New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	494303 =	56 (0.930)	3 (0.050)	3/252	NT	5.4%	coding (64/768 nt)	djlA	DnaJ‑like protein DjlA
	?	NC_002947	494360 =	52 (0.910)					coding (121/768 nt)	djlA	DnaJ‑like protein DjlA

CGGCCATCGCACTTGGCCAGGCGCCCGAGCATCACGAACAACAACTCGTCGTCGCGTAATGCAGGGCGCCCACCCAGGCGTTCGCGCATGTCTTCCCAGCCTTGCAAGCGCAGCCGGCGGTCGATGGCCTGCCCAAGCAACGCACCGAGCAAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/494457‑494303 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaaggcTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACGACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTG  >  NC_002947/494360‑494506                                                                                                                                                                                                                                                                                                                CGGCCATCGCACTTGGCCAGGCGCCCGAGCATCACGAACAACAACTCGTCGTCGCGTAATGCAGGGCGCCCACCCAGGCGTTCGCGCATGTCTTCCCAGCCTTGCAAGCGCAGCCGGCGGTCGATGGCCTGCCCAAGCAACGCACCGAG                                                                                                                                                           <  4:97958/149‑1  GGCCATCGCACTTGGCCAGGCGCCCGAGCATCACGAACAACAACTCCTCGTCTCGTAATGCAGGTCGCCCACCCAGGCGTTCGCGCATGTCTTCCCAGCCTTGCAAGCGCAGCCGGCGGTCGATGGCCTGCCCAAGCAACGCACCGAGC                                                                                                                                                          <  8:355944/149‑1   GCCATCGCACTTGGCCAGGCGCCCGAGCATCACGAACAACAACTCGTCGTCGCGTAATGCAGGGCGCCCACCCAGGCGTTCGCGCATGTCTTCCCAGCCTTGCAAGCGCAGCCGGCGGTCGATGGCCTGCCCAAGCAACGCACCGAGC                                                                                                                                                          >  6:377750/1‑148     CATCGCACTTGGCCAGGCGCCCGAGCATCACGAACAACAACTCGTCGTCGCGTAATGCAGGGCGCCCACCCAGGCGTTCGCGCATGTCTTCCCAGCCTTGCAAGCGCAGCCGGCGGTCGATGGCCTGCCCAAGCAACGCACCGAGCAAG                                                                                                                                                       <  7:323469/149‑1      ATCGCACTTGGCCAGGCGCCCGAGCATCACGAACAACAACTCGTCGTCGCGTAATGCAGGGCGCCCACCCAGGCGTTCGCGCATGTCTTCCCAGCCTTGCAAGCGCAGCCGGCGGTCGATGGCCTGCCCAAGCAACGCACCGAGCAAGG                                                                                                                                                      >  2:304157/1‑149                               ATCACGAACAACAACTCGTCGTCGCGTAATGCAGGGCGCCCACCCAGGCGTTCGCGCATGTCTTCCCAGCCTTGCAAGCGCAGCCGGCGGTCGATGGCCTGCCCAAGCAACGCACCGAGCAA                                                                                                                                                        >  6:66692/1‑122                               ATCACGAACAACAACTCGTCGTCGCGTAATGCAGGGCGCCCACCCAGGCGTTCGCGCATGTCTTCCCAGCCTTGCAAGCGCAGCCGGCGGTCGATCGCCTGCCCAAGCAACGCACCGAGCAA                                                                                                                                                        <  5:66692/122‑1                                                                                               CCCAGCCTTGCAAGCGCAGCCGGCGGTCGATGGCCTGCCCAAGCAACGCACCGAGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACGACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGT                                                             >  3:10270/1‑149                                                                                                  AGCCTTGCAAGCGCAGCCGGCGGTCGATGGCCTGCCCAAGCAACGCACCGAGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGT                                                                                                                          <  1:308847/85‑1                                                                                                  AGCCTTGCAAGCGCAGCCGGCGGTCGATGGCCTGCCCAAGCAACGCACCGAGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGT                                                                                                                          >  2:308847/1‑85                                                                                                                                                      CAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACGACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGC       <  1:290527/148‑1                                                                                                                                                       AAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACGACGAGTTGTTGTTCGTGATGCTC                                                                             <  7:166107/77‑1                                                                                                                                                       AAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACGACGAGTTGTTGTTCGTGATGCTC                                                                             >  8:166107/1‑77                                                                                                                                                        AGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACGACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCC    <  1:11773/149‑1                                                                                                                                                         GGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACGACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCT   >  3:265988/1‑149                                                                                                                                                          GCTGGGAAGACAGGCGCGAACGCCTGGGGGGGCGCCCTGCATTACGCGACGACGAGTTGTTGTTCGTGATGCTCGGGCGCCGGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTG  <  4:70424/149‑1                                                                                                                                                                                                                                                                                                                CGGCCATCGCACTTGGCCAGGCGCCCGAGCATCACGAACAACAACTCGTCGTCGCGTAATGCAGGGCGCCCACCCAGGCGTTCGCGCATGTCTTCCCAGCCTTGCAAGCGCAGCCGGCGGTCGATGGCCTGCCCAAGCAACGCACCGAGCAAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/494457‑494303 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaaggcTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACGACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTG  >  NC_002947/494360‑494506

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.