New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	494303 =	56 (0.930)	3 (0.050)	3/252	NT	5.4%	coding (64/768 nt)	djlA	DnaJ‑like protein DjlA
	?	NC_002947	494360 =	52 (0.910)					coding (121/768 nt)	djlA	DnaJ‑like protein DjlA

AGTCTCTGATTGGCGAGCGCGCCTGACATGTGGTGGCCAGGCACGGTGATAGGCGTGGGTGCCGGCTTTGC‑CGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGA  >  NC_002947/494213‑494508                                                                                                                                                     |                                                                                                                                                      aGTCTCTGATTGGCGAGCGCGCCTGACATGTGGTGGCCAGGCACGGTGATAGGCGGGGGTGCCGGCTTTGC‑CGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTg                                                                                                                                                      <  6:375421/149‑1 (MQ=255)  gTCTCTGATTGGCGAGCGCGCCTGACCTGTGGTGGCCAGGCACGGTGATAGGCGTGGGTGCCGGCTTTGC‑CGGTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTgg                                                                                                                                                     <  8:152427/149‑1 (MQ=255)    acttggccaggcgcccgagcatcacgaacaacaactcgtcgtcgcgtaatgcagggcgcccacccaggcgttcgcgcatgtcttcccaGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTggg                                                                                                                                                    >  3:10270‑M1/89‑149 (MQ=255)       tGATTGGCGAGCGCGCCTGACATGTGGTGGCCAGGCACGGTGATAGGCGTGGGTGCCGGCTTTGC‑CGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGa                                                                                                                                                >  2:11773/1‑149 (MQ=255)        gATTGGCGAGCGCGCCTGACATGTGGTGGCCAGGCACGGTGATAGGCGTGGGTGCCGGCTTTGC‑CGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGa                                                                                                                                                >  3:70424/1‑148 (MQ=255)                     gcCTGACATGTGGTGGCCAGGCACGGTGATAGGCGTGGGTGCCGGCTTTGC‑CGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGcc                                                                                                                                  >  8:18712/1‑149 (MQ=255)                     gcCTGACATGTGGTGGCCAGGCACGGTGATAGGCGTGGGTGCCGGCTTTGC‑CGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGcc                                                                                                                                  >  5:20077/1‑149 (MQ=255)                       cTGACATGTGGTGGCCAGGCACGGTGATAGGCGTGGGTGCCGGCTTTGC‑CGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCtg                                                                                                                                <  7:137460/149‑1 (MQ=255)                          aCATGTGGTGGCCAGGCACGGTGATAGGCGTGGGTGCCGGCTTTGC‑CGTTGGGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGTCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCtggg                                                                                                                              <  6:248458/148‑1 (MQ=255)                          aCATGTGGTGGCCAGGCACGGTGATAGGCGTGGGTGCCGGCTTTGC‑CGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCtgg                                                                                                                               <  5:50938/147‑1 (MQ=255)                            aTGTGGTGGCCAGGCACGGTGATAGGCGTGGGTGCCGGCTTTGC‑CGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCtgggtgg                                                                                                                           >  5:377750/1‑149 (MQ=255)                            aTGTGGTGGCCAGGCACGGTGATAGGCGTGGGTGCCGGCTTTGC‑CGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCtgggtgg                                                                                                                           <  5:89281/149‑1 (MQ=255)                                  tgtccAGGCACGTTGATAGGCGTGTGTGCCGGCTTTGC‑CGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAATACATGCGCGAACGCCTGGGTGGGCGccc                                                                                                                     <  6:184123/146‑1 (MQ=255)                                      cAGGCACGGTGATAGGCGTGGGTGCCGGCTTTGC‑CGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCa                                                                                                                 >  4:276891/1‑149 (MQ=255)                                        ggCACGGTGATAGGCGTGGGTGCCGGCTTTGC‑CGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCAt                                                                                                                >  3:351722/1‑148 (MQ=255)                                           aCGGTGATAGGCGTGGGTGCCGGCTTTGC‑CGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATgcgc                                                                                                                                         >  5:373438/1‑120 (MQ=255)                                           aCGGTGATAGGCGTGGGTGCCGGCTTTGC‑CGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATgcgc                                                                                                                                         <  6:373438/120‑1 (MQ=255)                                             ggTGATAGGCGTGGGTGCCGGCTTTGCTCGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTAcgc                                                                                                           >  1:201626/1‑149 (MQ=255)                                             ggTGATAGGCGTGGGTGCCGGCTTTGC‑CGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTAcgcg                                                                                                          >  8:133550/1‑149 (MQ=255)                                                gATAGGCGTGGGTGCCGGCTTTGC‑CGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGcgac                                                                                                        >  2:85474/1‑148 (MQ=255)                                                       gggggTGCCGGCTTTGC‑CGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGTCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTg                                                                                                                   <  2:201413/128‑1 (MQ=255)                                                       gTGGGTGCCGGCTTTGC‑CGTTGCGACGATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTg                                                                                                                   >  1:201413/1‑130 (MQ=255)                                                       gTGGGGTCCGGCTTTCC‑CGTTGCGAGCATACCGGGTGCCTTGCGCGGTGCGGGGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAgtt                                                                                               <  4:300593/149‑1 (MQ=255)                                                           