| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 668081 | 43 (0.710) | 5 (0.100) | 5/218 | NT | 13.7% | intergenic (+45/+107) | yfhM/PP_0571 | lipoprotein/membrane protein |
| ? | NC_002947 | = 668150 | 28 (0.570) | intergenic (+114/+38) | yfhM/PP_0571 | lipoprotein/membrane protein | |||||
CCTGGCGCGAGCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATG‑TACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/667913‑668081‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcggccttgcgtcgcgaCAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACACTTTCCGCGTAGAGCGGGTCTCTAGCGGGCTTTCACCGTCATCTCCC < NC_002947/668150‑668011 CCTGGCGCGAGCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATG‑TACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTG < 5:92528/149‑1CCTGGCGCGAGCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATG‑TACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGT < 3:19008/148‑1 GCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATG‑TACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCT > 1:139731/1‑149 CAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATG‑TACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTT > 4:19796/1‑149 GTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATGTTACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTG > 1:87745/1‑149 cCCCCGGGCACCTCCCGCGTGCCGCCGCCGCCGGTCGCATCGCTG‑TCCCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGAGGACGGGGACAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTC < 4:285965/148‑1 ACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATG‑TACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTC > 3:95741/1‑149 CCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATG‑TACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCG < 4:95741/149‑1 CCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATG‑TACCGGCCGAACCTGCAGGCCGTGGGCGATCGGCAAGGGGAGATGACGTTGAAAGCCCGCTAGAGACCCGCACTACGCGGAAAGAGTG > 4:223487/1‑131 CCCGGGCACCTACCGCGTGCCGCAGCCGCAGGTCGAATCTATG‑TACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTG < 3:223487/131‑1 CGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATG‑TACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGA > 2:112173/1‑149 ATCGATG‑TACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCG < 3:300130/112‑1 ATCGATG‑TACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCG > 4:300130/1‑112 CCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTG > 5:90468/1‑148 ACCTGAAGGCCGTGTGCGATGGGAAAGGGGAGATGACTGTGCACGCCCGCTAGAGACCCGCTCTAAGCGGAAAGTGTGGGAGCGGCCTTGCGTCGAGATAGGGCTGCACAGCATCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTC < 3:218756/147‑1 GCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCC < 6:10217/149‑1 AGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGAC < 7:204682/149‑1 GATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGG < 6:90468/149‑1 tggGGGAGCGGCCTGGCGTCGCCACTGGGCTGCACAGCAGCCCCAGCCTTTCAGCTTCGCCGCTTGAATTGGCGGGGCCGCTTGGCGGCCCTACCGCCACGCAAGGCCGCTCCCACACTTTCCGCGTAGAGCGGGTCTCTAGCGGGCT < 3:105246/145‑1 GAGCGGCCTTCCGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTGCAGCTTCGCCGCTTCAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACACTTTCCGCGTAGAGCGGGTCTCTAGCGGGCTTTCACC < 5:305204/149‑1 CCTTGCGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACACTTTCCGCGTAGAGCGGGTCTCTAGCGGGCTTTCACCGTCATC > 4:36464/1‑149 CCTTGCGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACACTTTCCGCGTAGAGCGGGTCTCTAGCGGGCTTTCACCGTCATC > 2:21697/1‑149 CCTTGCGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCGCCCACCCTTTCCGAGTAGAGCGGGTCTCTAGCGGGCTTTCACCGTCATC > 6:292357/1‑149 CGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACACTTTCCGCGTAGAGCGGGTCTCTAGCGGGCTTTCACCGTCATCTCCC < 1:21697/148‑1 CCTGGCGCGAGCAGTGACCCCGGGCACCTACCGCGTGCCGCCGCCGCAGGTCGAATCGATG‑TACCGGCCGAACCTGCAGGCCGTGGGCGATGGGCAAGGGGAGATGACGGTGAAAGCCCGCTAGAGACCCGCTCTACGCGGAAAGTGTGGGAGCGGCCTTGCGTCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/667913‑668081‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcggccttgcgtcgcgaCAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACACTTTCCGCGTAGAGCGGGTCTCTAGCGGGCTTTCACCGTCATCTCCC < NC_002947/668150‑668011 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |