New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 328792 = | 58 (0.960) | 3 (0.050) | 3/254 | NT | 5.1% | coding (458/1368 nt) | PP_0270 | sensor histidine kinase |
? | NC_002947 | 328844 = | 57 (0.990) | coding (406/1368 nt) | PP_0270 | sensor histidine kinase |
GCAGGCCCTGAAGTACGAGCTGGGGCATGCCCAGGACGTACGCCTGATGCACGTGCAACTCACCGACGAGCTGGGCCAGCCGATCGTCTGGCGCAGCCTGTTCGGCCTGCGCACGGCCCAGGCGCATATCCAGTTCGCGGTGCCGCTGGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/328944‑328792 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgaACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGC > NC_002947/328844‑328989 GCAGGCCCTGAAGTACGAGCTGGGGCATGCCCAGGACGTACGCCTGATGCACGTGCAACTCACCGACGAGCTGGGCCAGCCGATCGTCTGGCGCAGCCTGTTCGGCCTGCGCACGGCCCAGGCGCATATCCAGTTCGCGGTGCCGCTGG < 1:335438/149‑1 GCAGGCCCTGAAGTACGAGCTGGGGCATGCCCAGGACGTACGCCTGATGCACGTGCAACTCACCGACGAGCTGGGCCAGCCGATCGTCTGGCGCAGCCTGTTCGGCCTGCGCACGGCCCAGGCGCATATCCAGTTCGCGGTGCCGCTGG < 4:273232/149‑1 CTGTTCGGCCTGCGCACGGCCCAGGCGCATATCCAGTTCGCGGTGCCGCTGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTT > 3:15063/1‑147 TGTTCGGCCTGCGCACGGCCCAGGCGCATATCCAGTTCGCGGTGCCGCTGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAG > 8:38660/1‑149 TTCGGCCTGCGCACGGCCCAGGCGCATATCCAGTTCGCGGTGCCGCTGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGG < 7:38660/148‑1 CGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTAATTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGC > 2:66387/1‑149 GCAGGCCCTGAAGTACGAGCTGGGGCATGCCCAGGACGTACGCCTGATGCACGTGCAACTCACCGACGAGCTGGGCCAGCCGATCGTCTGGCGCAGCCTGTTCGGCCTGCGCACGGCCCAGGCGCATATCCAGTTCGCGGTGCCGCTGGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/328944‑328792 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgaACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTGCCCGCGGCGCTCGTCATGC > NC_002947/328844‑328989 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |