| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 567334 | 70 (1.160) | 4 (0.070) | 4/252 | NT | 5.9% | coding (2162/2835 nt) | uvrA | uvrABC excinuclease protein A |
| ? | NC_002947 | = 567358 | 61 (1.070) | coding (2138/2835 nt) | uvrA | uvrABC excinuclease protein A | |||||
CGGTTGTAGCGCTTGCTCTTGCACACGTCACACGGCACGTAGATGTCCGGCAGGAAGTGCATTTCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/567181‑567334‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgagcTGTTCTCCGGTGTCCCGGAGTCACGCTCGCGTGGTTATGGCCCGGGGCGTTTCTCGTTCAACGTCAAGGGTGGCCGTTGCGAGGCCTGCCAGGGCGATGGCCTGATCAAGGTGGAAATGCACTTCCTGCCGGACATCTACGTGCCG < NC_002947/567358‑567213 CGGTTGTAGCGCTTGCTCTTGCACACGTCACACGGCACGTAGATGTCCGACAGGAAGTGCATTTCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACG < 1:88334/149‑1CGGTTGTAGCGCTTGCTCTTACTCACGTGACACGGCACGTAGATGTCCGGCAGGAAGTGCATTTCCTCGTTTATCAGGCCATCGCCCTGGCAGTCCTCGCAAAGGCCACCCTTGAGGTTGAACGAGAAACGCCCCGGGCCATAACCACG < 4:44232/149‑1 TTGTAGCGCTTGCTCTTGCACACGTCACACGGCACGTAGATGTCCGGCAGGAAGTGCATTTCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGA < 4:198595/149‑1 GTAGCGCTTGCTCTTGCACACGTCACACGGCACGTAGATGTCCGGCAGGAAGTGCATTTCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGC < 1:134364/149‑1 TTGCTCTTGCACACGTCACACGGCACGTAGATGTCCGGCAGGAAGTGCATTTCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCTGTTCTC > 3:218084/1‑149 CGTAGATGTCCGGCAGGAAGTGCATTTCCACCTTGATCAGGCCATCGCCCTGGGAGGCCTCGCAACGGCCACCCTTGACGTTGATCGAGAAACGCCCCGGGCCATAACCACGCGAGCTGTTCTCCGGTGTCCCGGAGTCACGCTCGCGT < 4:218084/149‑1 GTAGATGTCCGGCAGGAAGTGCATTTCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCTGTTCTCCGGTGTCCCGGAGTCACGCTCGC < 5:241265/146‑1 GTAGATGTCCGGCAGGAAGTGCATTTCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCTGTTCTCCGGTGTCCCGGAGTCACGCTCGC > 6:241265/1‑146 CGCGAGCTGTTCTCCGGTGTCCCGGAGTCACGCTCGCGTGGTTATGGCCCGGGGCGTTTCTCGTTCAACGTCAAGGGTGGCCGTTGCGAGGCCTGCCAGGGCGATGGCCTGATCAAGGTGGAAATGCACTTCCTGCCGGACATCTACGT < 8:271629/149‑1 GCGAGCTGTTCTCCGGTGTCCCGGAGTCACGCTCGCGTGGTTATGGCCCGGGGCGTTTCTCGTTCAACGTCAAGGGTGGCCGTTGCGAGGCCTGCCAGGGCGATGGCCTGATCAAGGTGGAAA > 5:197679/1‑123 GCGAGCTGTTCTCCGGTGTCCCGGAGTCACGCTCGCGTGGTTATGGCCCGGGGCGTTTCTCGTTCAACGTCAAGGGTGGCCGTTGCGAGGCCTGCCAGGGCGATGGCCTGATCAAGGTGGAAA < 6:197679/123‑1 AGCTGTTCTCCGGTGTCCCGGAGTCACGCTCGCGTGGTTATGGCCCGGGGCGTTTCTCGTTCAACGTCAAGGGTGGCCGTTGCGAGGCCTGCCAGGGCGATGGCCTGATCAAGGTGGAAATGCACTTCCTGCCGGACATCTACGTGCCG > 2:531/1‑149 CGGTTGTAGCGCTTGCTCTTGCACACGTCACACGGCACGTAGATGTCCGGCAGGAAGTGCATTTCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/567181‑567334‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgagcTGTTCTCCGGTGTCCCGGAGTCACGCTCGCGTGGTTATGGCCCGGGGCGTTTCTCGTTCAACGTCAAGGGTGGCCGTTGCGAGGCCTGCCAGGGCGATGGCCTGATCAAGGTGGAAATGCACTTCCTGCCGGACATCTACGTGCCG < NC_002947/567358‑567213 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |