New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5237877 =71 (1.200)4 (0.070) 4/248 NT 5.7% coding (337/387 nt) PP_4614 hypothetical protein
?NC_002947 5237910 = 63 (1.100)coding (370/387 nt) PP_4614 hypothetical protein

GCCTCATCACCCCGGCCCAACGCAATGACCCGGTGCGCCTGCAACGGGTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAGGGGTAGCGGTACGAAGCGTAGCGCACCACCAGGATCGAGAACGCCAGCAACAGGATGCCGCCGCACAGGTACAG  >  NC_002947/5237764‑5238056
                                                                                                                                                  |                                                                                                                                                  
gcCTCATCACCCCGGCCCAACGCAATGACCCGGTGCGCCTGCAACGGGTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCAGCCACGAGCCGCGCCAt                                                                                                                                                  >  8:258857/1‑149 (MQ=255)
    gatcctggtggtgcgctacgcttcgtaccgctacccctcgaccaaggtgctggacgccaacggcaaggcagtggaggagggcaagtagccctcaattggcaacaaaatgGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCAtt                                                                                                                                                 >  3:149355‑M1/110‑146 (MQ=255)
    catcaCCCCGGCCCAACGCAATGACCCGGTGCGCCTGCAACGGGTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTttg                                                                                                                                              <  8:80033/149‑1 (MQ=255)
     atcaCCCCGGCCCAACGCAATGACCCGGTGCGCCTGCAACGGGTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTttgt                                                                                                                                             <  6:95678/149‑1 (MQ=255)
      tcaCCCCGGCCCAATGCAATGACCCGGTGCGCCTGCAACGGGTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTttgtt                                                                                                                                            <  1:319209/149‑1 (MQ=255)
       cctggtggtgcgctacgcttcgtaccgctacccctcgaccaaggtgctggacgccaacggcaaggcagtggaggagggcaagtagccctcaattggcaacaaaatgGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTttgtt                                                                                                                                            <  1:349664‑M1/42‑1 (MQ=255)
       cctggtggtgcgctacgcttcgtaccgctacccctcgaccaaggtgctggacgccaacggcaaggcagtggaggagggcaagtagccctcaattggcaacaaaatgGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTttgtt                                                                                                                                            >  2:349664‑M1/107‑148 (MQ=255)
        ctggtggtgcgctacgcttcgtaccgctacccctcgaccaaggtgctggacgccaacggcaaggcagtggaggagggcaagtagccctcaattggcaacaaaatgGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGc                                                                                                                                          >  5:151288‑M1/106‑149 (MQ=255)
        aCCCCGGCCCAACGCAATGACCCGGTGCGCCTGCAACGGGTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGc                                                                                                                                          <  4:198486/149‑1 (MQ=255)
              gCCCAACGCAATGACCCGGTGCGCCTGCAACGGGTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTg                                                                                                                                    <  7:258857/149‑1 (MQ=255)
               cccAACGCAATGACCCGGTGCGCCTGCAACGGGTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAAtt                                                                                                                                     >  7:129307/1‑147 (MQ=255)
                       aaTGACCCGGTGCGCCTGCAACGGGTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACt                                                                                                                           >  2:180746/1‑149 (MQ=255)
                          gACCCGGTGCGCCTGCAACGGGTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGc                                                                                                                        >  6:337627/1‑149 (MQ=255)
                            cccGGTGCGCCTGCAACGGGTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGccc                                                                                                                      >  5:108822/1‑149 (MQ=255)
                             ccGGTGCGCCTGCAACGGGTGATCGACAGCATCCGCCTGGACCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGAACCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTAATTGAcct                                                                                                                     >  5:282941/1‑149 (MQ=255)
                              cGGTGCGCCTGCAACGGGTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCcctc                                                                                                                    <  5:113272/149‑1 (MQ=255)
                                 tGCGCCTGCAACGGGTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCctcctc                                                                                                                 <  1:180746/149‑1 (MQ=255)
                                   cgcCTGCAACGGGTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCa                                                                                                               >  2:183889/1‑149 (MQ=255)
                                   cgcCTGCAACGGGTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCAAGTAGCcctcaattg                                                                                                               <  7:128837/149‑6 (MQ=255)
                                      cTGCAACGGGTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTg                                                                                                            <  4:169831/149‑1 (MQ=255)
                                          aaCGGGTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCtt                                                                                                        <  1:377255/149‑1 (MQ=255)
                                           aCGGGTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCTGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTTAGGGCTACTTGCCCTCCTCCACTGCCTTg                                                                                                       <  1:219117/149‑1 (MQ=255)
                                             gggTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGcc                                                                                                     <  5:337627/149‑1 (MQ=255)
                                              ggTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGc                                                                                                      <  5:166921/147‑1 (MQ=255)
                                              ggTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGc                                                                                                      >  6:166921/1‑147 (MQ=255)