gTGCCGGCTTTGC‑CGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGaa                                                                                                                                      <  8:332911/107‑1 (MQ=255)                                                           gTGCCGGCTTTGC‑CGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGaa                                                                                                                                      >  7:332911/1‑107 (MQ=255)                                                             gCCGGCTTTGC‑CGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAgttgttgtt                                                                                         >  7:149948/1‑149 (MQ=255)                                                              ccGGCTTTGC‑CGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTc                                                                                        >  3:157704/1‑149 (MQ=255)                                                                 acccaggcgttcgcgcatgtcttcccaGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCt                                                                                                                                                       >  2:308847‑M1/28‑85 (MQ=255)                                                                 acccaggcgttcgcgcatgtcttcccaGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCt                                                                                                                                                       <  1:308847‑M1/58‑1 (MQ=255)                                                                   tttGC‑CGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGAt                                                                                   >  1:216532/1‑149 (MQ=255)                                                                       c‑cGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGc                                                                                                                  >  7:233333/1‑115 (MQ=255)                                                                       c‑cGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGc                                                                                                                  <  8:233333/115‑1 (MQ=255)                                                                       c‑cGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTc                                                                               <  7:18712/149‑1 (MQ=255)                                                                           ttGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCtgggtgg                                                                                                                           >  5:84851/1‑103 (MQ=255)                                                                           ttGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCtgggtgg                                                                                                                           <  6:84851/103‑1 (MQ=255)                                                                                aGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAgttg                                                                                              <  4:335413/126‑1 (MQ=255)                                                                                aGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAgttg                                                                                              >  3:335413/1‑126 (MQ=255)                                                                                   aTACCGGGTGCCTTGCTCGATGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCggg                                                                            <  3:25568/141‑1 (MQ=255)                                                                                      ccGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCaa                                                                 <  1:85474/149‑1 (MQ=255)                                                                                       cGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACGAACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCaa                                                                 <  1:65656/149‑1 (MQ=255)                                                                                       cGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAg                                                                >  5:88431/1‑149 (MQ=255)                                                                                        cccagccttgcaagcgcagccggcggtcgatggcctgcccaagcaacgcaccgagcaaggcTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGt                                                               >  3:10270‑M2/62‑149 (MQ=255)                                                                                           agccttgcaagcgcagccggcggtcgatggcctgcccaagcaacgcaccgagcaaggcTGGGAAGACATGCGCGAACGCCtgggt                                                                                                                             <  1:308847‑M2/27‑1 (MQ=255)                                                                                           agccttgcaagcgcagccggcggtcgatggcctgcccaagcaacgcaccgagcaaggcTGGGAAGACATGCGCGAACGCCtgggt                                                                                                                             >  2:308847‑M2/59‑85 (MQ=255)                                                                                             CCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGAt                                                          >  2:304157‑M1/1‑149 (MQ=255)                                                                                              CTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATg                                                         <  7:323469‑M1/149‑1 (MQ=255)                                                                                               TTGCTCGGTGCGTTGCTTGGGCAGGCGATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGAt                                                                                   <  5:66692‑M1/122‑1 (MQ=255)                                                                                               TTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGAt                                                                                   >  6:66692‑M1/1‑122 (MQ=255)                                                                                                 GCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGc                                                       >  6:377750‑M1/1‑148 (MQ=255)                                                                                                 GCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGACCTGCATTACGAGACG‑AGGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGcc                                                      <  8:355944‑M1/149‑1 (MQ=255)                                                                                                  CTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCg                                                     <  4:97958‑M1/149‑1 (MQ=255)                                                                                                    cGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCggg                                                   >  7:69553/1‑149 (MQ=255)                                                                                                     ggTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGTTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCgg                                                    <  1:124720/147‑1 (MQ=255)                                                                                                     ggTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCgg                                                    <  2:201626/147‑1 (MQ=255)                                                                                                             gCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGag                                           <  3:276891/148‑1 (MQ=255)                                                                                                              cTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGagca                                         <  6:20077/149‑1 (MQ=255)                                                                                                               ttGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGagcag                                        >  5:326345/1‑149 (MQ=255)                                                                                                               ttGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGagcag                                        >  5:274896/1‑149 (MQ=255)                                                                                                                   gCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCata                                    <  4:157704/149‑1 (MQ=255)                                                                                                                     aGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATc                                  <  4:351722/149‑1 (MQ=255)                                                                                                                     aGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATc                                  <  6:88431/149‑1 (MQ=255)                                                                                                                        ccATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCcag                               >  2:290527/1‑149 (MQ=255)                                                                                                                          aTCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCGCTGCATTACGCGACG‑ACGAGTTGTAGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCcag                               >  6:359252/1‑147 (MQ=255)                                                                                                                          aTCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCcag                               >  4:320551/1‑147 (MQ=255)                                                                                                                          aTCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCcag                               >  4:116572/1‑147 (MQ=255)                                                                                                                           tCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCcagcag                            <  8:323469/149‑1 (MQ=255)                                                                                                                             gACCGCCGGCTGCGCTTGGAAGGCTGGTAAGACATGCTGGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑TCGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGgc                          <  3:281836/149‑1 (MQ=255)                                                                                                                                         cgcTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGgag                <  3:320551/147‑1 (MQ=255)                                                                                                                                          gcTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATg             >  3:343786/1‑149 (MQ=255)                                                                                                                                            ttGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGt           >  8:150766/1‑149 (MQ=255)                                                                                                                                               caaggcTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTgc         <  1:290527‑M2/142‑1 (MQ=255)                                                                                                                                                aaggcTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTc                                                                               <  7:166107‑M2/72‑1 (MQ=255)                                                                                                                                                aaggcTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTc                                                                               >  8:166107‑M2/6‑77 (MQ=255)                                                                                                                                                 aggcTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGcc      <  1:11773‑M2/145‑1 (MQ=255)                                                                                                                                                  ggcTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCt     >  3:265988‑M2/4‑149 (MQ=255)                                                                                                                                                   gcTGGGAAGACAGGCGCGAACGCCTGGGGGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCGGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTg    <  4:70424‑M2/147‑1 (MQ=255)                                                                                                                                                     tGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGagc                                          <  2:114890/109‑1 (MQ=255)                                                                                                                                                     tGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGagc                                          >  1:114890/1‑109 (MQ=255)                                                                                                                                                     tGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGa  >  8:273358/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                      AGTCTCTGATTGGCGAGCGCGCCTGACATGTGGTGGCCAGGCACGGTGATAGGCGTGGGTGCCGGCTTTGC‑CGTTGCGAGCATACCGGGTGCCTTGCTCGGTGCGTTGCTTGGGCAGGCCATCGACCGCCGGCTGCGCTTGCAAGGCTGGGAAGACATGCGCGAACGCCTGGGTGGGCGCCCTGCATTACGCGACG‑ACGAGTTGTTGTTCGTGATGCTCGGGCGCCTGGCCAAGTGCGATGGCCGGGTAGCCGAGCAGCATATCCAGCAGGCGCGTCAGGAGATGGTGCGCCTGGA  >  NC_002947/494213‑494508

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.