New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	328792 =	58 (0.960)	3 (0.050)	3/254	NT	5.1%	coding (458/1368 nt)	PP_0270	sensor histidine kinase
	?	NC_002947	328844 =	57 (0.990)					coding (406/1368 nt)	PP_0270	sensor histidine kinase

GCACAGGCGCACGGCAACCAGGCACACCAGCAACACCGCGACGATGCGCAGCGCATACACCCGCAGCAGGTAATCGCTGATCAGCACCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGG  >  NC_002947/328644‑328939                                                                                                                                                     |                                                                                                                                                    gCACAGGCGCACGGCAACCAGGCACACCAGCAACACCGCGACGATGCGCAGCGCATACACCCGCAGCAGGTAATCGCTGATCAGCACCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCAt                                                                                                                                                     >  8:5306/1‑149 (MQ=255)   gcatgacgagcgccgcgggcacaggcgggtcgagctgttgttgcagcaggccctgaattacgagctggggcatgcccaggacgtacgcctgatgcacgtgcaactcaccgacgagctgggccagccgatcgtctggcgcagcctgtTCg                                                                                                                                                   >  2:66387‑M1/147‑149 (MQ=255)         gcACGGCAACCAGGCACACCAGCAACACCGCGACGATGCGCAGCGCATACACCCGCAGCAGGTAATCGCTGATCAGCACCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGc                                                                                                                                             >  5:176531/1‑149 (MQ=255)                   cAGGCACACCAGCAACACCGCGACGATGCGCAGCGCATACACCCGCAGCAGGTAATCGCTGATCAGCACCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGa                                                                                                                                   <  6:176531/149‑1 (MQ=255)                      gCACACCAGCAACACCGCGACGATGCGCAGCGCATACACCCGCAGCAGGTAATCGCTGATCAGCACCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACt                                                                                                                                <  7:34900/149‑1 (MQ=255)                         cacCAGCAACACCGCGACGATGCGCAGCGCATACACCCGCAGCAGGTAATCGCTGATCAGCACCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGa                                                                                                                             <  3:341447/149‑1 (MQ=255)                          acCAGCAACACCGCGACGATGCGCAGCGCATACACCCGCAGCAGGTAATCGCTGATCAGCACCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGa                                                                                                                             >  4:136272/1‑148 (MQ=255)                            cAGCAACACCGCGACGATGCGCAGCGCATACACCCGCAGCAGGTAATCGCTGATCAGCACCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGatat                                                                                                                          >  7:142621/1‑149 (MQ=255)                            cAGCAACACCGCGACGATGCGCAGCGCATACACCCGCAGCAGGTAATCGCTGATCAGCACCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGatat                                                                                                                          >  3:257104/1‑149 (MQ=255)                            cAGCAACACCGCGACGATGCGCAGCGCATACACCCGCAGCAGGTAATCGCTGATCAGCACCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGatat                                                                                                                          >  2:19436/1‑149 (MQ=255)                             aGCAACACCGCGACGATGCGCAGCGCATACACCCGCAGCAGGTAATCGCTGATCAGCACCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATg                                                                                                                         <  7:5306/149‑1 (MQ=255)                                 acacCGCGACGATGCGCAGCGCATACACCCGCAGCAGGTAATCGCTGATCAGCACCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGcc                                                                                                                     <  2:303862/149‑1 (MQ=255)                                      gcgACGATGCGCAGCGCATACACCCGCAGCAGGTAATCGCTGATCAGCACCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGc                                                                                                                <  3:257026/149‑1 (MQ=255)                                        gacgaTGCGCAGCGCATACACCCGCAGCAGGTAATCGCTGATCAGCACCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCg                                                                                                              >  7:130773/1‑149 (MQ=255)                                                gcagcgcaTACACCCGCAGCAGGTAATCGCTGATCAGCACCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAgg                                                                                                      >  8:64411/1‑149 (MQ=255)                                                  agcgcaTACACCCGCAGCAGGTAATCGCTGATCAGCACCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGcc                                                                                                    <  5:247756/149‑1 (MQ=255)                                                      cctgaagtacgagctggggcatgcccaggacgtacgcctgatgcacgtgcaactcaccgacgagctgggccagccgatcgtctggcgcagcctgtTCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGaa                                                                                                 <  7:38660‑M1/53‑1 (MQ=255)                                                       ctgaagtacgagctggggcatgcccaggacgtacgcctgatgcacgtgcaactcaccgacgagctgggccagccgatcgtctggcgcagcctgtTCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACa                                                                                               >  8:38660‑M1/95‑149 (MQ=255)                                                       aTACACCCGCAGCAGGTAATCGCTGATCAGCACCCTGGACGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACa                                                                                               <  4:231789/149‑1 (MQ=255)                                                        tACACCCGCAGCAGGTAATCGCTGATCAGCACCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAg                                                                                              <  1:141141/149‑1 (MQ=255)                                                          cacCCGCAGCAGGTAATCGCTGATCAGCACCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAgg                                                                                             <  8:130773/148‑1 (MQ=255)                                                          aagtacgagctggggcatgcccaggacgtacgcctgatgcacgtgcaactcaccgacgagctgggccagccgatcgtctggcgcagcctgtTCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAg                                                                                              >  3:15063‑M1/92‑147 (MQ=255)                                                           acCCGCAGCAGGTAATCGCTGATCAGCACCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCt                                                                                           >  6:239933/1‑149 (MQ=255)                                                             ccGCAGCAGGTAATCGCTGATCAGCACCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTgc                                                                                         <  2:81927/149‑1 (MQ=255)                                                             ccGCAGCAGGTAATCGCTGATCAGCACCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTgc                                                                                         <  4:52216/149‑1 (MQ=255)                                                                    agGTAATCGCTGATCAGCACCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTg                                                                                                            <  7:180344/123‑1 (MQ=255)                                                                    agGTAATCGCTGATCAGCACCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTg                                                                                                            >  8:180344/1‑123 (MQ=255)                                                                             cTGATCAGCACCCAGGCCGACTCGCCGCGCCAGCCCTGCAGTTCCTGGCCCGCCACGGTGAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTg                                                                         <  8:318842/149‑1 (MQ=255)                                                                                aTCAGCACCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTgg                                                                        <  4:92331/147‑1 (MQ=255)                                                                                    gCACCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGc                                                                  <  8:142621/149‑1 (MQ=255)                                                                                     cACCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCt                                                                 >  8:74944/1‑149 (MQ=255)                                                                                      aCCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCtc                                                                >  7:297702/1‑149 (MQ=255)                                                                                       cccAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCtcg                                                               >  3:369114/1‑149 (MQ=255)                                                                                         cAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCtcgtc                                                             <  4:257104/149‑1 (MQ=255)                                                                                              cGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTgcg                                                                                        <  4:116282/117‑1 (MQ=255)                                                                                              cGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTgcg                                                                                        >  3:116282/1‑117 (MQ=255)                                                                                              cGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCAACGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGt                                                          >  3:31180/1‑147 (MQ=255)                                                                                                    gccgcTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCTGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCACCAGACGATCgg                                                                            >  6:195836/1‑123 (MQ=255)                                                                                                    gccgcTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGc                                                   <  1:339097/148‑1 (MQ=255)                                                                                                    gccgcTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGc                                                   >  2:339097/1‑148 (MQ=255)                                                                                                    gccgcTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCa                                                  >  7:100400/1‑149 (MQ=255)                                                                                                    gccgcTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCACCAGACGATCgg                                                                            <  5:195836/123‑1 (MQ=255)                                                                                                       gcTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGc                                                   >  4:42663/1‑145 (MQ=255)                                                                                                       gcTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGc                                                   <  3:42663/145‑1 (MQ=255)                                                                                                       gcTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGt                                               <  7:205208/149‑1 (MQ=255)                                                                                                         tCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGTGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTg                                              >  3:112478/1‑148 (MQ=255)                                                                                                            aGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATc                                          <  5:239933/149‑1 (MQ=255)                                                                                                              cccTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAg                                        <  8:100400/149‑1 (MQ=255)                                                                                                               ccTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAgg                                       <  7:64411/149‑1 (MQ=255)                                                                                                                cTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGc                                      >  3:189605/1‑149 (MQ=255)                                                                                                                   cAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGt                                    <  4:369114/148‑1 (MQ=255)                                                                                                                     gTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACg                                 >  5:161309/1‑149 (MQ=255)                                                                                                                      ttCCTGGCCCGCAACGGTCAGCCAGTGACCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGt                                >  1:174092/1‑149 (MQ=255)                                                                                                                        ccTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTc                               <  4:189605/148‑1 (MQ=255)                                                                                                                         cTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCt                             <  1:240304/149‑1 (MQ=255)                                                                                                                         cTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCt                             <  1:19436/149‑1 (MQ=255)                                                                                                                            gCCCGCAACGGTCAGCCAGTGACCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTgg                           <  2:174092/148‑1 (MQ=255)                                                                                                                              ccGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCa                        >  2:117574/1‑149 (MQ=255)                                                                                                                                       tCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGc               >  6:145497/1‑149 (MQ=255)                                                                                                                                          gCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCg            <  5:145497/149‑1 (MQ=255)                                                                                                                                              gTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCtcgtcg                                                            <  6:55819/97‑1 (MQ=255)                                                                                                                                              gTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCtcgtcg                                                            >  5:55819/1‑97 (MQ=255)                                                                                                                                              gTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACt        >  3:40492/1‑149 (MQ=255)                                                                                                                                                 gCCATCGGCCAGCGGCACCGCGAACTGGATATGTGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCa     <  4:112478/149‑1 (MQ=255)                                                                                                                                                 gCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTc      <  4:40492/148‑1 (MQ=255)                                                                                                                                                  ccATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAg    <  3:349876/149‑1 (MQ=255)                                                                                                                                                  ccATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAg    <  7:74944/149‑1 (MQ=255)                                                                                                                                                    aTCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAggg  >  1:65939/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                    GCACAGGCGCACGGCAACCAGGCACACCAGCAACACCGCGACGATGCGCAGCGCATACACCCGCAGCAGGTAATCGCTGATCAGCACCCAGGCCGACTCGCCGCTCCAGCCCTGCAGTTCCTGGCCCGCAACGGTCAGCCAGTGGCCATCGGCCAGCGGCACCGCGAACTGGATATGCGCCTGGGCCGTGCGCAGGCCGAACAGGCTGCGCCAGACGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGG  >  NC_002947/328644‑328939

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.