                                               gTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTAc                                                                                                                            >  2:1947/1‑124 (MQ=255)
                                                 gATCGACAGCTTCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTg                                                                                                 >  5:16961/1‑149 (MQ=255)
                                                     gACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGt                                                                                             >  4:45890/1‑149 (MQ=255)
                                                      aCAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTc                                                                                            <  4:59959/149‑1 (MQ=255)
                                                           aTCCGCCTTGGCCTTGCGATCGAACTCATCCAGAACCCCCTTCAAGTGGTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCa                                                                                       <  3:235489/149‑1 (MQ=255)
                                                               gCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCtt                                                                                   >  4:273269/1‑149 (MQ=255)
                                                                  tGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGt                                                                                >  8:131263/1‑149 (MQ=255)
                                                                   gggCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTc                                                                               >  3:345411/1‑149 (MQ=255)
                                                                      ccTTGCGATGGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTGGCGTCCAGCACCTTg                                                                                  <  7:290820/142‑1 (MQ=255)
                                                                      ccTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTGGCGTCCAGCACCTTg                                                                                  >  8:290820/1‑142 (MQ=255)
                                                                          gCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAgggg                                                                         <  4:345411/148‑1 (MQ=255)
                                                                          gCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAgggg                                                                         <  5:340233/148‑1 (MQ=255)
                                                                            gATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCt                                                                                    <  6:376664/135‑1 (MQ=255)
                                                                            gATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCt                                                                                    >  5:376664/1‑135 (MQ=255)
                                                                             aTCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAGGGGTAGc                                                                     >  6:106392/1‑149 (MQ=255)
                                                                                gAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTTGAGGGGTAGCgg                                                                   >  8:135455/1‑148 (MQ=255)
                                                                                  aCTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTgg                                                                                                <  6:362859/117‑1 (MQ=255)
                                                                                  aCTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCAGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTgg                                                                                                >  5:362859/1‑117 (MQ=255)
                                                                                      aGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCa                                                                                          >  2:234787/1‑119 (MQ=255)
                                                                                      aGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCa                                                                                          <  1:234787/119‑1 (MQ=255)
                                                                                      aGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTTGAGGGGTAGCGGTACGaa                                                             <  7:135455/148‑1 (MQ=255)
                                                                                          aGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAgg                                                                           >  7:349299/1‑130 (MQ=255)
                                                                                          aGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAGGGGTAGCGGTACGAAGCGTa                                                        <  3:273269/149‑1 (MQ=255)
                                                                                           gAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTcc                                                                                           <  8:326287/113‑1 (MQ=255)
                                                                                           gAACCCCCTGCAAGGGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTcc                                                                                           >  7:326287/1‑113 (MQ=255)
                                                                                               ccccTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAGGGGTAGCGGTACGAAGCGTAGCGca                                                   >  5:380067/1‑149 (MQ=255)
                                                                                                cccTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCGAGCACCTTGGTCGAGGGGTAGCGGTACGAAGCGTAGCGcac                                                  >  5:328412/1‑149 (MQ=255)
                                                                                                 ccTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCGTGGTCGAGGGGTAGCGGTACGAAGCGTAGCGcccc                                                 >  5:24548/1‑149 (MQ=255)
                                                                                                 ccTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACGTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAGGGGTAGCGGTACGAAGCGTAGAGcac                                                  >  5:149348/1‑148 (MQ=255)
                                                                                                  cTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAGGGGTAGCGGTACGAAGCGTAGCGcacca                                                >  8:64733/1‑149 (MQ=255)
                                                                                                  cTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGACATTTTGTTGCCAATTGAGCGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGTCGTCCAGCACCTTGGTCGAGGGGTAGCGGTACGAAGCGTAGCGcacca                                                <  6:248047/149‑1 (MQ=255)
                                                                                                    gCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAGGGGTAGCGGTACGAAGCGTAGCGcaccac                                               >  7:352391/1‑148 (MQ=255)
                                                                                                     cAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAgg                                                                           >  4:237956/1‑119 (MQ=255)
                                                                                                     cAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAgg                                                                           <  3:237956/119‑1 (MQ=255)
                                                                                                     cAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAGGGGTAGCGGTACGAAGCGTAGCGCAccacca                                             <  8:129307/149‑1 (MQ=255)
                                                                                                      gcaacaaaatggcgcggctcgtggcgggcgtcacgggtcagcgcCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAGGGGTAGCGGTACGAAGCGTAGCGCACCACCAg                                            >  5:151288‑M2/45‑149 (MQ=255)
                                                                                                       aGTGCTGGCCGCGCTGTAGAGTTACGCCAGCCACTTGCGGTGCCATTTTGTTGCCAATTGATGGCTACTTGCCGTGCTGGTCTGCCTTTCCGTTTGCGTCCAGCTGCTTGGTCGTGGGGTAGCGGTTCGAAGGGTAGCGCACCACAAg                                            <  6:282941/148‑1 (MQ=255)
                                                                                                        gTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAGGGGTAGCGGTACGAAGCGTAGCGCACCACCAGGa                                          <  6:16961/149‑1 (MQ=255)
                                                                                                        gTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAGGGGTAGCGGTACGAAGCGTAGCGCACCACCAGGa                                          >  2:66344/1‑149 (MQ=255)
                                                                                                        aacaaaatggcgcggctcgtggcgggcgtcacgggtcagcgcCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAGGGGTAGCGGTACGAAGCGTAGCGCACCACCAgg                                           >  2:349664‑M2/43‑148 (MQ=255)
                                                                                                        aacaaaatggcgcggctcgtggcgggcgtcacgggtcagcgcCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAGGGGTAGCGGTACGAAGCGTAGCGCACCACCAgg                                           <  1:349664‑M2/106‑1 (MQ=255)
                                                                                                           cTGGCCGCGCTGACCCGAGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAGGGGTAGCGGTACGAAGCGTAGCGCACCACCAGGATc                                        <  5:106392/148‑1 (MQ=255)
                                                                                                             aatggcgcggctcgtggcgggcgtcacgggtcagcgcCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAGGGGTAGCGGTACGAAGCGTAGCGCACCACCAGGATc                                        >  3:149355‑M2/38‑146 (MQ=255)
                                                                                                                   GCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCTAGGGGTAGCGGTACGAAGCGTAGCGCACCACCAGGATCGAGAACGcc                               >  4:141921‑M1/1‑149 (MQ=255)
                                                                                                                       aCCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAGGGGTAGCGGTACGAAGCGTAGCGCACCACCAGGATCGAGAACGCCAg                             <  7:64733/147‑1 (MQ=255)
                                                                                                                               cgcccgccACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAGGGGTAGCGGTACGAAGCGTAGCGCACCACCAGGATCGAGAACGCCAGCAACAGGATg                   >  8:183968/1‑149 (MQ=255)
                                                                                                                                gcccgccACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAGGGGTAGCGGTACGAAGCGTAGCGCACCACCAGGATCGAGAACGCCAGCAACAGGATgc                  <  1:183889/149‑1 (MQ=255)
                                                                                                                                       aCGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAGGGGTAGCGGTACGAAGCGTAGCGCACCACCAGGATCGAGAACGCCAGCAACAGGATGCCGCCGca           >  2:129285/1‑149 (MQ=255)
                                                                                                                                         gAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAGGGGTAGCGGTACGAAGCGTAGCGCACCACCAGGATCGAGAACGCCAGCAACAGGATGCCGCCGca           >  3:115540/1‑147 (MQ=255)
                                                                                                                                             cgcgCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAGGGGTAGCGGTACGACGCGTAGCGCACCACCAGGATCGAGAACGCCAGCAACAGGATGCCGCCTCACAGGTa     >  6:356557/1‑149 (MQ=255)
                                                                                                                                             cgcgCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAGGGGTAGCGGTACGAAGCGTAGCGCACCACCAGGATCGAGAACGCCAGCAACAGGATGCCGCCGCACAGGTa     <  8:352391/149‑1 (MQ=255)
                                                                                                                                              gcgcCATATTGTTGCCAATTGAGCGCTACTTGCCATCCTCCACTGCCTTGCCGATGGCGTCCAGCACCTTGGTCCAGGGCTAGCGGTACGAAGCGTACCGCACCACCAGGATCGAGAACGCCAGCAACAGGATGCCGCCGCACAGGTa     >  8:245044‑M2/5‑148 (MQ=255)
                                                                                                                                               cgcCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAGGGGTAGCGGTACGAAGCGTAGCGCACCACCAGGATCGAGAACGCCAGCAACAGGATGCCGCCGCACAGGTa     >  3:366830‑M2/4‑147 (MQ=255)
                                                                                                                                                gcCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAGGGGTAGCGGTACGAAGCGTAGCGCACCACCAGGATCGAGAACGCCAGCAACAGGATGCCGCCGCACAGGTACAg  <  4:366830‑M2/147‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
GCCTCATCACCCCGGCCCAACGCAATGACCCGGTGCGCCTGCAACGGGTGATCGACAGCATCCGCCTGGGCCTTGCGATCGAACTCAGCCAGAACCCCCTGCAAGTGCTGGCCGCGCTGACCCGTGACGCCCGCCACGAGCCGCGCCATTTTGTTGCCAATTGAGGGCTACTTGCCCTCCTCCACTGCCTTGCCGTTGGCGTCCAGCACCTTGGTCGAGGGGTAGCGGTACGAAGCGTAGCGCACCACCAGGATCGAGAACGCCAGCAACAGGATGCCGCCGCACAGGTACAG  >  NC_002947/5237764‑5238056

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.