                                              >  3:309474‑M2/1‑33 (MQ=255)                                                                                                                  tCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATgg                                                   <  5:92048/128‑1 (MQ=255)                                                                                                                  tCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATgg                                                   >  6:92048/1‑128 (MQ=255)                                                                                                                    aaGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATGGGGCACCACCGGTGCCGGCTTGc                             <  5:262019/148‑1 (MQ=255)                                                                                                                    aaGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATGGGGCACCACCGGTGCCGGCTTGCg                            >  3:141554/1‑149 (MQ=255)                                                                                                                    aaGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATGGGGCACCACCGGTGCCGGCTTGCg                            >  3:5004/1‑149 (MQ=255)                                                                                                                     aGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATGGGGCACCACCGGTGCCGGCTTGCGt                           <  2:221045/149‑1 (MQ=255)                                                                                                                       gACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATGGGGCACCACCGGTGCCGGCTTGCGTGc                         >  6:317740/1‑149 (MQ=255)                                                                                                                       gACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATGGGGCACCACCGGTGCCGGCTTGCGTGc                         <  3:226512/149‑1 (MQ=255)                                                                                                                            cgtcgATTGGCTGACCAAGCGCCTCGACGAATACACCAAGCCCGCCCTGCAAAACAGCATCCTCAATGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATGGGGCACCACCGGTGCCGGCTTGCGTGCCa                       <  2:262525/146‑1 (MQ=255)                                                                                                                            cgtcgAATGGCTGCCCAAGCGCCtcgacgaagtccttgaccagcttgtcccagccacgtggcaggtcgtgggcgacgccaccgatgcggtaccaggccgggtgcaggcgg                                                            <  5:205574‑M2/110‑88 (MQ=255)                                                                                                                            cgtcgAATGGCTGCCCAAGCGCCtcgacgaagtccttgaccagcttgtcccagccacgtggcaggtcgtgggcgacgccaccgatgcggtaccaggccgggtgcaggcgg                                                            >  6:205574‑M2/1‑23 (MQ=255)                                                                                                                            cgtcgAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATGGGGCACCACCGGTGCCGGCTTGCGTGCCACCg                    >  8:279756/1‑149 (MQ=255)                                                                                                                             gtagAATGGCTGCCCAACCGCCTCGACCAATAAACCAAGGCCGACCTCCAAAACAGCATCCTAAAGGCCCC‑TACCATCCGCGATGCCGAGTACAACACCAAGGAAGCGCTGGAATGAGGAACCAACCGTTCAGGCTTCAGTGCCACCg                    >  4:30608/4‑148 (MQ=255)                                                                                                                                gAATGGCTGCCCAAGCGCCTCGACGAATACTCCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGTCGTTGCCGCGTACTACACCAAGGAAGCGCTGGAATGGGGCACCACCGGTGCCGGCTTGCGTGCCACCGGtt                 <  3:30608/148‑1 (MQ=255)                                                                                                                                  aTGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATGGGGCACCACCGGTGc                                     <  6:365468/126‑1 (MQ=255)                                                                                                                                  aTGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATGGGGCACCACCGGTGc                                     >  5:365468/1‑126 (MQ=255)                                                                                                                                   tGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCTTTGCCGCGTACAACACCAAGGAAGCGCTGGAATGGGGCACCACCGGTGCCGGCTTGCGTGCCACCGGTTGCaa             <  6:108882/149‑1 (MQ=255)                                                                                                                                        gCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATGGGGCACCACCGGTGCCGGCTTGCGTGCCACCGGTTGCAACTTCg        >  4:55022/1‑149 (MQ=255)                                                                                                                                          ccAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCGTCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATGGGGCACCACCGGTGCCGGCTTGCGTGCCACCGGTTGCAACTTCGAc      <  4:141835/149‑1 (MQ=255)                                                                                                                                          ccAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATGGGGCACCACCGGTGCCGGCTTGCGTGCCACCGGTTGCAACTTCGAc      <  5:317740/149‑1 (MQ=255)                                                                                                                                            aaGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATGGGGCACCACCGGTGACGGCTTCCGTGCCACCGGATGCAACTTCGCCCt    >  7:332085/1‑149 (MQ=255)                                                                                                                                              gcgcCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATGGGGCACCACCGGTGCCGGCTTGCGTGCCACCGGTTGCAACTTCGACCTGc  <  8:234314/149‑1 (MQ=255)                                                                                                                                              gcgcCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATGGGGCACCACCGGTGCCGGCTTGCGTGCCACCGGTTGCAACTTCGACCTGc  <  7:308637/149‑1 (MQ=255)                                                                                                                                              gcgcCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATGGGGCACCACCGGTGCCGGCTTGCGTGCCACCGGTTGCAACTTCGACCTGc  <  2:345346/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                  CCGCCAGCGCGCCTACACCGTGATCGAAGCGATCACCGGCTTCCGCCTGCACCCGGCCTGGTACCGCATCGGTGGCGTCGCCCACGACCTGCCACGTGGCTGGGACAAGCTGGTCAAGGACTTCGTCGAATGGCTGCCCAAGCGCCTCGACGAATACACCAAGGCCGCCCTGCAAAACAGCATCCTCAAGGGCCG‑TACCATCGGCGTTGCCGCGTACAACACCAAGGAAGCGCTGGAATGGGGCACCACCGGTGCCGGCTTGCGTGCCACCGGTTGCAACTTCGACCTGC  >  NC_002947/4658372‑4658661

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.