New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 56733470 (1.160)4 (0.070) 4/252 NT 5.9% coding (2162/2835 nt) uvrA uvrABC excinuclease protein A
?NC_002947 = 567358 61 (1.070)coding (2138/2835 nt) uvrA uvrABC excinuclease protein A

CGGCACGTAGATGTCCGGCAGGAAGTGCATTTCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATCCACCACCTTGTCCAGGTGCTGCAGGCCGTCCATGCTGCTGTGCGGTGCGGCTTCCAGGCTGCTTGC  >  NC_002947/567213‑567506
                                                                                                                                                 |                                                                                                                                                    
cGGCACGTAGATGTCCGGCAGGAAGTGCATTTCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAgct                                                                                                                                                   >  2:531‑M2/1‑146 (MQ=255)
    aCGTAGATGTCCGGCAGGAAGTGCATTTCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAgctcgcg                                                                                                                                               <  8:271629‑M2/149‑8 (MQ=255)
     cGTAGATGTCCGGCAGGAAGTGCATTTCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCgg                                                                                                                                              <  5:353257/149‑1 (MQ=255)
     cGTAGATGTCCGGCAGGAAGTGCATTTCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCgg                                                                                                                                              <  5:175531/149‑1 (MQ=255)
        aGATGGCCGGCAGGAAGTGCATTTCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGTGAACAGCTCGCGGATc                                                                                                                                           >  2:257367/1‑149 (MQ=255)
         gATGTCCGGCAGGAAGTGCATTTCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATc                                                                                                                                           <  1:366246/148‑1 (MQ=255)
           tGTCCGGCAGGAAGTGCATTTCCACCTTGATCACGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGTGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGc                                                                                                                                        <  6:243037/149‑1 (MQ=255)
            gTCCGGCAGGAAGTGCATTTCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCg                                                                                                                                       >  1:180726/1‑149 (MQ=255)
             tCCGGCAGGAAGTGCATTTCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGt                                                                                                                                      <  7:271629/149‑1 (MQ=255)
             tCCGGCAGGAAGTGCATTTCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGt                                                                                                                                      <  5:28400/149‑1 (MQ=255)
             tCCGGCAGGAAGTGCATTTCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGt                                                                                                                                      >  2:219570/1‑149 (MQ=255)
              cccgCACGAAGAGCATTTACACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGt                                                                                                                                      <  8:72825/145‑1 (MQ=255)
               cGGCAGGAAGTGCATTTCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTg                                                                                                                                     >  7:186998/1‑148 (MQ=255)
               cGGCAGGAAGTGCATTTCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTg                                                                                                                                     >  3:43359/1‑148 (MQ=255)
                ggCAGGAAGTGCATTTCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGaa                                                                                                                                   <  7:11634/149‑1 (MQ=255)
                 gCAGGAAGTGCATTTCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAg                                                                                                                                  <  8:239556/149‑1 (MQ=255)
                  cAGGAAGTGCATTTCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGa                                                                                                                                 <  4:43359/149‑1 (MQ=255)
                        gTGCATTTCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCgg                                                                                                                           >  5:97777/1‑149 (MQ=255)
                           cATTTCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGgtg                                                                                                                         >  4:627/1‑148 (MQ=255)
                             tttCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAgctcgc                                                                                                                                                <  6:197679‑M2/123‑7 (MQ=255)
                             tttCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAgctcgc                                                                                                                                                >  5:197679‑M2/1‑117 (MQ=255)
                                       gATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCggg                                                                                                             <  4:74409/148‑1 (MQ=255)
                                        aTCACGACATCGCCCTTGCAGTCCTCGCACCGGCCACCCTTGACGTTGAACGAGAAACCCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGGGGCCGGGtt                                                                                                           <  8:346721/149‑1 (MQ=255)
                                             gCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGc                                                                                                      <  1:219570/149‑1 (MQ=255)
