| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 11719 | 63 (1.050) | 4 (0.070) | 4/252 | NT | 6.2% | coding (617/1104 nt) | dnaN | DNA polymerase III subunit beta |
| ? | NC_002947 | = 11774 | 61 (1.070) | coding (672/1104 nt) | dnaN | DNA polymerase III subunit beta | |||||
CTCAACGGCATGCTGCTTGAGGTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/11565‑11719‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgcgGATGTGATGCTGGCCCAGCACGATGCTGACCATACCTTCAGGATCGGTCAGCAGGCGCGCCAACTCCAGGATACCTTTACGCGGCACGATGACCTGGTGTCGATCCTCCTGCTCGATCGGCGCGCTCATCGAGCAAAGCGCCAGGCGG < NC_002947/11774‑11627 CTCAACGGCATGCTGCTTGAGGTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTT > 2:90603/1‑149CTCAACGGCATGCTGCTTGAGGTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTT < 5:160182/149‑1 AGGTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGC < 5:229945/135‑1 AGGTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGC > 6:229945/1‑135 ACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGGATGTGATGCTGGCCCAGCACGATGCTGACCATACCTTCAGGATCGGTCAGCAGG > 7:303336/1‑149 CTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGGATGTGATGCTGGCCCAGCACGATGCTGACCATACCTTCAGGATCGGTCAGCAGGCGCGC > 2:57105/1‑149 CGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGGATGTGATGCTGGCCCAGCACGATGCTGACCATACCTTCAGGATCGGTCAGCAGGCGCGCCAAC < 8:303336/149‑1 CTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCGGATGTGATGCTGGCCCAGCACGATGCTGACCATACCTTCAGGATCGGTCAGCAGGCGCGCCAACTC < 1:57105/149‑1 GCGCGGATGTGATGCTGGCCCAGCACGAAGCTGACCATACCTTCAGGAACGGTCAGCAGGCGCGCCAACTACAGGATACCTTTACGCGGCACGATGACCTGGTGTCGATCCTCCTGCTCGATCGGCGCGCTCATCGAGCAAAGCGCCAG > 1:273736/1‑149 GCGGATGTGATGCTGGCCCAGCACGATGCTGACCATACCTTCAGGATCGGTCAGCAGGCGCGCCAACTCCAGGATACCTTTACGCGGCACGATGACCTGGTGTCGATCCTCCTGCTCGATCGGCGCGCTCATCGAGCAAAGCGCCAGGC > 8:49041/1‑149 GCGGATGTGATGCTGGCCCAGCACGATGCTGACCATACCTTCAGGATCGGTCAGCAGGCGCGCCAACTCCAGGATACCTTTACGCGGCACGATGACCTGGTGTCGATCCTC < 5:39898/111‑1 GCGGATGTGATGCTGGCCCAGCACGATGCTGACCATACCTTCAGGATCGGTCAGCAGGCGCGCCAACTCCAGGATACCTTTACGCGGCACGATGACCTGGTGTCGATCCTC > 6:39898/1‑111 GCGGATGTGATGCTGGCCCAGCACGATGCTGACCATACCTTCAGGATCGGT < 7:340503/51‑1 GCGGATGTGATGCTGGCCCAGCACGATGCTGACCATACCTTCAGGATCGGT > 8:340503/1‑51 CGGATTGGATGCTGGCCCAGCACGATGCTGACCATACCTTCAGGATCGGTCAGCAGGCGCGCCAACTCCAGGATACCTTTACGCGGCACGATGACCTGGTGTCGATCCTCCTGCTCGATCGGCGCGCTCATCGAGCAAAGCGCCAGGCG < 7:57267/149‑1 GGATGTGATGCTGGCCCAGCACGATGCTGACCATACCTTCAGGATCGGTCAGCAGGCGCGCCAACTCCAGGATACCTTTACGCGGCACGATGACCTGGTGTCGATCCTCCTGCTCGATCGGCGCGCTCATCGAGCAAAGCGCCAGGCGG < 7:183863/149‑1 CTCAACGGCATGCTGCTTGAGGTTTCCCGCAACACGTTGCGCGCTGTATCCACCGACGGTCACCGCCTGGCGCTTTGCTCGATGAGCGCGCCGATCGAGCAGGAGGATCGACACCAGGTCATCGTGCCGCGTAAAGGTATCCTGGAGTTGGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/11565‑11719‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgcgGATGTGATGCTGGCCCAGCACGATGCTGACCATACCTTCAGGATCGGTCAGCAGGCGCGCCAACTCCAGGATACCTTTACGCGGCACGATGACCTGGTGTCGATCCTCCTGCTCGATCGGCGCGCTCATCGAGCAAAGCGCCAGGCGG < NC_002947/11774‑11627 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |