New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5709382	72 (1.220)	4 (0.070)	4/244	NT	6.3%	coding (3400/4761 nt)	PP_5009	hypothetical protein
	?	NC_002947	= 5709458	51 (0.910)					coding (3476/4761 nt)	PP_5009	hypothetical protein

ATCGGGCTGCCCCGCGTTCCAGAGACTGCCGAGCAGATACAGCAATACCTCGATTATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAACGCAGGACGTATTCGACACTGGTCATTCGGGCCCAGCTGCTCAGTGACCTGGCCTACCTCGCTGTGGACAAGACCCGCCTCACTG  >  NC_002947/5709313‑5709598                                                                                                                                                  |                                                                                                                                             aTCGGGCTGCCCCGCGTTCCAGAGACTGCCGAGCAGATACAGCAATACCTCGATTATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAgga                                                                                                                                           <  7:279189‑M2/149‑4 (MQ=255)     ggCTGCCCCGCGTTCCAGAGACTGCCGAGCAGATACAGCAATACCTCGATTATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAggaccc                                                                                                                                        <  5:319766‑M2/148‑7 (MQ=255)     ggCTGCCCCGCGTTCCAGAGACTGCCGAGCAGATACAGCAATACCTCGATTATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAggaccc                                                                                                                                        <  6:293876‑M2/148‑7 (MQ=255)        tGCCCCGCGTTCCAGAGACTGCCGAGCAGATACAGCAATACCTCGATTATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGAcccc                                                                                                                                       >  4:350511/1‑146 (MQ=255)        tGCCCCGCGTTCCAGAGACTGCCGAGCAGATACAGCAATACCTCGATTATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGAcccc                                                                                                                                       >  7:86443/1‑146 (MQ=255)        tGCCCCGCGTTCCAGAGACTGCCGAGCAGATACAGCAATACCTCGATTATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGAcccc                                                                                                                                       >  1:86331/1‑146 (MQ=255)             cgcgTTCCAGAGACTGCCGAGCAGATACAGCAATACCTCGATTATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGa                                                                                                                               <  7:245592/149‑1 (MQ=255)                 ttCCAGAGACTGCCGAGCAGATACGGCAATACCTCGATTATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGAtttt                                                                                                                           >  2:134737/1‑149 (MQ=255)                   ccAGAGACTGCCGAGCAGATACAGCAATACCTCGATTATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTc                                                                                                                          <  3:350511/148‑1 (MQ=255)                    cAGAGACTGCCGAGCAGATACAGCAATACCTCGATTATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTcc                                                                                                                         <  5:240064/148‑1 (MQ=255)                    cAGAGACTGCCGAGCAGATACAGCAATACCTCGATTATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTcc                                                                                                                         >  6:344936/1‑148 (MQ=255)                    cAGAGACTGCCGAGCAGATACAGCAATACCTCGATTATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTcc                                                                                                                         >  3:134570/1‑148 (MQ=255)                       cgaCTGCCGAGCAGATACGGCAATACCTCGATTATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAAt                                                                                                                     <  1:134737/148‑1 (MQ=255)                         aCTGCCGAGCAGATACAGCAATACCTCGATTATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATaa                                                                                                                   <  4:377347/149‑1 (MQ=255)                              cGAGCAGATACAGCAATACCTCGATTATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCa                                                                                                              <  5:293876/149‑1 (MQ=255)                               gAGCAGATACAGCAATACCTCGATTATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCAc                                                                                                             >  6:360229/1‑149 (MQ=255)                                  cAGATACAGCAATACCTCGATTATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGACCCTGGCGGAAACACTGCACCACCCCAAGATCGATTACCCCAATAAAGCCACGaa                                                                                                          <  6:89860/149‑1 (MQ=255)                                         aGCAATACCTCGATTATCGCGAACGGGTCTGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAg                                                                                                     <  2:65990/147‑1 (MQ=255)                                         aGCAATACCTCGATTATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAg                                                                                                     >  1:65990/1‑147 (MQ=255)                                         aGCAATACCTCGATTATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGcc                                                                                                   <  5:325090/149‑1 (MQ=255)                                            aaTACCTCGATTATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAg                                                                                                <  4:17568/149‑1 (MQ=255)                                                ccTCGATTATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCGCAATAAAGCCACGAAACTAGCCAAGAcc                                                                                             <  2:86331/148‑1 (MQ=255)                                                 cTCGATTATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCAt                                                                                           >  6:129102/1‑149 (MQ=255)                                                    tggaaTCGCGGACCCGTTCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCAtt                                                                                          <  3:214524/143‑1 (MQ=255)                                                    tggaaTCGCGGACCCGTTCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCAtt                                                                                          >  4:214524/5‑147 (MQ=255)                                                    gATTATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCAtt                                                                                          <  1:292638/147‑1 (MQ=255)                                                    gATTATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCAtt                                                                                          <  4:134570/147‑1 (MQ=255)                                                      ttATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAAc                                                                                      <  2:75793/149‑1 (MQ=255)                                                      ttATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAAc                                                                                      <  2:70487/149‑1 (MQ=255)                                                            cgAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAACGCAGGa                                                                                <  5:129102/149‑1 (MQ=255)                                                             gAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAggacccgttcgcgataatcgaggtattgctgtatctgctcggcagtctctggaacgcgggg                                                                                 <  4:86706‑M2/147‑62 (MQ=255)                                                             gAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAACGCAGGAc                                                                               <  6:319766/149‑1 (MQ=255)                                                                  ggTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAACGCAGGACGTAt                                                                           >  2:366955/1‑148 (MQ=255)                                                                   gTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAggacccgttcgcgataatcgaggtattgctgtatctgctcggcagtctctggaacgcggggcagcccga                                                                         <  5:9543‑M2/149‑70 (MQ=255)                                                                      cgcgATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAACGCAGGACGTATTCGa                                                                       >  4:195686/1‑148 (MQ=255)                                                                       gcgATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGa                                                                                                                               >  2:73637/1‑91 (MQ=255)                                                                       gcgATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAACGCAGGACGTATTCGac                                                                      >  6:70236/1‑148 (MQ=255)                                                                         gATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAggacccgttcgcgataatcgaggtattgctgtatctgctcggcagtctctggaacgcggggcagcccgatggact                                                                   >  6:9543‑M2/1‑74 (MQ=255)                                                                           ttCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAACGCAGGACGTATTCGACACTgg                                                                 <  8:86443/149‑1 (MQ=255)                                                                               agccagGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAACGCAGGACGTATTCGACACTGGTCAt                                                             >  3:76220/1‑149 (MQ=255)                                                                               agccagGCCAGCCGCCGCCTGCTTGTCCTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAACGCAg                                                                                  <  4:73798/128‑1 (MQ=255)                                                                                gccaggccagCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAACGCAGGACGTATTCGACACTGGTCAtt                                                            >  4:100337/1‑149 (MQ=255)                                                                                     gccagCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAACGCAGGACGTATTCGACACTGGTCATTCGGGc                                                       >  1:164568/1‑149 (MQ=255)                                                                                         gccgccgccTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAACGCAGGACGTATTCGACACTGGTCATTCGGGCCCAg                                                   >  5:252299/1‑149 (MQ=255)                                                                                          ccgccgccTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAACGCAGGACGTATTCGACACTGGTCATTCGGGCCCAgc                                                  <  1:366955/149‑1 (MQ=255)                                                                                           cgccgccTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAACGCAGGACGTATTCGACACTGGTCATTCGGGCCCAgct                                                 <  1:346856/149‑1 (MQ=255)                                                                                                ccTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAACGCAGGACGTATTCGACACTGGTCATTCGGGCCCAGCTGCTCa                                            <  8:279189/149‑1 (MQ=255)                                                                                                ccTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAACGCAGGACGTATTCGACACTGGTCATTCGGGCCCAGCTGCTCa                                            <  5:344936/149‑1 (MQ=255)                                                                                                ccTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAACGCAGGACGTATTCGACACTGGTCATTCGGGCCCAGCTGCTCa                                            <  2:164568/149‑1 (MQ=255)                                                                                                 cTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAACGCAGGACGTATTCGACACTGGTCATTCGGGCCCAGCTGCTCAg                                           >  4:178474/1‑149 (MQ=255)                                                                                                    cTTGTCGTCAGGCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAACGCAGGACGTATTCGACACTGGTCATTCGGGCCCAGCTGCTCAGt                                          <  8:152570/147‑1 (MQ=255)                                                                                                       gtcgtcAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAACAAAGCCACGAAACTAGCCAAGACCATTGAACGCAGGACGTATTCGCCACTGGTCCTTCGGGCCCAGCTGCTCAGTGAcgt                                     >  8:339338/1‑147 (MQ=255)                                                                                                          gtcagtcaGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAAGTAGCCAAGACCATTGAACGCAGGACGTATTCGACACTGGTCATTCGGGGCCAGCTGGTCAGTGAGCTGGc                                  >  4:66246/1‑149 (MQ=255)                                                                                                                  gCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGGCACGAAACTAGCCAAGAACATTGAACGCAGGACGTATTCGACACTGGTCATGCGGGCCCCGCTGCTCAGGGACCTGGCCTACCTCg                          >  4:33981/1‑149 (MQ=255)                                                                                                                      cTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAACGCAGGACGTATTCGACACTGGTCATTCGGGCCCAGCTGCTCAGTGACCTGGCCTACCTCGCtgt                      <  3:195686/149‑1 (MQ=255)                                                                                                                       tGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAACGCAGGACGTATTCGACACTGGTCATTCGGGCCCAGCTGCTCAGTGACCTGGCCTACCTCGCtgtg                     >  5:146056/1‑149 (MQ=255)                                                                                                                        ggatcggatcCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAACGCAGGACGTATTCGACACTGGTCATTCGGGCCCAGCTGCTCAGTGAc                                       >  5:240423/1‑130 (MQ=255)                                                                                                                        ggatcggatcCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAACGCAGGACGTATTCGACACTGGTCATTCGGGCCCAGCTGCTCAGTGAc                                       <  6:240423/130‑1 (MQ=255)                                                                                                                             ggatcCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAACGCAGGACGTATTCGACACTGGTCATTCGGGCCCAGCTGCTCAGTGACCTGGCCTACCTCGCTGTGGACaa                <  5:70236/148‑1 (MQ=255)                                                                                                                                 ccTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAACGCAGGACGTATTCGACACTGGTCATTCGGGCCCAGCTGCTCAGTGACCTGGCCTACCTCGCTGTGGACAAGAcc            <  4:76220/148‑1 (MQ=255)                                                                                                                                          aaCACTGCAggacccgttcgcgataatcgaggtattgctgtatctgctcggcagtctctggaacgcggggcagcccgatggactgtgcgctcagcgcctggtggtcgacctgctccagcaagcggcggcacagcagcatgtcgttttcg  >  3:86706‑M2/1‑9 (MQ=255)                                                                                                                                                 cAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTACCCAAGACCATTGAACGCAGGACGTATTCGACACTGGACATTCGGGCCCAGCTGCTCAGTGACCt                                     >  8:258142/1‑107 (MQ=255)                                                                                                                                                  |                                                                                                                                             ATCGGGCTGCCCCGCGTTCCAGAGACTGCCGAGCAGATACAGCAATACCTCGATTATCGCGAACGGGTCCGCGATTCCAGCCAGGCCAGCCGCCGCCTGCTTGTCGTCAGTCAGCGGCTGGATCGGATCCTGGCGGAAACACTGCAGGACCCCAAGATCGATTTTCCCAATAAAGCCACGAAACTAGCCAAGACCATTGAACGCAGGACGTATTCGACACTGGTCATTCGGGCCCAGCTGCTCAGTGACCTGGCCTACCTCGCTGTGGACAAGACCCGCCTCACTG  >  NC_002947/5709313‑5709598

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.