                                              ccATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCg                                                                                                     >  1:96175/1‑149 (MQ=255)
                                               cATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCgt                                                                                                    >  3:167271/1‑149 (MQ=255)
                                                aTCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCgtg                                                                                                   <  3:627/149‑1 (MQ=255)
                                                aTCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCgtg                                                                                                   <  2:130944/149‑1 (MQ=255)
                                                 tCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCgtgg                                                                                                  <  1:341760/149‑1 (MQ=255)
                                                 tCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCgtgg                                                                                                  >  2:283390/1‑149 (MQ=255)
                                                     ccTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGc                                                                                                                              <  6:369339/117‑1 (MQ=255)
                                                      cTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGc                                                                                             <  4:167271/149‑1 (MQ=255)
                                                                      cGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTg                                                                             >  5:309222/1‑149 (MQ=255)
                                                                          cACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCggg                                                                                  <  4:346014/140‑1 (MQ=255)
                                                                          cACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGACGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTc                                                                          >  5:56307/1‑148 (MQ=255)
                                                                          cACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCCTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCggg                                                                                  >  3:346014/1‑140 (MQ=255)
                                                                           aCCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCgt                                                                        <  2:351105/149‑2 (MQ=255)
                                                                            cccTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGa                                                                        >  1:26255/1‑148 (MQ=255)
                                                                             ccTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGa                                                                        >  5:265411/1‑147 (MQ=255)
                                                                             ccTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGa                                                                        <  6:265411/147‑1 (MQ=255)
                                                                               ttGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGt                                                                           <  2:269968/142‑1 (MQ=255)
                                                                               ttGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGt                                                                           >  1:269968/1‑142 (MQ=255)
                                                                                 gACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATcc                                                                   <  6:124951/148‑1 (MQ=255)
                                                                                       gAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATCCaccacc                                                             <  2:96175/148‑1 (MQ=255)
                                                                                          cGAGAAACGCCCCGGGCCATAACCACGCGAGTGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATCCACCACCTTGt                                                         >  6:153404/1‑149 (MQ=255)
                                                                                           gagaAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATCCACCACCTTGTc                                                        <  1:283390/149‑1 (MQ=255)
                                                                                           gagaAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATCCACCACCTTGTc                                                        >  5:57920/1‑149 (MQ=255)
                                                                                                aCGCCCCGGGCCATAACCACGCGATCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATCCACCACCTTGTCCAGGt                                                   <  6:56307/149‑1 (MQ=255)
                                                                                                   ccccGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATCCACCACCTTGTCCAGGtgct                                                >  8:110483/1‑149 (MQ=255)
                                                                                                      cGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATCCACCACCTTGTCCAGGtgctg                                               >  7:144110/1‑147 (MQ=255)
                                                                                                       gggCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATCCACCACCTTGTCCAGGTGCTGCAg                                            <  4:211454/149‑1 (MQ=255)
                                                                                                         gCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATCCACCACCTTGTCCAGGTGCTGCAGGc                                          >  6:78185/1‑149 (MQ=255)
