| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_002947 | 5,985,398 | Δ11 bp | coding (188‑198/405 nt) | PP_5244 ← | AraC family transcriptional regulator |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_002947 | 5985398 | 5985408 | 11 | 39 [0] | [0] 39 | PP_5244 | AraC family transcriptional regulator |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5985397 | 0 (0.000) | 38 (1.490) | 34/286 | 0.0 | 100% | coding (199/405 nt) | PP_5244 | AraC family transcriptional regulator |
| ? | NC_002947 | 5985409 = | 0 (0.000) | coding (187/405 nt) | PP_5244 | AraC family transcriptional regulator | |||||
ATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGGCGCCAGGCCTGCGGCGAAAGGCCGGTGTTGACTTTGAACGCGCGGGAAAAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACAT > NC_002947/5985263‑5985553 | gcacgggtgaaatgggcctggtcacaaaagccgcattccaggctcacgtgggtgataggcgcctcggttgcaagcaagcgcttggccttttccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaaa > 7:64101‑M2/147‑148 (MQ=255) acgggtgaaatgggcctggtcacaaaagccgcattccaggctcacgtgggtgataggcgcctcggttgcaagcaagcgcttggccttttccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATg > 3:103353‑M2/145‑148 (MQ=255) gggtgaaatgggcctggtcacaaaagccgcattccaggctcacgtgggtgataggcgcctcggttgcaagcaagcgcttggccttttccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGc > 8:14581‑M2/143‑148 (MQ=255) acaaaagccgcattccaggctcacgtgggtgataggcgcctcggttgcaagcaagcgcttggccttttccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGCGGGTAAGGTTGCATAc > 5:120169‑M2/124‑148 (MQ=255) acaaaagccgcattccaggctcacgtgggtgataggcgcctcggttgcaagcaagcgcttggcctttccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGATGCGGGTAAGGTTGCATAcc > 2:75187‑M2/123‑148 (MQ=255) aaaagccgcattccaggctcacgtgggtgataggcgcctcggttgcaagcaagcgcttggccttttccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGCGGGTAAGGTTGCATACcg > 1:58218‑M2/122‑148 (MQ=255) aaagccgcattccaggctcacgtgggtgataggcgcctcggttgcaagcaagcgcttggccttttccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGCGGGTAAGGTTGCATACcgc > 7:59515‑M2/121‑148 (MQ=255) attccaggctcacgtgggtgataggcgcctcggttgcaagcaagcgcttggccttttccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGCGGGTAAGGTTGCATACCGCGGCGAtct < 2:82876‑M2/36‑1 (MQ=255) caggctcacgtgggtgataggcgcctcggttgcaagcaagcgcttggccttttccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCga < 7:62486‑M2/39‑1 (MQ=255) ctcacgtgggtgataggcgcctcggttgcaagcaagcgcttggccttttccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATc < 5:52936‑M2/44‑1 (MQ=255) acgtgggtgataggcgcctcggttgcaagcaagcgcttggccttttccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGa > 6:66867‑M2/102‑147 (MQ=255) gtgataggcgcctcggttgcaagcaagcgcttggccttttccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACggg < 3:22121‑M2/53‑1 (MQ=255) tgataggcgcctcggttgcaagcaagcgcttggccttttccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGc < 1:87087‑M2/54‑1 (MQ=255) taggcgcctcggttgcaagcaagcgcttggccttttccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGCGGGTAAGGTTGCATACCgcgg > 6:66921‑M2/92‑121 (MQ=255) taggcgcctcggttgcaagcaagcgcttggccttttccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTAt < 2:68647‑M2/57‑1 (MQ=255) taggcgcctcggttgcaagcaagcgcttggccttttccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTAt < 5:58628‑M2/57‑1 (MQ=255) aggcgcctcggttgcaagcaagcgcttggccttttccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGCGGGTAAGGTTGCATACCgcggc < 5:66921‑M2/31‑1 (MQ=255) gcgcctcggttgcaagcaagcgcttggccttttccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCa > 6:85906‑M2/89‑148 (MQ=255) ttgcaagcaagcgcttggccttttccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCt > 8:33000‑M2/80‑148 (MQ=255) aagcaagcgcttggccttttccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCtt > 8:94413‑M2/76‑148 (MQ=255) caagcgcttggccttttccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGCGGTTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGc < 2:96473‑M2/76‑1 (MQ=255) gcgcttggccttttccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCg > 1:126085‑M2/70‑148 (MQ=255) gcttggccttttccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGCGGGTAAGGGTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGgc < 3:40624‑M2/81‑1 (MQ=255) cttttccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCcg > 5:33485‑M2/61‑148 (MQ=255) ttttccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGTGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATc > 2:93776‑M2/60‑124 (MQ=255) ttttccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCcgc > 5:74282‑M2/60‑148 (MQ=255) tttccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGTGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCa < 1:93776‑M2/66‑1 (MQ=255) ccatgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGa > 2:10230‑M2/56‑101 (MQ=255) cttgcgcgccagcaggcgacaggcctgcggcgaaaggccggtgttgactttgaaAATGGCGGCGGGTAAGGTTGCATCCCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCgg < 6:114820‑M2/93‑1 (MQ=255) catgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGAc < 1:10230‑M2/47‑1 (MQ=255) catgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCggg > 6:22763‑M2/55‑148 (MQ=255) atgcgcgccagcaggcgccaggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGc > 1:13527‑M2/54‑148 (MQ=255) gcgccaggcctgcggcgaaaggccggtgtggactttgaaAATGGCTGCGGGTAAGGTGGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTCGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCggg < 5:99644‑M2/109‑1 (MQ=255) caggcctgcggcgaaaggccggtgttgactttgaaAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGtt > 4:59038‑M2/36‑148 (MQ=255) aaaggccggtgttgactttgaaAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCtt > 4:55587‑M2/23‑148 (MQ=255) aaaggccggtgttgactttgaaAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCtt > 1:150091‑M2/23‑148 (MQ=255) actttgaaAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAgg < 1:119167‑M2/139‑1 (MQ=255) ctttgaaAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAggg < 7:100398‑M2/140‑1 (MQ=255) aaAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACAt < 2:58218‑M2/145‑1 (MQ=255) | ATGGGCCTGGTCACAAAAGCCGCATTCCAGGCTCACGTGGGTGATAGGCGCCTCGGTTGCAAGCAAGCGCTTGGCCTTTTCCATGCGCGCCAGCAGGCGCCAGGCCTGCGGCGAAAGGCCGGTGTTGACTTTGAACGCGCGGGAAAAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACAT > NC_002947/5985263‑5985553 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |