New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5903769	48 (0.810)	10 (0.180)	9/236	NT	14.4%	intergenic (+25/+82)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease
	?	NC_002947	= 5903831	75 (1.380)					intergenic (+87/+20)	PP_5176/spuH	hypothetical protein/spermidine/putrescine ABC transporter permease

GAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTGGCGGCTGAAGTACC  >  NC_002947/5903684‑5903978                                                                                                                                                      |                                                                                                                                                     gAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCg                                                                                                                                                      <  1:87964/148‑1 (MQ=255)         gATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGtgcccgcga                                                                                                                                             >  1:111465‑M2/1‑140 (MQ=255)         gATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGtgcccgcg                                                                                                                                              <  4:114628‑M2/148‑9 (MQ=255)           ttGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGTAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGaaa                                                                                                                                           <  8:194650/149‑1 (MQ=255)                      tATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATTCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAAGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGt                                                                                                                                  >  3:12460/1‑147 (MQ=255)                        tCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCCTGCCCGCTCCCCCAGGGCTCACCACAAACC‑AGAAGGCTGG‑GAGGTGCCGGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAgg                                                                                                                              >  5:2381/1‑149 (MQ=255)                        tCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAgg                                                                                                                              <  3:114628/149‑1 (MQ=255)                            ggACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGa                                                                                                                         >  1:229064/1‑149 (MQ=255)                              aCTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACg                                                                                                                       >  7:298302/1‑149 (MQ=255)                                  tCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGc                                                                                                                   >  3:56994/1‑149 (MQ=255)                                  tCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCCGGCAAGAACGCACCCACATGCCTCACCACAACCA‑TCAAAGCAGA‑GAAGGACCAGTTGGATCGGGCGTTGCCACGCAAGGGCCAGGTCAGG‑CCGAccaagc                                                                                                                   >  4:325702/1‑144 (MQ=255)                                   ccACATTGGTATGCGGTTTGGCTTTGAATCGGTGCTGGAGCGTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGtgc                                                                                                                                                   >  2:356959‑M2/1‑114 (MQ=255)                                   ccACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGtgc                                                                                                                                                   <  1:356959‑M2/117‑4 (MQ=255)                                     actttGGTATGGGGTATGGCTTTGAATCGGTGCTGGTGCCTTCGCGGGCATGCCGGCTCCCACTGGGCTCACCACAACCC‑TGATGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCAc                                                                                                                <  4:233801/146‑1 (MQ=39)                                     acaTTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGGCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCAc                                                                                                                >  7:328035/1‑149 (MQ=255)                                     acaTTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCAc                                                                                                                <  7:87732/149‑1 (MQ=255)                                       aTTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCt                                                                                                              <  8:245389/149‑1 (MQ=255)                                        ttGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCCCAGGGCTCACCACAACCCTTCATGGTCGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCt                                                                                                              <  1:113394/149‑1 (MQ=38)                                         tGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATTCCCCCAACCACACGGCAACCCACAACCC‑AGAAAGCAGT‑GAGGTACCAGTGGGGGCGGGCGGGCCCCCGAAAGGGCCAGGTAACG‑CCGCCGCCGCCACCAgc                                                                                                            >  4:173885/1‑149 (MQ=255)                                              tGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCgg                                                                                                       >  6:100759/1‑149 (MQ=255)                                                cGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCggg                                                                                                      <  1:235615/148‑1 (MQ=255)                                                       gCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGAc                                                                                              <  4:56994/149‑1 (MQ=255)                                                       gCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGAc                                                                                              <  8:328035/149‑1 (MQ=255)                                                         tttGAATGGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGATGGCTGT‑GTGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCt                                                                                            <  6:2381/149‑1 (MQ=255)                                                            gAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGTCCTGc                                                                                          <  5:100759/148‑1 (MQ=255)                                                            gAATCGGTGCTGCAGCCTGCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGc                                                                                          <  1:71534/148‑1 (MQ=255)                                                             aaTCGGTGCTGGAGCCTTCGCTGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCgg                                                                                        <  8:265143/149‑1 (MQ=255)                                                                cGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCt                                                                                      <  8:298302/148‑1 (MQ=255)                                                                 ggTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGc                                                                                    <  2:229064/149‑1 (MQ=255)                                                                         aGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGCCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGtt                                                                            <  3:325702/149‑1 (MQ=255)                                                                           ctttCGCGCGCACGCCCGCTCCCACAGGG‑ACCTCACAGCCT‑TCAGGGTTGTGGTGAGCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTgg                                                                          <  5:200971/147‑1 (MQ=14)                                                                              tCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGa                                                                                  <  8:351530/138‑1 (MQ=255)                                                                              tCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGa                                                                                  >  7:351530/1‑138 (MQ=255)                                                                                      aTGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCAcc                                                                >  2:181168/1‑148 (MQ=255)                                                                                        gCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCCCCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTgc                                                                      >  7:362700/1‑140 (MQ=255)                                                                                        gCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTgc                                                                      <  8:362700/140‑1 (MQ=255)                                                                                          ccGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGtgcccgcgaaggctccagcaccgattcaaagccataccgcatcccaatgtggatagtccctgatacttctgaccaatccagccctcaagg                                                            <  3:242370‑M2/149‑91 (MQ=255)                                                                                          ccGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCtt                                                           <  1:181168/149‑1 (MQ=255)                                                                                            gCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTgcagc                                                                   >  5:226551/1‑139 (MQ=255)                                                                                            gCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTgcagc                                                                   <  6:226551/139‑1 (MQ=255)                                                                                                ccACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGtgcccgcgaaagctccagcaccgattcaaagccataccgcatcccaatgtggatagtccctgatacttctgaccaatccagccctcaagggattgg                                                      <  2:336236‑M2/149‑97 (MQ=255)                                                                                                ccACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCg                                                     >  2:18298/1‑149 (MQ=255)                                                                                                 cacaGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGtgcccgcgaaggctccagcaccgattcaaagccataccgcatcccaatgtggatagtccctgatacttctgaccaatccagccctcaagggattgg                                                      <  6:159631‑M2/148‑97 (MQ=255)                                                                                                 cacaGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCGGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGc                                                    >  6:13836/1‑149 (MQ=255)                                                                                                 cacaGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCCtgcccgctaaggctccagcaccgattcaaagccataccgcatcccaaagtggatagtccctgatacttctgaccaatccagccctcaagggattgg                                                      <  6:375646‑M2/148‑97 (MQ=255)                                                                                                  acaGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGtgcccgcgaaggctccagcaccgattcaaagccataccgcatcccaatgtggatagtccctgatacttctgaccaatccag                                                                     <  5:216575‑M2/132‑82 (MQ=255)                                                                                                  acaGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGtgcccgcgaaggctccagcaccgattcaaagccataccgcatcccaatgtggatagtccctgatacttctgaccaatccag                                                                     >  6:216575‑M2/1‑51 (MQ=255)                                                                                                      ggCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGtgcccgcgaaggctccagcaccgattcaaagccataccgcatcccaatgtggatagtccctgatacttctgaccaatccagccctcaagggattggcaacaa                                                >  4:242370‑M2/1‑47 (MQ=255)                                                                                                      ggCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCAtgcccgcgaaggctccagcaccgattcaaagccataccgcatcccaatgtggatagtcc                                                                                           >  6:129497‑M2/1‑47 (MQ=255)                                                                                                           accacAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGtgcccgcgaaggctccagcaccgattcaaagccataccgcatcccaatgtggatagtccctgatacttctgaccaatccagccctcaagggattggcaacaatgtac                                           <  1:79540‑M2/149‑108 (MQ=255)                                                                                                           accacAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGtt                                                                            <  4:253659/115‑1 (MQ=255)                                                                                                           accacAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGtt                                                                            >  3:253659/1‑115 (MQ=255)                                                                                                           accacAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCtt                                                           <  6:154038/132‑1 (MQ=255)                                                                                                           accacAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCtt                                                           >  5:154038/1‑132 (MQ=255)                                                                                                           accacAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATc                                          >  3:225888/1‑149 (MQ=255)                                                                                                            ccacAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAAtag                                         >  3:336764/1‑147 (MQ=255)                                                                                                            ccacAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCg                                         >  7:290085/1‑149 (MQ=255)                                                                                                              acaACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGcc                                       >  3:285853/1‑149 (MQ=255)                                                                                                               caACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCg                                                                                   <  4:126644/104‑1 (MQ=255)                                                                                                               caACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGATTGACCTGCGGATGCg                                                                                   >  3:126644/1‑104 (MQ=255)                                                                                                                aaCCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCtt                                     >  5:96722/1‑149 (MQ=255)                                                                                                                  ccc‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCtt                                     <  8:290085/147‑1 (MQ=255)                                                                                                                  ccc‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGc                                   >  1:13079/1‑149 (MQ=255)                                                                                                                  ccc‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCCGAATCGcc                                       <  5:273127/145‑1 (MQ=255)                                                                                                                  ccc‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCCGAATCGcc                                       >  6:273127/1‑145 (MQ=255)                                                                                                                   cc‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGcc                                                                                                                                      >  4:43548/1‑50 (MQ=255)                                                                                                                   cc‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGcg                                  <  4:225888/149‑1 (MQ=255)                                                                                                                   cc‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGc                                   >  3:223130/1‑148 (MQ=255)                                                                                                                          ggCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGc                                                                         >  1:230083/1‑104 (MQ=255)                                                                                                                          ggCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGc                                                                         <  2:230083/104‑1 (MQ=255)                                                                                                                             tgt‑gAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGct                          >  4:167422/1‑148 (MQ=255)                                                                                                                                  aGGTCCCTGTGGGAGCGGGCGtgcccgcgaaagctccagcaccgattcaaagccataccgcatcccaatgtggatagtccctgatacttctgaccaatccagccctcaagggattggcaacaatgtaccgggctacatgaaccacaca                       >  1:336236‑M2/1‑21 (MQ=255)                                                                                                                                  aGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAAt                                           <  5:91477/127‑1 (MQ=255)                                                                                                                                  aGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAAt                                           >  6:91477/1‑127 (MQ=255)                                                                                                                                  aGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCg                     <  4:223130/149‑1 (MQ=255)                                                                                                                                    gTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGc                                                                                    >  6:359073/1‑84 (MQ=255)                                                                                                                                    gTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGc                   >  6:78892/1‑149 (MQ=255)                                                                                                                                      cccggggggAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCt                 <  8:59580/143‑1 (MQ=255)                                                                                                                                       ccTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCg                                                                                                        >  4:41069/1‑61 (MQ=255)                                                                                                                                       ccTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCg                                                                                                        <  3:41069/61‑1 (MQ=255)                                                                                                                                       ccTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTg                >  4:230214/1‑149 (MQ=255)                                                                                                                                         tgtgGGCGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTggc              <  1:142256/149‑1 (MQ=255)                                                                                                                                           tgGGAGGGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTggcgg            <  3:173885/149‑1 (MQ=255)                                                                                                                                           tgGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGGTCCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGGCTTGCGACGACGCTCTTCGGCCTggcg             >  1:61446/1‑149 (MQ=255)                                                                                                                                           tgGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTc                      <  4:237267/139‑1 (MQ=255)                                                                                                                                           tgGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTc                      >  3:237267/1‑139 (MQ=255)                                                                                                                                           tgGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTggcgg            >  1:109865/1‑149 (MQ=255)                                                                                                                                           tgGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTggcgg            <  4:12460/149‑1 (MQ=255)                                                                                                                                           tgGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTggcgg            >  2:336507/1‑149 (MQ=255)                                                                                                                                             ggAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCTATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTggcggc           <  2:13079/148‑1 (MQ=255)                                                                                                                                                 cGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCGGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTGGCGGCTGAAg      <  5:13836/149‑1 (MQ=255)                                                                                                                                                      gtgcccgcgaaggctccagcaccgattcaaagccataccgcatcccaatgtggatagtccctgatacttctgaccaatccagccctcaagggattggcaacaatgtaccgggctacatgaaccacacactcttcctgccgcagcgcatg  >  2:79540‑M2/1‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                     GAGGGCTGGATTGGTCAGAAGTATCAGGGACTATCCACATTGGGATGCGGTATGGCTTTGAATCGGTGCTGGAGCCTTCGCGGGCATGCCCGCTCCCACAGGGCTCACCACAACCC‑TGAAGGCTGT‑GAGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCAGGTCAGG‑CCGACGCAGCCACCTGCGCCGGGCGCTTGACCTGCGGCTGCGAAGCGTTGGCTGCAGCACCCTCTTCGATCGCCTGCTGAATCGCCTTGCGACGACGCTCTTCGGCCTGGCGGCTGAAGTACC  >  NC_002947/5903684‑5903978

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.