                                                                                                           cATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATCCACCACCTTGTCCAGGTGCTGCAGGCCg                                        >  1:56985/1‑149 (MQ=255)
                                                                                                               aCCACGCGAGTGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATCCACCACCTTGTCCAGGTGCTGCAGGCCGTcc                                     <  5:153404/148‑1 (MQ=255)
                                                                                                                ccACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGata                                                                      >  8:2335/1‑114 (MQ=255)
                                                                                                                ccACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGata                                                                      <  7:2335/114‑1 (MQ=255)
                                                                                                                 cACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCgg                                                                                           >  6:203522/1‑92 (MQ=255)
                                                                                                                 cACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATCCACCACCTTGTCCAGGTGCTGCAGGCCGTCCAtg                                  >  2:184624/1‑149 (MQ=255)
                                                                                                                 cACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATCCACCACCTTGTCCAGGTGCTGCAGGCCGTCCAtg                                  >  4:139164/1‑149 (MQ=255)
                                                                                                                 cACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATCCACCACCTTGTCCAGGTGCTGCAGGCCGTCCAtg                                  <  6:97777/149‑1 (MQ=255)
                                                                                                                  aCGCGAGCGTGACTCCGGGACACCGGAGAACAgctcgcgtggttatggcccggggcgtttctcgatcaacgtcaagggtggccgttgcgaggcctcccagggcgatggcctgatcaaggtggaaatgcacttcctgccggacatctacg                                 <  4:218084‑M2/149‑118 (MQ=255)
                                                                                                                    gcgAGCGTGACTCCGGGACACCGGAGAACAgctcgcgtggttatggcccggggcgtttctcgttcaacgtcaagggtggccgttgcgaggcctgccagggcgatggcctgatcaaggtggaaatgcacttcctgccggacatctac                                  <  5:241265‑M2/146‑117 (MQ=255)
                                                                                                                    gcgAGCGTGACTCCGGGACACCGGAGAACAgctcgcgtggttatggcccggggcgtttctcgttcaacgtcaagggtggccgttgcgaggcctgccagggcgatggcctgatcaaggtggaaatgcacttcctgccggacatctac                                  >  6:241265‑M2/1‑30 (MQ=255)
                                                                                                                          gTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATCCACCACCTTGTCCAGGTGCTGCAGGCCGTCCATGCTGCTgtgc                         <  2:180726/149‑1 (MQ=255)
                                                                                                                                 cGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATCCACCACCTTGTCCAGGTGCTGCAGGCCGTCCATGCTGCTgtgcggtgcg                   <  2:341212/148‑1 (MQ=255)
                                                                                                                                 cGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATCCACCACCTTGTCCAGGTGCTGCAGGCCGTCCATGCTGCTGtgcggtgcgg                  >  5:242220/1‑149 (MQ=255)
                                                                                                                                      cacCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATCCACCACCTTGTCCAGGTGCTGCAGGCCGTCCATGCTGCTGTGCGGTGCGGCTTcc             <  7:110483/149‑1 (MQ=255)
                                                                                                                                       acCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATCCACCACCTTGTCCAGGTGCTGCAGGCCGTCCATGCTGCTGTGCGGTGCGGCTTc              >  5:187365/1‑147 (MQ=255)
                                                                                                                                        ccGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATCCACCACCTTGTCCAGGTGCTGCAGGCCGTCCATGCTGCTGTGCGGTGCGGCTTCCAg           <  6:355486/149‑1 (MQ=255)
                                                                                                                                         cGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATCCACCACCTTGTCCAGGTGCTGCAGGCCGTCCATGCTGCTGTGCGGTGCGGCTTCCAgg          >  3:121741/1‑149 (MQ=255)
                                                                                                                                          ggAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATCCACCACCTTGTCCAGGTGCTGCAGGCCGTCCATGCTGCTGTGCGGTGCGGCTTCCAGgc         <  7:188495/149‑1 (MQ=255)
                                                                                                                                          ggAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATCCACCACCTTGTCCAGGTGCTGCAGGCCGTCCATGCTGCTGTGCGGTGCGGCTTCCAGgc         >  6:245596/1‑149 (MQ=255)
                                                                                                                                           gagaACAgctcgcgtggttatggcccggggcgtttctcgttcaacgtcaagggtggccgttgcgaggcctgccagggcgatggcctgatcaaggtggaaatgcacttcctgccggacatctacgtgccgtgtgacgtgtgcaagagcaa        >  3:218084‑M2/1‑7 (MQ=255)
                                                                                                                                                cAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATCCACCACCTTGTCCAGGTGCTGCAGGCCGTCCATGCTGCTGTGCGGTGCGGCTTCCAGGCTGCTTg   >  3:193688/1‑149 (MQ=255)
                                                                                                                                                 aGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATCCACCACCTTGTCCAGGTGCTGCAGGCCGTCCATGCTGCTGTGCGGTGCGGCTTCCAGGCTGCTTgc  <  4:121741/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
CGGCACGTAGATGTCCGGCAGGAAGTGCATTTCCACCTTGATCAGGCCATCGCCCTGGCAGGCCTCGCAACGGCCACCCTTGACGTTGAACGAGAAACGCCCCGGGCCATAACCACGCGAGCGTGACTCCGGGACACCGGAGAACAGCTCGCGGATCGGCGTGAAGATGCCGGTGTAGGTGGCCGGGTTGGAGCGTGGTGTGCGGCCGATCGGGCTCTGGTCGATATCCACCACCTTGTCCAGGTGCTGCAGGCCGTCCATGCTGCTGTGCGGTGCGGCTTCCAGGCTGCTTGC  >  NC_002947/567213‑567506

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.