| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 468712 | 64 (1.060) | 4 (0.070) | 4/246 | NT | 6.2% | coding (2245/3744 nt) | PP_0386 | sensory box protein |
| ? | NC_002947 | = 468784 | 61 (1.100) | coding (2173/3744 nt) | PP_0386 | sensory box protein | |||||
GTGCTTGATGCTGGAGATGTCTGCAAAAACCGCCACGAAGTGGGTGATCTCGCGGTCGCTGTTGCGCACGGCGCTTATGGTCAGCCAGCTTGGGTAAAGTTCGCCGTTCTTGCGCTTGTTGTAGATTTCGCCCTGCCAGTGGCCCTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/468563‑468712‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccctcggcCAGACCCCGCGCCTGCTCGCCTCTGGCCAGCACGACAGCGCTTTCTACCTGGCCATGTGGCACCAGCTTACCGCCGAGGGCCACTGGCAGGGCGAAATCTACAACAAGCGCAAGAACGGCGAACTTTACCCAAGCTGGCTGA < NC_002947/468784‑468643 GTGCTTGATGCTGGAGATGTCTGCAAAAACCGCCACGAAGTGGGTGATCTCGCGGTCGCTGTTGCGCACGGCGCTTATGGTCAGCCAGCTTGGGTAAAGTTCGCCGTTCTTGCGCTTGTTGTAGATTTCGCCCTGCCAGTGGCCCTCGG > 6:334724/1‑149GTGCTTGATGCTGGAGATGTCTGCAAAAACCGCCACGAAGTGGGTGATCTCGCGGTCGCTGTTGCGCACGGCGCTTATGGTCAGCCAGCTTGGGTAAAGTTCGCCGTTCTTGCGCTTGTTGTAGATTTCGCCCTGCCAGTGGCCCTCGG < 8:338009/149‑1 TGATGCTGGAGATGTCTGCAAAAACCGCCACGAAGTGGGTGATCTCGCGGTCGCTGTTGCGCACGGCGCTTATGGTCAGCCAGCTTGGGTAAAGTTCGCCGTTCTTGCGCTTGTTGTAGATTTCGCCCTGCCAGTGG > 5:111612/1‑137 TGATGCTGGAGATGTCTGCAAAAACCGCCACGAAGTGGGTGATCTCGCGGTCGCTGTTGCGCACGGCGCTTATGGTCAGCCAGCTTGGGTAAAGTTCGCCGTTCTTGCGCTTGTTGTAGATTTCGCCCTGCCAGTGG < 6:111612/137‑1 CACGAAGTGGGTGATCTCGCGGTCGCTGTTGCGCACGGCGCTTATGGTCAGCCAGCTTGGGTAAAGTTCGCCGTTCTTGCGCTTGTTGTAGATTTCGCCCTGCCAGTGGCCCTCGGCCAGACCCCGCGCCTGCTCGCCTCTGGCCAGCA > 8:49457/1‑149 ATCTCGCGGTCGCTGTTGCGCACGGCGCTTATGGTCAGCCAGCTTGGGTAAAGTTCGCCGTTCTTGCGCTTGTTGTAGATTTCGCCCTGCCAGTGGCCCTCGGCCAGACCCCGCGCCTGCTCGCCTCTGGCCAGCACGACAGCGCTTTC > 8:185168/1‑149 GCGCTTATGGTCAGCCAGCTTGGGTAAAGTTCGCCGTTCTTGCGCTTGTTGTAGATTTCGCCCTGCCAGTGG > 1:256625/1‑72 GCGCTTATGGTCAGCCAGCTTGGGTAAAGTTCGCCGTTCTTGCGCTTGTTGTAGATTTCGCCCTGCCAGTGG < 2:256625/72‑1 CAGCCAGCTTGGGTAAAGTTCGCCGTTCTTGCGCTTGTTGTAGATTTCGCCCTGCCAGTGGCCCTCGGCCAGACCCCGCGCCTGCTCGCCTCTGGCCAGCACGACAGCGCTTTCTACCTGGCCATGTGGCACCAGCTTACCGCCGAGGG < 7:49457/149‑1 AGCCAGCTTGGGTAAAGTTCGCCGTTCTTGCGCTTGTTGTAGATTTCGCCCTGCCAGTGGCCCTCGGCCAGACCCCGCGCCTGCTCGCCTCTGGCCAGCACGACAGCGCTTTCTACCTGGCCATGTGGCACCAGCTTACCGCCGAGGGC < 7:185168/149‑1 aCTCGGACAGCCCCCGCGCCTGCACGCCTCTGGCCAGCACGACAGCGCTTTCTACCTGGCCATGTGGCACCAGCTTACCGCCGAGGCCCACTGGCAGGGCGAAATCTACACCCAGCGAAACAACGGCGAACTTTACCCAAGCAGGCTGA > 6:361811/2‑149 CCTCGGCCAGACCCCGCGCCTGCTCGCCTCTGGCCAGCACGACAGCGCTTTCTACCTGGCCATGTGGCACCAGCTTACCGCCGAGGGCCACTGGCAGGGCGAAATCTACAACAAGCGCAAGAACGGCGAACTTTACCCAAGCTGGCTGA < 6:64890/149‑1 GTGCTTGATGCTGGAGATGTCTGCAAAAACCGCCACGAAGTGGGTGATCTCGCGGTCGCTGTTGCGCACGGCGCTTATGGTCAGCCAGCTTGGGTAAAGTTCGCCGTTCTTGCGCTTGTTGTAGATTTCGCCCTGCCAGTGGCCCTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/468563‑468712‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccctcggcCAGACCCCGCGCCTGCTCGCCTCTGGCCAGCACGACAGCGCTTTCTACCTGGCCATGTGGCACCAGCTTACCGCCGAGGGCCACTGGCAGGGCGAAATCTACAACAAGCGCAAGAACGGCGAACTTTACCCAAGCTGGCTGA < NC_002947/468784‑468643 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |