| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_002947 | 5,681,415 | +CGGG | intergenic (‑133/+71) | PP_4986 ← / ← PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5681415 | 1 (0.020) | 39 (0.660) +CGGG |
32/276 | 1.3 | 97.6% | intergenic (‑133/+71) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| ? | NC_002947 | 5681416 = | 1 (0.020) | intergenic (‑134/+70) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein | |||||
CGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCGCTGCTGCGCAGCCCTAT‑‑CGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTC > NC_002947/5681273‑5681545 | cgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgcaactgcatgaaccgccggggc > 4:57466‑M2/148‑149 (MQ=255) acatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtagagaaaggggcgccaagcggcccccggctttcaatgccacagcatgaaccgcccggGCagcagc > 8:267094‑M2/142‑149 (MQ=255) catgcaaacacagacctcctgaggtgggctgggttcctgttgggatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCtgctgc < 2:85548‑M2/8‑1 (MQ=255) atgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTgcgc > 7:261667‑M2/140‑149 (MQ=255) tgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCa < 5:206801‑M2/11‑1 (MQ=255) aaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttgatttccactgcatgaaccgccgggGCTGCTGCgccgcc > 5:126466‑M2/136‑149 (MQ=255) aaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGcc > 7:202561‑M2/136‑149 (MQ=255) aacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcaagaaccgccgggGCTGCTGCGCAGcc > 8:242478‑M2/135‑148 (MQ=255) acagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCGCAGCAgcccc < 1:347787‑M2/16‑2 (MQ=255) acagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCGCAGCAgcccc > 2:347787‑M2/132‑146 (MQ=255) ctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttcttgtgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCgcagcagccccggcggt > 1:83950‑M2/127‑141 (MQ=255) cctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaatggggcgcgaagcggccccaggctttcattgccactgcatgaaccgcctggGCTGCTGCGCAGCCCTAT‑‑CGCGa < 7:169257‑M2/23‑1 (MQ=255) gaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccgtgtgtcgcgaaacgggcgcgaagcgggcccaggctttaatagccacagcatgaaccgccggcGCTGCTAGGCAgcaccat‑‑ggcggcgcacg > 2:355355‑M2/121‑142 (MQ=255) tgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggcccccggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTAT‑‑CGCGACACAAGGCCGCTCCCACTCCAGaccacc > 6:74918‑M2/99‑149 (MQ=255) ttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCCGCCCTAT‑‑AGCCACAAAAGGCCGCTCCCACACCAGACCACCAGGCCCAGCGcc > 2:75889‑M2/86‑148 (MQ=255) ttcgttctttgtgggagcggccttgtgtagcgaaaggggcgcgaagcggccccacgctttaatttcccctgcatgaaccgccgggGCTGCTGCGCAGCCCTAT‑‑AGCGACACAACGCCCCACCCACAACAGACCACCACGCCCAGCgccg > 4:285382‑M2/86‑148 (MQ=255) tttggggcagcggccttgtggcgctaaaggggcgcgaagcggccccaggctttcattgccactgcattaacccccgggGCTGCTGCGCAGCCCTAT‑‑CGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATc < 3:288234‑M2/70‑1 (MQ=255) tgtgggagcggcgttgtgtcgcgaacggggcgcgacgcggccccagggtttcattgccactgcatgaaccgccgggGGTGCGGCGCAGCCCTAT‑‑CCCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATc < 7:324261‑M2/70‑1 (MQ=255) tgGTAGCGCCCTTGTGTCCGCAACGGGGCCCTAACGGGCCCAAGCATTTCATTCCAACTGCATGACCCCCCGGGGCTGCTGCCCAGCCCTAT‑‑CGCTAAAAATGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACACCCTaa < 7:319862/148‑1 (MQ=255) gggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTAT‑‑AGCGCCACCAGGCCGGGGCCACTCCAGACCACCCGGCCCTGCGCCGCACCTACTAAc > 7:210969‑M2/74‑148 (MQ=255) ccttgtgtcgctaatggggcgctaagcggcccaaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTAT‑‑CGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAg < 3:285382‑M2/84‑1 (MQ=255) ccttgtgtcgcgaatggggcgctaagcggccccaggctttaattcccactgaattaaccgccgggGCTGCTGCGCAGCCCTAT‑‑CGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAg < 1:75889‑M2/84‑1 (MQ=255) gtgtgggcgcgaaaggggcgcgaagcggcccctggatttcattgccactgaattaaccgccgggGCTGCTGCGCAGCCCTAT‑‑CGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg < 7:242478‑M2/85‑1 (MQ=255) cttgtgtcgcgaaaggggcgcgtagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCCCTCTAAAAAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCa < 1:285773‑M2/85‑1 (MQ=255) tcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTAT‑‑CGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTg > 3:253021‑M2/59‑146 (MQ=255) gaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTAT‑‑CGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTgc < 8:318164‑M2/60‑1 (MQ=255) gaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTAT‑‑CGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTgc > 7:318164‑M2/55‑114 (MQ=255) gcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCACTAA‑‑CGCGACACAAGGCCGCTACCCCTCCACACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTAAGGTTTCAGATccccgtacacc > 8:264418‑M2/46‑144 (MQ=255) gaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTAT‑‑CGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCAc < 4:253021‑M2/106‑1 (MQ=255) gcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTAT‑‑CGCGACACAAGGCCGCTCACACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTAAGGTTGCAGATCCGCGTCACGCACCAg > 2:75329‑M2/41‑149 (MQ=255) ccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTAT‑‑CGCGACACAAGGCCGCTCCCACTCCAGACCACCCCGCCCTGCGCCTCAAATACAAACCAAGGTCAGTTAGCAGATCCGCCTGCAGCACCACCCtt > 8:62605‑M2/37‑149 (MQ=255) gctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTAT‑‑CGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGt < 6:361262‑M2/81‑1 (MQ=255) gctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTAT‑‑CGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGt > 5:361262‑M2/31‑111 (MQ=255) gctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTAT‑‑CGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAAt < 7:117166‑M2/119‑1 (MQ=255) attgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTAT‑‑CGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGAc > 7:213860‑M2/25‑148 (MQ=255) tggccactgcatgaaccgccgggGCTGCTGCGCAGCCATAT‑‑CGCTACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCa < 3:57466‑M2/126‑1 (MQ=255) ccactgcatgaaccgccgggGCTGCTGCGCAGCCCTAT‑‑CGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGt < 7:267094‑M2/129‑1 (MQ=255) cactgcatgaaccgccgggGCTGCTTCGCAGCCCTAT‑‑CGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTc < 7:264418‑M2/130‑1 (MQ=255) cactgcatgaaccgccgggGCTGCTGCGCAGCCCTAT‑‑CGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTc < 8:213860‑M2/130‑1 (MQ=255) ccgccgggGCTGCTGCGCAGCCCTAT‑‑CGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGATGCAGATCCGCGTCACGCACCAGCCttt < 1:203996‑M2/114‑1 (MQ=255) | CGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACC‑‑‑‑GCGCTGCTGCGCAGCCCTAT‑‑CGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTC > NC_002947/5681273‑5681545 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |