New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5734041	58 (0.980)	5 (0.090)	5/232	NT	8.6%	intergenic (‑67/+90)	proY/hutH	proline (histidine) APC transporter/histidine ammonia‑lyase
	?	NC_002947	= 5734096	54 (1.010)					intergenic (‑122/+35)	proY/hutH	proline (histidine) APC transporter/histidine ammonia‑lyase

CTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGAT‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCGG  >  NC_002947/5733951‑5734244                                                                                                                                                   |                                                                                                                                                      cTTGAGACCTTGCGCTTGTTGCATGCCACGCCCTTTAATTGTTTTTGTGGGCGTTAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCCCCCACCGGGGAT‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCgcc                                                                                                                                                    >  6:240323‑M2/1‑146 (MQ=255)    gagaCCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGCT‑GGTGTTTTGGACCAAATTCTGTGGGCGCGGGCCCgccccc                                                                                                                                                 <  3:284752‑M2/149‑7 (MQ=255)                       aTGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGACCCTTCGCGGGCCCGCCCGCTCCCACAGGGGAT‑GGTGTTTTGGACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGcc                                                                                                                             >  7:266011/1‑149 (MQ=255)                         gTCACGTCCTTGATTTGTTTTTGTGGGCGTGAGATTCTGGGGGCGGCGGCGCCGCCCCTTCGCGGGCACGCCCGCTCCCACCGGGGTG‑GGGGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGcc                                                                                                                             <  6:326903/147‑1 (MQ=255)                          tCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACCCCCCCGCCCACAGGGGAT‑GGTGTTTTTCCCCTACTTATGTGGGGGCGGGCGCGCCCGCGCAGGGCCGCCCCG‑CGGCCCCa                                                                                                                          >  4:111773/1‑149 (MQ=255)                             cGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACCCCCGCACCCCCAGGGGGT‑GGGGTTTTGCCCCGACTTCTGTGGGGGCGGGCGCGCCCGCGAAGGGCCGCCCCG‑CGGCCCCCggg                                                                                                                       >  8:14420/1‑149 (MQ=255)                                 cTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCCCTCCCACAGGGGAT‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGt                                                                                                                   >  2:19658/1‑149 (MQ=255)                                    gAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGAT‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTa                                                                                                                 <  3:114509/148‑1 (MQ=255)                                     aaTTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGAT‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTa                                                                                                                 >  2:266485/1‑147 (MQ=255)                                       ttGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCAACCACAGGGGAT‑GGTGTTTTTCACCTACTTCTGTGGGAGCGGGCGCGCCCCCGAAGGGCCGCCCAG‑CCGCCCCAGGGGCGTTAAAgg                                                                                                             >  7:227395/1‑149 (MQ=255)                                        tGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGGCCCCCCCCAACCCCAGGGGGTGGGGGTTTTGC‑CCGACGTGTGTGGGGGCGGGGGCGGCCCCGACGGGCCGCCCCGCCGGCCCCGGGGCCGttcacgc                                                                                                             >  8:258619/1‑144 (MQ=255)                                          tttttGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGAT‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCtt                                                                                                          >  8:114561/1‑149 (MQ=255)                                           ttttGTGGTCGTGAGATTCTGGGGGCTGCGGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACTGGGGAT‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCtt                                                                                                          <  1:142164/148‑1 (MQ=255)                                            tttGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGAT‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTgg                                                                                                        >  8:73782/1‑149 (MQ=255)                                             ttGGGGTCGGGAGATCCAGGGGGGGGCTGCGCCGCCCCTTCGCGGGCACGCCCGCTCCCCCTGGGGTT‑GGGGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTgg                                                                                                        <  7:14420/148‑1 (MQ=255)                                              tctgGTCGTCAGATTCCGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGTAT‑GGTGTTTTGCACCTACTTCTGTGGGAGGGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTgg                                                                                                        <  1:193318/145‑1 (MQ=255)                                                  gTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACCCCCCCACCCACACGGGAT‑TGTGTTTTGGACCGAATTAGGTGGGGGCCGGCCCCCCCCCGCACGGCCCCCCCC‑CCGCCCCCCGGGCGGTACAGGCGTgggcga                                                                                                    >  2:193318/1‑143 (MQ=255)                                                           ttCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGAT‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTgg                                                                                                        >  3:82730/1‑134 (MQ=255)                                                           ttCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGAT‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTgg                                                                                                        <  4:82730/134‑1 (MQ=255)                                                              aGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGAT‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGgca                                                                                       <  7:73782/148‑1 (MQ=255)                                                              aGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGAT‑GGTGTTTTCCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGgcag                                                                                      <  3:111773/149‑1 (MQ=255)                                                                ggggCTGCTGCGCAGCCCCTTCGCGGGCACGCCCCCACCCACAAGGGAT‑TGTGTTTTTGACCAAAATATTTGGGAGCGGGCGCCCCCCCGCAGGGCCGCCCCGCCGCCCCCCGGGGGGTTA‑ACGCGTGTCAGTAAACCCCCCcgccgc                                                                                     >  2:142519/1‑148 (MQ=255)                                                                   gctgctGCGCAGCCCCTTCGCGGGCACGCCCGCGCCCACAGGGGAT‑GGTGTTTTGCACCTACTTCTGGGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGc                                                                                 <  7:209312/149‑1 (MQ=255)                                                                      gctgcGCAGCCCCTTCGCGGGCACCCCAGCAGCCACACGGGAT‑GGTTTTTTGCACCGAATTCAGTCGCAGCGCGCCCCCCCGCCCAGGGCCCCCCAG‑CCGCCCCACCGGCGGGACAGGCGTGGCCGGACAACCGCCGCGAGCAAAcccg                                                                              >  6:316709/1‑147 (MQ=255)                                                                       ctgcGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGAT‑GGTGTTTTGCACCTACGTCTGTGGGCGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGt                                                                             >  3:114527/1‑149 (MQ=255)                                                                        tcgcacccccgTTCGGGGCCAGGCCCTCCCCCCCGGGGTTG‑GGTGTTTGCCACCACCTTCGGGGGCTGCGGCCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTc                                                                            <  7:131190/142‑1 (MQ=255)                                                                         gcgcAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGAT‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCa                                                                           <  7:114561/149‑1 (MQ=255)                                                                                          gCACGCCCGCTCCCACAGGGGAT‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCaa                                                           >  4:351093/1‑148 (MQ=255)                                                                                            aCGCCCGCTCCCACTGGGGAT‑GGTGTTTTCCACCTACTTCTGGGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAg                                                        <  8:64300/149‑1 (MQ=255)                                                                                                ccGCTCCCACAGGGGAT‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCGTCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTcc                                                    >  1:303657/1‑149 (MQ=255)                                                                                                    tCCCACAGGGGAT‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctc                                                               >  7:346516‑M2/1‑47 (MQ=255)                                                                                                    tCCCACAGGGGAT‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctc                                                               <  8:346516‑M2/135‑89 (MQ=255)                                                                                                     cccACAGGGGAT‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcggg                                                      <  5:203159‑M2/143‑98 (MQ=255)                                                                                                     cccACAGGGGAT‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcggg                                                      >  6:203159‑M2/1‑46 (MQ=255)                                                                                                      ccACAGGGGAT‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTgg                                                                                                        <  6:108884/91‑1 (MQ=255)                                                                                                      ccACAGGGGAT‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGcc                                              >  4:129508/1‑149 (MQ=255)                                                                                                      ccACAGGGGAT‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGc                                               <  1:19658/148‑1 (MQ=255)                                                                                                       cacaGGGGAT‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCa                                                                           >  2:223525/1‑119 (MQ=255)                                                                                                       cacaGGGGAT‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCa                                                                           <  1:223525/119‑1 (MQ=255)                                                                                                          aGGGGAT‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCtttt                                          <  2:303657/149‑1 (MQ=255)                                                                                                           ggggAT‑GGGGTTTTCCACCTACTTCTGGGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTc                                         <  7:258619/149‑1 (MQ=255)                                                                                                            gggtagggTGTTTTGAACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTc                                         <  8:266011/143‑1 (MQ=255)                                                                                                            gggAT‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGgcagca                                                                                    >  5:208908/1‑105 (MQ=255)                                                                                                            gggAT‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGgcagca                                                                                    <  6:208908/105‑1 (MQ=255)                                                                                                            gggAT‑GGTGTTTTGCACCTACTTCTGGGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGGAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCg                                        <  1:266485/149‑1 (MQ=255)                                                                                                                t‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCaa                                                           <  6:151195/126‑1 (MQ=255)                                                                                                                t‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCaa                                                           >  5:151195/1‑126 (MQ=255)                                                                                                                          gCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGt                                                      <  1:231924/122‑1 (MQ=255)                                                                                                                          gCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGt                                                      >  2:231924/1‑122 (MQ=255)                                                                                                                            aCCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTAcc                                                                    <  8:285313/106‑1 (MQ=255)                                                                                                                             ccTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCCATATCCGGCGCgaag                         >  3:139718/1‑148 (MQ=255)                                                                                                                              cTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCgaaga                        >  8:147948/1‑148 (MQ=255)                                                                                                                               tACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGaaa                      >  5:67466/1‑149 (MQ=255)                                                                                                                                aCTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTgg                                                                                                        >  7:137/1‑66 (MQ=255)                                                                                                                                aCTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTgg                                                                                                        <  8:137/66‑1 (MQ=255)                                                                                                                                 cTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCGTTTCGCTATCCGGCGCGAAGAAacg                    >  4:112866/1‑149 (MQ=255)                                                                                                                                   tCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggt                  >  2:296620/1‑149 (MQ=255)                                                                                                                                    cTGTGGGAGCGGGCGCgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaaaaagctcaaggtctcaagcgcgggctaagtgcccgccacatccgtttcatggccctcggc                  <  3:232326‑M2/149‑134 (MQ=255)                                                                                                                                       tgGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggtcacg              <  1:142519/149‑1 (MQ=255)                                                                                                                                       tgGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggtcacg              >  6:62546/1‑149 (MQ=255)                                                                                                                                           aGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCg          >  7:316878/1‑149 (MQ=255)                                                                                                                                                   cgcCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCgg  <  4:114527/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                      CTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGAT‑GGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAG‑CGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCGG  >  NC_002947/5733951‑5734244

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.