New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 818994	48 (0.800)	3 (0.050)	3/262	NT	5.2%	coding (148/627 nt)	PP_0705	DNA‑3‑methyladenine glycosylase
	?	NC_002947	= 819030	62 (1.050)					coding (184/627 nt)	PP_0705	DNA‑3‑methyladenine glycosylase

CATGATGCTGGCCGACCTTTCGCCTGAGGCCTATCACGAGGCCGCGCAACACCTGGCGGCACTTGACCCGGACTGGTCACGGCATATCGCAGCGATCGGGCCCTGCCTGCACCAGGCTACGCCGGGACGTGAGCCTTATGAGGCATTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/818846‑818994 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggCGCGGGCGTGCAGTTGCTGGTAGGCAATCGCCCGCACCAATGC  <  NC_002947/819030‑818988                                                                                                                                                                                                  CATGATGCTGGCCGACCTTTCGCCTGAGGCCTATCACGAGGCCGCGCAACACCTGGCGGCACTTGACCCGGACTGGTCACGGCATATCGCAGCGATCGGGCCCTGCCTGCACCAGGCTACGCCGGGACGTGAGCCTTATGAGGCATTGG                                             <  2:275685/149‑1 CATGATGCTGGCCGACCTTTCGCCTGAGGCCTATCACGAGGCCGCGCAACACCTGGCGGCACTTGACCCGGACTGGTCACGGCATATCGCAGCGATCGGGCCCTGCCTGCACCAGGCTACGCCGGGACGTGAGCCTTATGAGGCATTGG                                             >  3:258154/1‑149                                         GCCGCGCAACACCTGGCGGCAATTGACCCGGACTGGTGACGGCATATCTCAGCGATCTGGCCCTGCCTGCACCAGGCTACGCCGGGACGTGAGCCTTATGAGTCATTGGCGCGGGCGTGCAGTTGCTGGTAGGCAATCGCCCGCACCAA     <  7:163800/149‑1                                          CCGCGCAACACCTGGCGGCACTTGACCCGGACTGGTCACGGCATATCGCAGCGATCGGGCCCTGCCTGCACCAGGCTACGCCGGGACGTGAGCCTTATGAGGCATTGGCGCGGGCGTGCAGTTGCTGGTAGGCAATCGCCCGCACCAAT    <  1:17898/149‑1                                            GCGCAACACCTGGCGGCACTTGACCCGGACTGGTCACGGCATATCGCAGCGATCGGGCCCTGCCTGCACCAGGCTACGCCGGGACGTGAGCCTTATGAGGCATTGGCGCGGGCGTGCAGTTGCTGGTAGGCAATCGCCCGCACCAATGC  <  7:199000/149‑1                                                                                                                                                                                                  CATGATGCTGGCCGACCTTTCGCCTGAGGCCTATCACGAGGCCGCGCAACACCTGGCGGCACTTGACCCGGACTGGTCACGGCATATCGCAGCGATCGGGCCCTGCCTGCACCAGGCTACGCCGGGACGTGAGCCTTATGAGGCATTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/818846‑818994 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggCGCGGGCGTGCAGTTGCTGGTAGGCAATCGCCCGCACCAATGC  <  NC_002947/819030‑818988

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.